Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813105Fold b.77: beta-Prism I [51091] (4 superfamilies)
    consists of 3 4-stranded sheets; strands are parallel to the 3-fold axis
    duplication: has internal pseudo threefold symmetry
  4. 2813155Superfamily b.77.3: Mannose-binding lectins [51101] (2 families) (S)
  5. 2813299Family b.77.3.0: automated matches [191397] (1 protein)
    not a true family
  6. 2813300Protein automated matches [190516] (5 species)
    not a true protein

Species:

  1. 2813301Musa acuminata [TaxId:4641] [187471] (10 PDB entries)
    1. Domains for 1x1v:
      1. 2813318Domain d1x1va_: 1x1v A: [162029]
        automated match to d1c3ka_
        complexed with hez, mma, zn
      2. 2813319Domain d1x1vb_: 1x1v B: [162030]
        automated match to d1c3ka_
        complexed with hez, mma, zn
    2. Domains for 2bmy:
      1. 2813326Domain d2bmya_: 2bmy A: [163126]
        automated match to d1c3ka_
        complexed with cd, so4
      2. 2813327Domain d2bmyb_: 2bmy B: [163127]
        automated match to d1c3ka_
        complexed with cd, so4
    3. Domains for 2bmz:
      1. 2813320Domain d2bmza_: 2bmz A: [163128]
        automated match to d1c3ka_
        complexed with cd, so4
      2. 2813321Domain d2bmzb_: 2bmz B: [163129]
        automated match to d1c3ka_
        complexed with cd, so4
    4. Domains for 2bn0:
      1. 2813324Domain d2bn0a_: 2bn0 A: [163130]
        automated match to d1c3ka_
        complexed with cd, so4
      2. 2813325Domain d2bn0b_: 2bn0 B: [163131]
        automated match to d1c3ka_
        complexed with cd, so4
    5. Domains for 3mit:
      1. 2813316Domain d3mita_: 3mit A: [181289]
        automated match to d1c3ka_
        complexed with hez, man, zn
      2. 2813317Domain d3mitb_: 3mit B: [181290]
        automated match to d1c3ka_
        complexed with hez, man, zn
    6. Domains for 3miu:
      1. 2813322Domain d3miua_: 3miu A: [181291]
        automated match to d1c3ka_
        complexed with hez, man, zn
      2. 2813323Domain d3miub_: 3miu B: [181292]
        automated match to d1c3ka_
        complexed with hez, man, zn
    7. Domains for 4pif:
      1. 2813312Domain d4pifa1: 4pif A:4-141 [278994]
        Other proteins in same PDB: d4pifa2, d4pifb2, d4pifc2, d4pifd2
        automated match to d2bmza_
        complexed with gol
      2. 2813313Domain d4pifb1: 4pif B:1-141 [278993]
        Other proteins in same PDB: d4pifa2, d4pifb2, d4pifc2, d4pifd2
        automated match to d2bmza_
        complexed with gol
      3. 2813314Domain d4pifc1: 4pif C:4-141 [278997]
        Other proteins in same PDB: d4pifa2, d4pifb2, d4pifc2, d4pifd2
        automated match to d2bmza_
        complexed with gol
      4. 2813315Domain d4pifd1: 4pif D:1-141 [279006]
        Other proteins in same PDB: d4pifa2, d4pifb2, d4pifc2, d4pifd2
        automated match to d2bmza_
        complexed with gol
    8. Domains for 4pik:
      1. 2813306Domain d4pika1: 4pik A:4-141 [278995]
        Other proteins in same PDB: d4pika2, d4pikb2, d4pikc2, d4pikd2
        automated match to d2bmza_
        complexed with gol, man
      2. 2813307Domain d4pikb1: 4pik B:1-141 [278996]
        Other proteins in same PDB: d4pika2, d4pikb2, d4pikc2, d4pikd2
        automated match to d2bmza_
        complexed with gol, man
      3. 2813308Domain d4pikc1: 4pik C:3-141 [278998]
        Other proteins in same PDB: d4pika2, d4pikb2, d4pikc2, d4pikd2
        automated match to d2bmza_
        complexed with gol, man
      4. 2813309Domain d4pikd1: 4pik D:1-141 [278999]
        Other proteins in same PDB: d4pika2, d4pikb2, d4pikc2, d4pikd2
        automated match to d2bmza_
        complexed with gol, man
    9. Domains for 4pit:
      1. 2813302Domain d4pita1: 4pit A:4-141 [279002]
        Other proteins in same PDB: d4pita2, d4pitb2, d4pitc2, d4pitd2
        automated match to d2bmza_
        complexed with gol, man
      2. 2813303Domain d4pitb1: 4pit B:1-141 [279005]
        Other proteins in same PDB: d4pita2, d4pitb2, d4pitc2, d4pitd2
        automated match to d2bmza_
        complexed with gol, man
      3. 2813304Domain d4pitc1: 4pit C:3-141 [279003]
        Other proteins in same PDB: d4pita2, d4pitb2, d4pitc2, d4pitd2
        automated match to d2bmza_
        complexed with gol, man
      4. 2813305Domain d4pitd1: 4pit D:1-141 [279004]
        Other proteins in same PDB: d4pita2, d4pitb2, d4pitc2, d4pitd2
        automated match to d2bmza_
        complexed with gol, man
    10. Domains for 4piu:
      1. 2813310Domain d4piua1: 4piu A:3-141 [279000]
        Other proteins in same PDB: d4piua2, d4piub2
        automated match to d2bmza_
        complexed with gol, na; mutant
      2. 2813311Domain d4piub1: 4piu B:1-141 [279001]
        Other proteins in same PDB: d4piua2, d4piub2
        automated match to d2bmza_
        complexed with gol, na; mutant
  2. 2813328Oryza sativa [TaxId:39946] [338879] (1 PDB entry)
  3. 2813331Oryza sativa [TaxId:39947] [340345] (1 PDB entry)
  4. 2813334Pineapple (Ananas comosus) [TaxId:4615] [356037] (3 PDB entries)
    1. Domains for 6flw:
      1. 2813337Domain d6flwa_: 6flw A: [356043]
        automated match to d5gvya_
        complexed with cit
      2. 2813338Domain d6flwb_: 6flw B: [356065]
        automated match to d5gvya_
        complexed with cit
      3. 2813339Domain d6flwc_: 6flw C: [356038]
        automated match to d5gvya_
        complexed with cit
      4. 2813340Domain d6flwd_: 6flw D: [356095]
        automated match to d5gvya_
        complexed with cit
    2. Domains for 6fly:
      1. 2813341Domain d6flya_: 6fly A: [356078]
        automated match to d5gvya_
        complexed with man
      2. 2813342Domain d6flyb_: 6fly B: [356115]
        automated match to d5gvya_
        complexed with man
    3. Domains for 6flz:
      1. 2813335Domain d6flza_: 6flz A: [356056]
        automated match to d5gvya_
        complexed with cit, mma
      2. 2813336Domain d6flzb_: 6flz B: [356048]
        automated match to d5gvya_
        complexed with cit, mma
  5. 2813343Sweet potato (Ipomoea batatas) [TaxId:4120] [193613] (4 PDB entries)
    1. Domains for 3r50:
      1. 2813352Domain d3r50a_: 3r50 A: [215572]
        automated match to d4ddnb_
      2. 2813353Domain d3r50b_: 3r50 B: [215573]
        automated match to d4ddnb_
      3. 2813354Domain d3r50c_: 3r50 C: [215574]
        automated match to d4ddnb_
      4. 2813355Domain d3r50d_: 3r50 D: [215575]
        automated match to d4ddnb_
      5. 2813356Domain d3r50e_: 3r50 E: [215576]
        automated match to d4ddnb_
    2. Domains for 3r51:
      1. 2813357Domain d3r51a_: 3r51 A: [215577]
        automated match to d4ddnb_
        complexed with mma
      2. 2813358Domain d3r51b_: 3r51 B: [215578]
        automated match to d4ddnb_
        complexed with mma
    3. Domains for 3r52:
      1. 2813348Domain d3r52a_: 3r52 A: [215579]
        automated match to d4ddnb_
        complexed with cd, gyp
      2. 2813349Domain d3r52b_: 3r52 B: [215580]
        automated match to d4ddnb_
        complexed with cd, gyp
      3. 2813350Domain d3r52c_: 3r52 C: [215581]
        automated match to d4ddnb_
        complexed with cd, gyp
      4. 2813351Domain d3r52d_: 3r52 D: [215582]
        automated match to d4ddnb_
        complexed with cd, gyp
    4. Domains for 4ddn:
      1. 2813344Domain d4ddna_: 4ddn A: [201687]
        automated match to d4ddnb_
        complexed with amg
      2. 2813345Domain d4ddnb_: 4ddn B: [193614]
        automated match to d1ouwb_
        complexed with amg
      3. 2813346Domain d4ddnc_: 4ddn C: [201688]
        automated match to d4ddnb_
        complexed with amg
      4. 2813347Domain d4ddnd_: 4ddn D: [201689]
        automated match to d4ddnb_
        complexed with amg

More info for Protein automated matches from b.77.3.0: automated matches

Timeline for Protein automated matches from b.77.3.0: automated matches: