Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2899459Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
  4. 2899460Superfamily c.69.1: alpha/beta-Hydrolases [53474] (43 families) (S)
    many members have left-handed crossover connection between strand 8 and additional strand 9
  5. 2900758Family c.69.1.17: Fungal lipases [53558] (5 proteins)
  6. 2900909Protein automated matches [190510] (9 species)
    not a true protein

Species:

  1. 2900910Aspergillus niger [TaxId:5061] [187463] (1 PDB entry)
  2. 2900914Candida antarctica [TaxId:34362] [236429] (5 PDB entries)
    1. Domains for 3w9b:
      1. 2900922Domain d3w9ba_: 3w9b A: [239905]
        automated match to d3w9bb_
        complexed with pe8
      2. 2900923Domain d3w9bb_: 3w9b B: [238325]
        automated match to d1tcaa_
        complexed with pe8
      3. 2900924Domain d3w9bc_: 3w9b C: [238327]
        automated match to d1tcaa_
        complexed with pe8
      4. 2900925Domain d3w9bd_: 3w9b D: [238326]
        automated match to d1tcaa_
        complexed with pe8
    2. Domain for 4k5q:
    3. Domains for 4k6g:
      1. 2900916Domain d4k6ga1: 4k6g A:1-317 [236434]
        Other proteins in same PDB: d4k6ga2, d4k6ga3, d4k6gb2, d4k6gb3
        automated match to d1tcaa_
        complexed with edo
      2. 2900917Domain d4k6gb1: 4k6g B:1-317 [236433]
        Other proteins in same PDB: d4k6ga2, d4k6ga3, d4k6gb2, d4k6gb3
        automated match to d1tcaa_
        complexed with edo
    4. Domains for 4k6h:
      1. 2900918Domain d4k6ha1: 4k6h A:1-317 [236430]
        Other proteins in same PDB: d4k6ha2, d4k6ha3, d4k6hb2, d4k6hb3
        automated match to d1tcaa_
        complexed with edo; mutant
      2. 2900919Domain d4k6hb1: 4k6h B:1-317 [236435]
        Other proteins in same PDB: d4k6ha2, d4k6ha3, d4k6hb2, d4k6hb3
        automated match to d1tcaa_
        complexed with edo; mutant
    5. Domains for 4k6k:
      1. 2900920Domain d4k6ka_: 4k6k A: [236432]
        Other proteins in same PDB: d4k6kb2
        automated match to d1tcaa_
        complexed with edo; mutant
      2. 2900921Domain d4k6kb1: 4k6k B:1-317 [262809]
        Other proteins in same PDB: d4k6kb2
        automated match to d4k6ga_
        complexed with edo; mutant
  3. 2900926Candida rugosa [TaxId:5481] [189895] (1 PDB entry)
  4. 2900928Fungus (Aspergillus oryzae) [TaxId:5062] [351938] (1 PDB entry)
  5. 2900931Penicillium cyclopium [TaxId:60167] [316049] (1 PDB entry)
  6. 2900933Penicillium roqueforti [TaxId:1365484] [395158] (1 PDB entry)
  7. 2900935Pseudozyma antarctica [TaxId:84753] [371852] (8 PDB entries)
    1. Domains for 6isp:
      1. 2900948Domain d6ispa1: 6isp A:1-315 [371868]
        Other proteins in same PDB: d6ispa2, d6ispb2, d6ispc2, d6ispd2
        automated match to d5a6va_
        complexed with ca, cpq; mutant
      2. 2900949Domain d6ispb1: 6isp B:1-316 [371864]
        Other proteins in same PDB: d6ispa2, d6ispb2, d6ispc2, d6ispd2
        automated match to d5a6va_
        complexed with ca, cpq; mutant
      3. 2900950Domain d6ispc1: 6isp C:1-317 [371907]
        Other proteins in same PDB: d6ispa2, d6ispb2, d6ispc2, d6ispd2
        automated match to d5a6va_
        complexed with ca, cpq; mutant
      4. 2900951Domain d6ispd1: 6isp D:1-316 [371862]
        Other proteins in same PDB: d6ispa2, d6ispb2, d6ispc2, d6ispd2
        automated match to d5a6va_
        complexed with ca, cpq; mutant
    2. Domains for 6isq:
      1. 2900946Domain d6isqa1: 6isq A:1-317 [371853]
        Other proteins in same PDB: d6isqa2, d6isqb2
        automated match to d5a6va_
        complexed with act, csd, edo, ipa, pge; mutant
      2. 2900947Domain d6isqb1: 6isq B:1-317 [371859]
        Other proteins in same PDB: d6isqa2, d6isqb2
        automated match to d5a6va_
        complexed with act, csd, edo, ipa, pge; mutant
    3. Domains for 6isr:
      1. 2900952Domain d6isra_: 6isr A: [371858]
        automated match to d5a6va_
        complexed with ni, peg, pg4; mutant
      2. 2900953Domain d6isrb_: 6isr B: [371876]
        automated match to d5a6va_
        complexed with ni, peg, pg4; mutant
    4. Domains for 6j1p:
      1. 2900940Domain d6j1pa1: 6j1p A:1-317 [378702]
        Other proteins in same PDB: d6j1pa2, d6j1pb2
        automated match to d5a6va_
        complexed with act, cl, edo, pge, so4; mutant
      2. 2900941Domain d6j1pb1: 6j1p B:1-317 [378747]
        Other proteins in same PDB: d6j1pa2, d6j1pb2
        automated match to d5a6va_
        complexed with act, cl, edo, pge, so4; mutant
    5. Domains for 6j1q:
      1. 2900936Domain d6j1qa1: 6j1q A:1-317 [378737]
        Other proteins in same PDB: d6j1qa2
        automated match to d5a6va_
        complexed with 1pe, cl, edo, epe, peg, so4; mutant
      2. 2900937Domain d6j1qb_: 6j1q B: [378698]
        Other proteins in same PDB: d6j1qa2
        automated match to d5a6va_
        complexed with 1pe, cl, edo, epe, peg, so4; mutant
    6. Domains for 6j1r:
      1. 2900938Domain d6j1ra1: 6j1r A:1-317 [378700]
        Other proteins in same PDB: d6j1ra2, d6j1rb2
        automated match to d5a6va_
        complexed with edo, peg, so4; mutant
      2. 2900939Domain d6j1rb1: 6j1r B:1-317 [378701]
        Other proteins in same PDB: d6j1ra2, d6j1rb2
        automated match to d5a6va_
        complexed with edo, peg, so4; mutant
    7. Domains for 6j1s:
      1. 2900944Domain d6j1sa1: 6j1s A:1-317 [378699]
        Other proteins in same PDB: d6j1sa2, d6j1sb2
        automated match to d5a6va_
        complexed with edo, peg, so4; mutant
      2. 2900945Domain d6j1sb1: 6j1s B:1-317 [378735]
        Other proteins in same PDB: d6j1sa2, d6j1sb2
        automated match to d5a6va_
        complexed with edo, peg, so4; mutant
    8. Domains for 6j1t:
      1. 2900942Domain d6j1ta1: 6j1t A:1-317 [378711]
        Other proteins in same PDB: d6j1ta2, d6j1tb2
        automated match to d5a6va_
        complexed with b7u, cl, edo, peg, pge, so4; mutant
      2. 2900943Domain d6j1tb1: 6j1t B:1-317 [378732]
        Other proteins in same PDB: d6j1ta2, d6j1tb2
        automated match to d5a6va_
        complexed with b7u, cl, edo, peg, pge, so4; mutant
  8. 2900954Rasamsonia emersonii [TaxId:68825] [387008] (1 PDB entry)
  9. 2900956Rhizopus microsporus [TaxId:4843] [261656] (1 PDB entry)

More info for Protein automated matches from c.69.1.17: Fungal lipases

Timeline for Protein automated matches from c.69.1.17: Fungal lipases: