Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2626587Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2633630Fold f.43: Chlorophyll a-b binding protein [103510] (1 superfamily)
    membrane all-alpha fold; three transmembrane helices
  4. 2633631Superfamily f.43.1: Chlorophyll a-b binding protein [103511] (2 families) (S)
    duplication: contains two structural repeats
  5. 2633632Family f.43.1.1: Chlorophyll a-b binding protein [103512] (2 proteins)
  6. 2633645Protein automated matches [190507] (3 species)
    not a true protein

Species:

  1. 2633646Chlamydomonas reinhardtii [TaxId:3055] [377998] (5 PDB entries)
    1. Domains for 6kac:
      1. 2633652Domain d6kacg_: 6kac G: [377999]
        Other proteins in same PDB: d6kaca_, d6kacb_, d6kacc_, d6kacd_, d6kace_, d6kacf_, d6kach_, d6kacj_, d6kack_, d6kacm_, d6kaco_, d6kacp_, d6kacz_
        automated match to d5xnl2_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lmu, lut, nex, oex, pho, pl9, sqd, xat
      2. 2633653Domain d6kacn_: 6kac n: [378014]
        Other proteins in same PDB: d6kaca_, d6kacb_, d6kacc_, d6kacd_, d6kace_, d6kacf_, d6kach_, d6kacj_, d6kack_, d6kacm_, d6kaco_, d6kacp_, d6kacz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lmu, lut, nex, oex, pho, pl9, sqd, xat
      3. 2633654Domain d6kacy_: 6kac y: [378019]
        Other proteins in same PDB: d6kaca_, d6kacb_, d6kacc_, d6kacd_, d6kace_, d6kacf_, d6kach_, d6kacj_, d6kack_, d6kacm_, d6kaco_, d6kacp_, d6kacz_
        automated match to d5xnl3_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lmu, lut, nex, oex, pho, pl9, sqd, xat
    2. Domains for 7dz7:
      1. 2633647Domain d7dz7u_: 7dz7 U: [405221]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7v_
        automated match to d2bhwa_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      2. 2633648Domain d7dz7w_: 7dz7 W: [405306]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7v_
        automated match to d5xnl2_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      3. 2633649Domain d7dz7x_: 7dz7 X: [405267]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7v_
        automated match to d5xnl2_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      4. 2633650Domain d7dz7y_: 7dz7 Y: [405177]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7v_
        automated match to d2bhwa_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      5. 2633651Domain d7dz7z_: 7dz7 Z: [405210]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7a_, d7dz7b_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7v_
        automated match to d5xnl3_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
    3. Domains for 7dz8:
      1. 2633660Domain d7dz8u_: 7dz8 U: [405127]
        Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8e_, d7dz8f_, d7dz8j_, d7dz8v_
        automated match to d2bhwa_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      2. 2633661Domain d7dz8w_: 7dz8 W: [405062]
        Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8e_, d7dz8f_, d7dz8j_, d7dz8v_
        automated match to d5xnl2_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      3. 2633662Domain d7dz8x_: 7dz8 X: [405138]
        Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8e_, d7dz8f_, d7dz8j_, d7dz8v_
        automated match to d5xnl2_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      4. 2633663Domain d7dz8y_: 7dz8 Y: [405211]
        Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8e_, d7dz8f_, d7dz8j_, d7dz8v_
        automated match to d2bhwa_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      5. 2633664Domain d7dz8z_: 7dz8 Z: [405089]
        Other proteins in same PDB: d7dz81_, d7dz83_, d7dz84_, d7dz87_, d7dz88_, d7dz89_, d7dz8a_, d7dz8b_, d7dz8c_, d7dz8d_, d7dz8e_, d7dz8f_, d7dz8j_, d7dz8v_
        automated match to d2bhwa_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
    4. Domains for 7e0j:
      1. 2633657Domain d7e0jx_: 7e0j X: [405118]
        automated match to d5xnl2_
        complexed with chl, cla, lhg, lut, nex, tpo, xat; mutant
      2. 2633658Domain d7e0jy_: 7e0j Y: [405190]
        automated match to d2bhwa_
        complexed with chl, cla, lhg, lut, nex, tpo, xat; mutant
      3. 2633659Domain d7e0jz_: 7e0j Z: [405233]
        automated match to d5xnl3_
        complexed with chl, cla, lhg, lut, nex, tpo, xat; mutant
    5. Domains for 7e0k:
      1. 2633655Domain d7e0ku_: 7e0k U: [405254]
        Other proteins in same PDB: d7e0kv_
        automated match to d2bhwa_
        complexed with chl, cla, lhg, lmg, lut, nex, tpo, xat; mutant
      2. 2633656Domain d7e0kw_: 7e0k W: [405188]
        Other proteins in same PDB: d7e0kv_
        automated match to d5xnl2_
        complexed with chl, cla, lhg, lmg, lut, nex, tpo, xat; mutant
  2. 2633665Pea (Pisum sativum) [TaxId:3888] [187461] (2 PDB entries)
    1. Domains for 2bhw:
      1. 2633666Domain d2bhwa_: 2bhw A: [163089]
        automated match to d1rwtf_
        complexed with chl, cla, dgd, lhg, lux, nex, xat
      2. 2633667Domain d2bhwb_: 2bhw B: [163090]
        automated match to d1rwtf_
        complexed with chl, cla, dgd, lhg, lux, nex, xat
      3. 2633668Domain d2bhwc_: 2bhw C: [163091]
        automated match to d1rwtf_
        complexed with chl, cla, dgd, lhg, lux, nex, xat
    2. Domains for 5xnl:
      1. 2633669Domain d5xnl1_: 5xnl 1: [344454]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      2. 2633670Domain d5xnl2_: 5xnl 2: [344455]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      3. 2633671Domain d5xnl3_: 5xnl 3: [344456]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d1rwtf_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      4. 2633672Domain d5xnl5_: 5xnl 5: [344457]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      5. 2633673Domain d5xnl6_: 5xnl 6: [344458]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      6. 2633674Domain d5xnl7_: 5xnl 7: [344459]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d1rwtf_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      7. 2633675Domain d5xnlg_: 5xnl G: [344461]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      8. 2633676Domain d5xnln_: 5xnl N: [344464]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
      9. 2633677Domain d5xnly_: 5xnl Y: [344467]
        Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
        automated match to d2bhwa_
        complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat
  3. 2633678Spinach (Spinacia oleracea) [TaxId:3562] [257007] (1 PDB entry)

More info for Protein automated matches from f.43.1.1: Chlorophyll a-b binding protein

Timeline for Protein automated matches from f.43.1.1: Chlorophyll a-b binding protein: