Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2363595Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2363797Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2364168Family b.2.3.0: automated matches [191391] (1 protein)
    not a true family
  6. 2364169Protein automated matches [190503] (9 species)
    not a true protein

Species:

  1. 2364170Bacillus cereus [TaxId:226900] [311336] (1 PDB entry)
  2. 2364173Enterococcus faecalis [TaxId:1351] [188324] (1 PDB entry)
  3. 2364175Escherichia coli [TaxId:562] [187451] (5 PDB entries)
    1. Domains for 2bcm:
      1. 2364176Domain d2bcma_: 2bcm A: [163041]
        automated match to d1rxla_
      2. 2364177Domain d2bcmb_: 2bcm B: [163042]
        automated match to d1rxla_
      3. 2364178Domain d2bcmc_: 2bcm C: [163043]
        automated match to d1rxla_
    2. Domains for 4or1:
      1. 2364193Domain d4or1a1: 4or1 A:1-143 [268529]
        Other proteins in same PDB: d4or1a2, d4or1b2
        automated match to d4phxc_
        complexed with act, so4
      2. 2364194Domain d4or1b1: 4or1 B:1-143 [300088]
        Other proteins in same PDB: d4or1a2, d4or1b2
        automated match to d4or1a_
        complexed with act, so4
    3. Domains for 4phx:
      1. 2364185Domain d4phxa1: 4phx A:1-120 [263487]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      2. 2364186Domain d4phxb1: 4phx B:1-120 [263488]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      3. 2364187Domain d4phxc1: 4phx C:1-119 [259923]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d2axwb_
      4. 2364188Domain d4phxd1: 4phx D:1-119 [263489]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      5. 2364189Domain d4phxe1: 4phx E:1-123 [263490]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      6. 2364190Domain d4phxf1: 4phx F:1-120 [261547]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d2axwb_
      7. 2364191Domain d4phxg1: 4phx G:1-120 [263491]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      8. 2364192Domain d4phxh1: 4phx H:1-131 [263492]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
    4. Domains for 5lne:
      1. 2364183Domain d5lnea_: 5lne A: [323709]
        Other proteins in same PDB: d5lneb2
        automated match to d4csta_
        complexed with a2g, gal, ni
      2. 2364184Domain d5lneb1: 5lne B:1-158 [323713]
        Other proteins in same PDB: d5lneb2
        automated match to d4csta_
        complexed with a2g, gal, ni
    5. Domains for 5lng:
      1. 2364179Domain d5lnga_: 5lng A: [323722]
        automated match to d4csta_
        complexed with so4
      2. 2364180Domain d5lngb_: 5lng B: [323736]
        automated match to d4csta_
        complexed with so4
      3. 2364181Domain d5lngc_: 5lng C: [323705]
        automated match to d4csta_
        complexed with so4
      4. 2364182Domain d5lngd_: 5lng D: [323724]
        automated match to d4csta_
        complexed with so4
  4. 2364195Escherichia coli [TaxId:83333] [346217] (3 PDB entries)
    1. Domain for 2m5g:
    2. Domains for 3jwn:
      1. 2364196Domain d3jwne_: 3jwn E: [343811]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwnh1, d3jwnh2, d3jwni1, d3jwni2, d3jwnn1, d3jwnn2
        automated match to d5lp9a_
        complexed with gol
      2. 2364197Domain d3jwnf_: 3jwn F: [343812]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwnh1, d3jwnh2, d3jwni1, d3jwni2, d3jwnn1, d3jwnn2
        automated match to d5lp9a_
        complexed with gol
    3. Domain for 5nkt:
  5. 2364199Shigella flexneri [TaxId:623] [343012] (1 PDB entry)
  6. 2364201Staphylococcus aureus [TaxId:1280] [346218] (1 PDB entry)
  7. 2364203Staphylococcus aureus [TaxId:158878] [336878] (2 PDB entries)
    1. Domain for 5cf3:
    2. Domains for 5wta:
      1. 2364205Domain d5wtaa1: 5wta A:272-418 [336879]
        automated match to d1r17a1
      2. 2364206Domain d5wtaa2: 5wta A:419-586 [336880]
        automated match to d1r17a2
      3. 2364207Domain d5wtab1: 5wta B:272-418 [336923]
        automated match to d1r17a1
      4. 2364208Domain d5wtab2: 5wta B:419-586 [336924]
        automated match to d1r17a2
      5. 2364209Domain d5wtac1: 5wta C:273-418 [336901]
        automated match to d1r17a1
      6. 2364210Domain d5wtac2: 5wta C:419-586 [336902]
        automated match to d1r17a2
      7. 2364211Domain d5wtad1: 5wta D:273-418 [336909]
        automated match to d1r17a1
      8. 2364212Domain d5wtad2: 5wta D:419-586 [336910]
        automated match to d1r17a2
  8. 2364213Staphylococcus aureus [TaxId:282459] [331651] (1 PDB entry)
  9. 3049053Escherichia coli [TaxId:364106] [349115] (7 PDB entries)
    1. Domains for 6aow:
      1. 3049054Domain d6aowa_: 6aow A: [349116]
        automated match to d4xocb_
        complexed with so4
      2. 3049057Domain d6aowb_: 6aow B: [349119]
        automated match to d4xocb_
        complexed with so4
    2. Domains for 6aox:
      1. 3049108Domain d6aoxb_: 6aox B: [349170]
        automated match to d4xocb_
        complexed with tf0
      2. 3049308Domain d6aoxa_: 6aox A: [349370]
        automated match to d4xocb_
        complexed with tf0
    3. Domains for 6aoy:
      1. 3049061Domain d6aoyb_: 6aoy B: [349123]
        automated match to d4xocb_
        complexed with 145, so4
      2. 3049101Domain d6aoya_: 6aoy A: [349163]
        automated match to d4xocb_
        complexed with 145, so4
    4. Domains for 6arm:
      1. 3049059Domain d6arma_: 6arm A: [349121]
        automated match to d4xocb_
        complexed with 145, so4
      2. 3049086Domain d6armb_: 6arm B: [349148]
        automated match to d4xocb_
        complexed with 145, so4
    5. Domains for 6arn:
      1. 3049055Domain d6arna_: 6arn A: [349117]
        automated match to d4xocb_
        complexed with bqy, so4
      2. 3049126Domain d6arnb_: 6arn B: [349188]
        automated match to d4xocb_
        complexed with bqy, so4
    6. Domains for 6aro:
      1. 3049070Domain d6aroa_: 6aro A: [349132]
        automated match to d4xocb_
        complexed with bs7, so4
      2. 3049116Domain d6arob_: 6aro B: [349178]
        automated match to d4xocb_
        complexed with bs7, so4
    7. Domains for 6as8:
      1. 3049137Domain d6as8a_: 6as8 A: [349199]
        automated match to d4xocb_
        complexed with btg
      2. 3049155Domain d6as8b_: 6as8 B: [349217]
        automated match to d4xocb_
        complexed with btg

More info for Protein automated matches from b.2.3.0: automated matches

Timeline for Protein automated matches from b.2.3.0: automated matches: