Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2312794Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 2312848Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 2312849Family a.24.3.1: Cytochrome b562 [47176] (2 proteins)
    automatically mapped to Pfam PF07361
  6. 2313062Protein automated matches [190502] (2 species)
    not a true protein

Species:

  1. Escherichia coli [TaxId:562] [187450] (24 PDB entries)
    1. Domains for 2bc5:
      1. 2313092Domain d2bc5a_: 2bc5 A: [163036]
        automated match to d1qq3a_
        complexed with hem, so4
      2. 2313093Domain d2bc5b_: 2bc5 B: [163037]
        automated match to d1qq3a_
        complexed with hem, so4
      3. 2313094Domain d2bc5c_: 2bc5 C: [163038]
        automated match to d1qq3a_
        complexed with hem, so4
      4. 2313095Domain d2bc5d_: 2bc5 D: [163039]
        automated match to d1qq3a_
        complexed with hem, so4
    2. Domains for 3iq5:
      1. 2313080Domain d3iq5a_: 3iq5 A: [178521]
        automated match to d1qq3a_
        complexed with hem
      2. 2313081Domain d3iq5b_: 3iq5 B: [178522]
        automated match to d1qq3a_
        complexed with hem
      3. 2313082Domain d3iq5c_: 3iq5 C: [178523]
        automated match to d1qq3a_
        complexed with hem
      4. 2313083Domain d3iq5d_: 3iq5 D: [178524]
        automated match to d1qq3a_
        complexed with hem
    3. Domains for 3iq6:
      1. 2313114Domain d3iq6a_: 3iq6 A: [178525]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 2313115Domain d3iq6b_: 3iq6 B: [178526]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 2313116Domain d3iq6c_: 3iq6 C: [178527]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 2313117Domain d3iq6d_: 3iq6 D: [178528]
        automated match to d1qq3a_
        complexed with hem, zn
      5. 2313118Domain d3iq6e_: 3iq6 E: [178529]
        automated match to d1qq3a_
        complexed with hem, zn
      6. 2313119Domain d3iq6f_: 3iq6 F: [178530]
        automated match to d1qq3a_
        complexed with hem, zn
      7. 2313120Domain d3iq6g_: 3iq6 G: [178531]
        automated match to d1qq3a_
        complexed with hem, zn
      8. 2313121Domain d3iq6h_: 3iq6 H: [178532]
        automated match to d1qq3a_
        complexed with hem, zn
    4. Domain for 3l1m:
    5. Domains for 3qvy:
      1. 2313103Domain d3qvya_: 3qvy A: [184647]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      2. 2313104Domain d3qvyb_: 3qvy B: [184648]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      3. 2313105Domain d3qvyc_: 3qvy C: [184649]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      4. 2313106Domain d3qvyd_: 3qvy D: [184650]
        automated match to d1qq3a_
        complexed with hem, me7, zn
    6. Domains for 3qvz:
      1. 2313122Domain d3qvza_: 3qvz A: [184651]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      2. 2313123Domain d3qvzb_: 3qvz B: [184652]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      3. 2313124Domain d3qvzc_: 3qvz C: [184653]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      4. 2313125Domain d3qvzd_: 3qvz D: [184654]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
    7. Domains for 3qw0:
      1. 2313068Domain d3qw0a_: 3qw0 A: [184655]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      2. 2313069Domain d3qw0b_: 3qw0 B: [184656]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      3. 2313070Domain d3qw0c_: 3qw0 C: [184657]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      4. 2313071Domain d3qw0d_: 3qw0 D: [184658]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
    8. Domains for 3qw1:
      1. 2313126Domain d3qw1a_: 3qw1 A: [184659]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      2. 2313127Domain d3qw1b_: 3qw1 B: [184660]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      3. 2313128Domain d3qw1c_: 3qw1 C: [184661]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      4. 2313129Domain d3qw1d_: 3qw1 D: [184662]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
    9. Domains for 6ai5:
      1. 2313086Domain d6ai5a_: 6ai5 A: [373980]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      2. 2313087Domain d6ai5c_: 6ai5 C: [373991]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      3. 2313088Domain d6ai5e_: 6ai5 E: [373909]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      4. 2313089Domain d6ai5g_: 6ai5 G: [373910]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
    10. Domains for 6dy4:
      1. 2313096Domain d6dy4a_: 6dy4 A: [368026]
        automated match to d2bc5a_
        complexed with fe, hec
      2. 2313097Domain d6dy4d_: 6dy4 D: [368045]
        automated match to d2bc5a_
        complexed with fe, hec
    11. Domains for 6dy6:
      1. 2313084Domain d6dy6a_: 6dy6 A: [368029]
        automated match to d2bc5a_
        complexed with 1pe, hec, mn
      2. 2313085Domain d6dy6b_: 6dy6 B: [368018]
        automated match to d2bc5a_
        complexed with 1pe, hec, mn
    12. Domains for 6dy8:
      1. 2313098Domain d6dy8a_: 6dy8 A: [368028]
        automated match to d2bc5a_
        complexed with hec, mn
      2. 2313099Domain d6dy8b_: 6dy8 B: [368048]
        automated match to d2bc5a_
        complexed with hec, mn
      3. 2313100Domain d6dy8c_: 6dy8 C: [368032]
        automated match to d2bc5a_
        complexed with hec, mn
      4. 2313101Domain d6dy8d_: 6dy8 D: [368053]
        automated match to d2bc5a_
        complexed with hec, mn
    13. Domains for 6dyb:
      1. 2313130Domain d6dyba_: 6dyb A: [368017]
        automated match to d2bc5a_
        complexed with ca, hec
      2. 2313131Domain d6dybc_: 6dyb C: [368066]
        automated match to d2bc5a_
        complexed with ca, hec
    14. Domains for 6dyc:
      1. 2313066Domain d6dyca_: 6dyc A: [368007]
        automated match to d2bc5a_
        complexed with ca, co, hec
      2. 2313067Domain d6dycb_: 6dyc B: [368010]
        automated match to d2bc5a_
        complexed with ca, co, hec
    15. Domains for 6dyd:
      1. 2313078Domain d6dyda_: 6dyd A: [368080]
        automated match to d2bc5a_
        complexed with ca, cu, hec
      2. 2313079Domain d6dydc_: 6dyd C: [368044]
        automated match to d2bc5a_
        complexed with ca, cu, hec
    16. Domains for 6dye:
      1. 2313112Domain d6dyea_: 6dye A: [368015]
        automated match to d2bc5a_
        complexed with ca, fe, hec
      2. 2313113Domain d6dyeb_: 6dye B: [368009]
        automated match to d2bc5a_
        complexed with ca, fe, hec
    17. Domains for 6dyf:
      1. 2313064Domain d6dyfa_: 6dyf A: [368021]
        automated match to d2bc5a_
        complexed with cl, cu, hec, peg
      2. 2313065Domain d6dyfb_: 6dyf B: [368036]
        automated match to d2bc5a_
        complexed with cl, cu, hec, peg
    18. Domains for 6dyg:
      1. 2313072Domain d6dyga_: 6dyg A: [368011]
        automated match to d2bc5a_
        complexed with fe, hec, mg
      2. 2313073Domain d6dygb_: 6dyg B: [368008]
        automated match to d2bc5a_
        complexed with fe, hec, mg
    19. Domains for 6dyh:
      1. 2313090Domain d6dyha_: 6dyh A: [368030]
        automated match to d2bc5a_
        complexed with hec, v
      2. 2313091Domain d6dyhd_: 6dyh D: [368047]
        automated match to d2bc5a_
        complexed with hec, v
    20. Domain for 6dyi:
    21. Domains for 6lde:
      1. 2313076Domain d6ldea_: 6lde A: [399556]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. 2313077Domain d6ldec_: 6lde C: [399611]
        automated match to d5xzja_
        complexed with cl, hec, zn
    22. Domains for 6ldf:
      1. 2313109Domain d6ldfa_: 6ldf A: [399613]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. 2313110Domain d6ldfc_: 6ldf C: [399591]
        automated match to d5xzja_
        complexed with cl, hec, zn
    23. Domains for 6ldg:
      1. 2313074Domain d6ldga_: 6ldg A: [399669]
        automated match to d5xzja_
        complexed with cl, hec, mg, zn
      2. 2313075Domain d6ldgc_: 6ldg C: [399569]
        automated match to d5xzja_
        complexed with cl, hec, mg, zn
    24. Domains for 7dcl:
      1. 2313107Domain d7dcla_: 7dcl A: [398833]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. 2313108Domain d7dclb_: 7dcl B: [398849]
        automated match to d5xzja_
        complexed with cl, hec, zn
  2. 2313132Salmonella enterica [TaxId:90371] [226371] (1 PDB entry)

More info for Protein automated matches from a.24.3.1: Cytochrome b562

Timeline for Protein automated matches from a.24.3.1: Cytochrome b562: