Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987402Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 1987403Family a.24.3.1: Cytochrome b562 [47176] (2 protein domains)
    automatically mapped to Pfam PF07361
  6. 1987414Protein automated matches [190502] (2 species)
    not a true protein

Species:

  1. 1987415Escherichia coli [TaxId:562] [187450] (37 PDB entries)
    1. Domains for 2bc5:
      1. 1987479Domain d2bc5a_: 2bc5 A: [163036]
        automated match to d1qq3a_
        complexed with hem, so4
      2. 1987480Domain d2bc5b_: 2bc5 B: [163037]
        automated match to d1qq3a_
        complexed with hem, so4
      3. 1987481Domain d2bc5c_: 2bc5 C: [163038]
        automated match to d1qq3a_
        complexed with hem, so4
      4. 1987482Domain d2bc5d_: 2bc5 D: [163039]
        automated match to d1qq3a_
        complexed with hem, so4
    2. Domains for 2qla:
      1. 1987543Domain d2qlaa_: 2qla A: [167702]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987544Domain d2qlab_: 2qla B: [167703]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987545Domain d2qlac_: 2qla C: [167704]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 1987546Domain d2qlad_: 2qla D: [167705]
        automated match to d1qq3a_
        complexed with hem, zn
    3. Domains for 3c62:
      1. 1987440Domain d3c62a_: 3c62 A: [173052]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      2. 1987441Domain d3c62b_: 3c62 B: [173053]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      3. 1987442Domain d3c62c_: 3c62 C: [173054]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      4. 1987443Domain d3c62d_: 3c62 D: [173055]
        automated match to d1qq3a_
        complexed with ca, hem, zn
    4. Domains for 3c63:
      1. 1987424Domain d3c63a_: 3c63 A: [173056]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      2. 1987425Domain d3c63b_: 3c63 B: [173057]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      3. 1987426Domain d3c63c_: 3c63 C: [173058]
        automated match to d1qq3a_
        complexed with ca, hem, zn
      4. 1987427Domain d3c63d_: 3c63 D: [173059]
        automated match to d1qq3a_
        complexed with ca, hem, zn
    5. Domains for 3de8:
      1. 1987420Domain d3de8a_: 3de8 A: [173861]
        automated match to d1qq3a_
        complexed with ca, cu, hem
      2. 1987421Domain d3de8b_: 3de8 B: [173862]
        automated match to d1qq3a_
        complexed with ca, cu, hem
      3. 1987422Domain d3de8c_: 3de8 C: [173863]
        automated match to d1qq3a_
        complexed with ca, cu, hem
      4. 1987423Domain d3de8d_: 3de8 D: [173864]
        automated match to d1qq3a_
        complexed with ca, cu, hem
    6. Domain for 3de9:
    7. Domains for 3foo:
      1. 1987497Domain d3fooa_: 3foo A: [175935]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      2. 1987498Domain d3foob_: 3foo B: [175936]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      3. 1987499Domain d3fooc_: 3foo C: [175937]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      4. 1987500Domain d3food_: 3foo D: [175938]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      5. 1987501Domain d3fooe_: 3foo E: [175939]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      6. 1987502Domain d3foof_: 3foo F: [175940]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      7. 1987503Domain d3foog_: 3foo G: [175941]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      8. 1987504Domain d3fooh_: 3foo H: [175942]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      9. 1987505Domain d3fooi_: 3foo I: [175943]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      10. 1987506Domain d3fooj_: 3foo J: [175944]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      11. 1987507Domain d3fook_: 3foo K: [175945]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
      12. 1987508Domain d3fool_: 3foo L: [175946]
        automated match to d1qq3a_
        complexed with hem, ni, pxx
    8. Domains for 3fop:
      1. 1987533Domain d3fopa_: 3fop A: [246177]
        automated match to d3fooa_
        complexed with hem, ni, pxx
      2. 1987534Domain d3fopb_: 3fop B: [246178]
        automated match to d3fooa_
        complexed with hem, ni, pxx
    9. Domains for 3hni:
      1. 1987485Domain d3hnia_: 3hni A: [177706]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987486Domain d3hnib_: 3hni B: [177707]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987487Domain d3hnic_: 3hni C: [177708]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 1987488Domain d3hnid_: 3hni D: [177709]
        automated match to d1qq3a_
        complexed with hem, zn
      5. 1987489Domain d3hnie_: 3hni E: [177710]
        automated match to d1qq3a_
        complexed with hem, zn
      6. 1987490Domain d3hnif_: 3hni F: [177711]
        automated match to d1qq3a_
        complexed with hem, zn
      7. 1987491Domain d3hnig_: 3hni G: [177712]
        automated match to d1qq3a_
        complexed with hem, zn
      8. 1987492Domain d3hnih_: 3hni H: [177713]
        automated match to d1qq3a_
        complexed with hem, zn
    10. Domains for 3hnj:
      1. 1987460Domain d3hnja_: 3hnj A: [177714]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987461Domain d3hnjb_: 3hnj B: [177715]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987462Domain d3hnjc_: 3hnj C: [177716]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 1987463Domain d3hnjd_: 3hnj D: [177717]
        automated match to d1qq3a_
        complexed with hem, zn
    11. Domains for 3hnk:
      1. 1987450Domain d3hnka_: 3hnk A: [177718]
        automated match to d1qq3a_
        complexed with hem
      2. 1987451Domain d3hnkb_: 3hnk B: [177719]
        automated match to d1qq3a_
        complexed with hem
    12. Domains for 3hnl:
      1. 1987465Domain d3hnla_: 3hnl A: [177720]
        automated match to d1qq3a_
        complexed with cl, cu, hem
      2. 1987466Domain d3hnlb_: 3hnl B: [177721]
        automated match to d1qq3a_
        complexed with cl, cu, hem
    13. Domains for 3iq5:
      1. 1987467Domain d3iq5a_: 3iq5 A: [178521]
        automated match to d1qq3a_
        complexed with hem
      2. 1987468Domain d3iq5b_: 3iq5 B: [178522]
        automated match to d1qq3a_
        complexed with hem
      3. 1987469Domain d3iq5c_: 3iq5 C: [178523]
        automated match to d1qq3a_
        complexed with hem
      4. 1987470Domain d3iq5d_: 3iq5 D: [178524]
        automated match to d1qq3a_
        complexed with hem
    14. Domains for 3iq6:
      1. 1987513Domain d3iq6a_: 3iq6 A: [178525]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987514Domain d3iq6b_: 3iq6 B: [178526]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987515Domain d3iq6c_: 3iq6 C: [178527]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 1987516Domain d3iq6d_: 3iq6 D: [178528]
        automated match to d1qq3a_
        complexed with hem, zn
      5. 1987517Domain d3iq6e_: 3iq6 E: [178529]
        automated match to d1qq3a_
        complexed with hem, zn
      6. 1987518Domain d3iq6f_: 3iq6 F: [178530]
        automated match to d1qq3a_
        complexed with hem, zn
      7. 1987519Domain d3iq6g_: 3iq6 G: [178531]
        automated match to d1qq3a_
        complexed with hem, zn
      8. 1987520Domain d3iq6h_: 3iq6 H: [178532]
        automated match to d1qq3a_
        complexed with hem, zn
    15. Domain for 3l1m:
    16. Domains for 3m15:
      1. 1987526Domain d3m15a_: 3m15 A: [180706]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987527Domain d3m15b_: 3m15 B: [180707]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987528Domain d3m15c_: 3m15 C: [180708]
        automated match to d1qq3a_
        complexed with hem, zn
    17. Domains for 3m4b:
      1. 1987493Domain d3m4ba_: 3m4b A: [180820]
        automated match to d1qq3a_
        complexed with act, hem, zn
      2. 1987494Domain d3m4bb_: 3m4b B: [180821]
        automated match to d1qq3a_
        complexed with act, hem, zn
      3. 1987495Domain d3m4bc_: 3m4b C: [180822]
        automated match to d1qq3a_
        complexed with act, hem, zn
      4. 1987496Domain d3m4bd_: 3m4b D: [180823]
        automated match to d1qq3a_
        complexed with act, hem, zn
    18. Domains for 3m4c:
      1. 1987432Domain d3m4ca_: 3m4c A: [180824]
        automated match to d1qq3a_
        complexed with act, hem, zn
      2. 1987433Domain d3m4cb_: 3m4c B: [180825]
        automated match to d1qq3a_
        complexed with act, hem, zn
      3. 1987434Domain d3m4cc_: 3m4c C: [180826]
        automated match to d1qq3a_
        complexed with act, hem, zn
      4. 1987435Domain d3m4cd_: 3m4c D: [180827]
        automated match to d1qq3a_
        complexed with act, hem, zn
    19. Domains for 3m79:
      1. 1987452Domain d3m79a_: 3m79 A: [180901]
        automated match to d1qq3a_
        complexed with hem, zn
      2. 1987453Domain d3m79b_: 3m79 B: [180902]
        automated match to d1qq3a_
        complexed with hem, zn
      3. 1987454Domain d3m79c_: 3m79 C: [180903]
        automated match to d1qq3a_
        complexed with hem, zn
      4. 1987455Domain d3m79d_: 3m79 D: [180904]
        automated match to d1qq3a_
        complexed with hem, zn
      5. 1987456Domain d3m79e_: 3m79 E: [180905]
        automated match to d1qq3a_
        complexed with hem, zn
      6. 1987457Domain d3m79f_: 3m79 F: [180906]
        automated match to d1qq3a_
        complexed with hem, zn
      7. 1987458Domain d3m79g_: 3m79 G: [180907]
        automated match to d1qq3a_
        complexed with hem, zn
      8. 1987459Domain d3m79h_: 3m79 H: [180908]
        automated match to d1qq3a_
        complexed with hem, zn
    20. Domains for 3nmi:
      1. 1987444Domain d3nmia_: 3nmi A: [182397]
        automated match to d1qq3a_
        complexed with act, hem, pxx
      2. 1987445Domain d3nmib_: 3nmi B: [182398]
        automated match to d1qq3a_
        complexed with act, hem, pxx
      3. 1987446Domain d3nmic_: 3nmi C: [182399]
        automated match to d1qq3a_
        complexed with act, hem, pxx
      4. 1987447Domain d3nmid_: 3nmi D: [182400]
        automated match to d1qq3a_
        complexed with act, hem, pxx
      5. 1987448Domain d3nmie_: 3nmi E: [182401]
        automated match to d1qq3a_
        complexed with act, hem, pxx
      6. 1987449Domain d3nmif_: 3nmi F: [182402]
        automated match to d1qq3a_
        complexed with act, hem, pxx
    21. Domains for 3nmj:
      1. 1987535Domain d3nmja_: 3nmj A: [247960]
        automated match to d3nmia_
        complexed with hem, ni, pxx
      2. 1987536Domain d3nmjb_: 3nmj B: [247961]
        automated match to d3nmia_
        complexed with hem, ni, pxx
      3. 1987537Domain d3nmjc_: 3nmj C: [247962]
        automated match to d3nmia_
        complexed with hem, ni, pxx
      4. 1987538Domain d3nmjd_: 3nmj D: [247963]
        automated match to d3nmia_
        complexed with hem, ni, pxx
    22. Domains for 3nmk:
      1. 1987522Domain d3nmka_: 3nmk A: [182403]
        automated match to d1qq3a_
        complexed with hem, pxx, zn
      2. 1987523Domain d3nmkb_: 3nmk B: [182404]
        automated match to d1qq3a_
        complexed with hem, pxx, zn
      3. 1987524Domain d3nmkc_: 3nmk C: [182405]
        automated match to d1qq3a_
        complexed with hem, pxx, zn
      4. 1987525Domain d3nmkd_: 3nmk D: [182406]
        automated match to d1qq3a_
        complexed with hem, pxx, zn
    23. Domains for 3qvy:
      1. 1987509Domain d3qvya_: 3qvy A: [184647]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      2. 1987510Domain d3qvyb_: 3qvy B: [184648]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      3. 1987511Domain d3qvyc_: 3qvy C: [184649]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      4. 1987512Domain d3qvyd_: 3qvy D: [184650]
        automated match to d1qq3a_
        complexed with hem, me7, zn
    24. Domains for 3qvz:
      1. 1987539Domain d3qvza_: 3qvz A: [184651]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      2. 1987540Domain d3qvzb_: 3qvz B: [184652]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      3. 1987541Domain d3qvzc_: 3qvz C: [184653]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      4. 1987542Domain d3qvzd_: 3qvz D: [184654]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
    25. Domains for 3qw0:
      1. 1987428Domain d3qw0a_: 3qw0 A: [184655]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      2. 1987429Domain d3qw0b_: 3qw0 B: [184656]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      3. 1987430Domain d3qw0c_: 3qw0 C: [184657]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      4. 1987431Domain d3qw0d_: 3qw0 D: [184658]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
    26. Domains for 3qw1:
      1. 1987547Domain d3qw1a_: 3qw1 A: [184659]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      2. 1987548Domain d3qw1b_: 3qw1 B: [184660]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      3. 1987549Domain d3qw1c_: 3qw1 C: [184661]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      4. 1987550Domain d3qw1d_: 3qw1 D: [184662]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
    27. Domains for 3tol:
      1. 1987436Domain d3tola_: 3tol A: [200853]
        automated match to d3tolc_
        complexed with ca, hem, zn
      2. 1987437Domain d3tolb_: 3tol B: [194998]
        automated match to d3de8a_
        complexed with ca, hem, zn
      3. 1987438Domain d3tolc_: 3tol C: [194997]
        automated match to d3de8a_
        complexed with ca, hem, zn
      4. 1987439Domain d3told_: 3tol D: [200854]
        automated match to d3tolc_
        complexed with ca, hem, zn
    28. Domains for 3tom:
      1. 1987473Domain d3toma_: 3tom A: [216916]
        automated match to d3tolc_
        complexed with hem, zn
      2. 1987474Domain d3tomb_: 3tom B: [216917]
        automated match to d3tolc_
        complexed with hem, zn
      3. 1987475Domain d3tomc_: 3tom C: [216918]
        automated match to d3tolc_
        complexed with hem, zn
      4. 1987476Domain d3tomd_: 3tom D: [216919]
        automated match to d3tolc_
        complexed with hem, zn
    29. Domains for 4je9:
      1. 1987471Domain d4je9a_: 4je9 A: [223766]
        automated match to d3m79a_
        complexed with hem
      2. 1987472Domain d4je9b_: 4je9 B: [223767]
        automated match to d3m79a_
        complexed with hem
    30. Domains for 4jea:
      1. 1987416Domain d4jeaa_: 4jea A: [223768]
        automated match to d3m79a_
        complexed with hem, so4, zn
      2. 1987417Domain d4jeab_: 4jea B: [223769]
        automated match to d3m79a_
        complexed with hem, so4, zn
      3. 1987418Domain d4jeac_: 4jea C: [223770]
        automated match to d3m79a_
        complexed with hem, so4, zn
      4. 1987419Domain d4jead_: 4jea D: [223771]
        automated match to d3m79a_
        complexed with hem, so4, zn
    31. Domains for 4jeb:
      1. 1987483Domain d4jeba_: 4jeb A: [223772]
        automated match to d3m15a_
        complexed with hem, zn
      2. 1987484Domain d4jebb_: 4jeb B: [223773]
        automated match to d3m15a_
        complexed with hem, zn
    32. Domains for 4u9d:
      1. 1987529Domain d4u9da_: 4u9d A: [268927]
        automated match to d3m79a_
        complexed with hem, zn
      2. 1987530Domain d4u9db_: 4u9d B: [268933]
        automated match to d3m79a_
        complexed with hem, zn
      3. 1987531Domain d4u9dc_: 4u9d C: [268932]
        automated match to d3m79a_
        complexed with hem, zn
      4. 1987532Domain d4u9dd_: 4u9d D: [268930]
        automated match to d3m79a_
        complexed with hem, zn
    33. Domain for 4u9e:
    34. Domains for 5awi:
      1. 1987477Domain d5awia_: 5awi A: [278307]
        automated match to d2bc5a_
        complexed with hem, so4, zn
      2. 1987478Domain d5awib_: 5awi B: [278308]
        automated match to d2bc5a_
        complexed with hem, so4, zn
    35. Domains for 5bu7:
      1. 2274766Domain d5bu7a_: 5bu7 A: [318067]
        automated match to d3tola_
        complexed with hem, zn
      2. 2274818Domain d5bu7b_: 5bu7 B: [318119]
        automated match to d3tola_
        complexed with hem, zn
    36. Domains for 5l31:
      1. 2281688Domain d5l31d_: 5l31 D: [324989]
        automated match to d4jeaa_
        complexed with hem, na
      2. 2281781Domain d5l31b_: 5l31 B: [325082]
        automated match to d4jeaa_
        complexed with hem, na
      3. 2281801Domain d5l31c_: 5l31 C: [325102]
        automated match to d4jeaa_
        complexed with hem, na
      4. 2281822Domain d5l31a_: 5l31 A: [325123]
        automated match to d4jeaa_
        complexed with hem, na
    37. Domains for 5l32:
      1. 2281777Domain d5l32d_: 5l32 D: [325078]
        automated match to d4jeaa_
        complexed with hem, p6g, zn
      2. 2281789Domain d5l32c_: 5l32 C: [325090]
        automated match to d4jeaa_
        complexed with hem, p6g, zn
      3. 2281806Domain d5l32b_: 5l32 B: [325107]
        automated match to d4jeaa_
        complexed with hem, p6g, zn
      4. 2281842Domain d5l32a_: 5l32 A: [325143]
        automated match to d4jeaa_
        complexed with hem, p6g, zn
  2. 1987552Salmonella enterica [TaxId:90371] [226371] (1 PDB entry)

More info for Protein automated matches from a.24.3.1: Cytochrome b562

Timeline for Protein automated matches from a.24.3.1: Cytochrome b562: