Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.24: Four-helical up-and-down bundle [47161] (29 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. Family a.24.3.1: Cytochrome b562 [47176] (2 proteins)
    automatically mapped to Pfam PF07361
  6. Protein automated matches [190502] (2 species)
    not a true protein

Species:

  1. Escherichia coli [TaxId:562] [187450] (13 PDB entries)
    1. Domains for 2bc5:
      1. Domain d2bc5a_: 2bc5 A: [163036]
        automated match to d1qq3a_
        complexed with hec, so4
      2. Domain d2bc5b_: 2bc5 B: [163037]
        automated match to d1qq3a_
        complexed with hec, so4
      3. Domain d2bc5c_: 2bc5 C: [163038]
        automated match to d1qq3a_
        complexed with hec, so4
      4. Domain d2bc5d_: 2bc5 D: [163039]
        automated match to d1qq3a_
        complexed with hec, so4
    2. Domains for 3iq5:
      1. Domain d3iq5a_: 3iq5 A: [178521]
        automated match to d1qq3a_
        complexed with hem
      2. Domain d3iq5b_: 3iq5 B: [178522]
        automated match to d1qq3a_
        complexed with hem
      3. Domain d3iq5c_: 3iq5 C: [178523]
        automated match to d1qq3a_
        complexed with hem
      4. Domain d3iq5d_: 3iq5 D: [178524]
        automated match to d1qq3a_
        complexed with hem
    3. Domains for 3iq6:
      1. Domain d3iq6a_: 3iq6 A: [178525]
        automated match to d1qq3a_
        complexed with hem, zn
      2. Domain d3iq6b_: 3iq6 B: [178526]
        automated match to d1qq3a_
        complexed with hem, zn
      3. Domain d3iq6c_: 3iq6 C: [178527]
        automated match to d1qq3a_
        complexed with hem, zn
      4. Domain d3iq6d_: 3iq6 D: [178528]
        automated match to d1qq3a_
        complexed with hem, zn
      5. Domain d3iq6e_: 3iq6 E: [178529]
        automated match to d1qq3a_
        complexed with hem, zn
      6. Domain d3iq6f_: 3iq6 F: [178530]
        automated match to d1qq3a_
        complexed with hem, zn
      7. Domain d3iq6g_: 3iq6 G: [178531]
        automated match to d1qq3a_
        complexed with hem, zn
      8. Domain d3iq6h_: 3iq6 H: [178532]
        automated match to d1qq3a_
        complexed with hem, zn
    4. Domain for 3l1m:
    5. Domains for 3qvy:
      1. Domain d3qvya_: 3qvy A: [184647]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      2. Domain d3qvyb_: 3qvy B: [184648]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      3. Domain d3qvyc_: 3qvy C: [184649]
        automated match to d1qq3a_
        complexed with hem, me7, zn
      4. Domain d3qvyd_: 3qvy D: [184650]
        automated match to d1qq3a_
        complexed with hem, me7, zn
    6. Domains for 3qvz:
      1. Domain d3qvza_: 3qvz A: [184651]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      2. Domain d3qvzb_: 3qvz B: [184652]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      3. Domain d3qvzc_: 3qvz C: [184653]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
      4. Domain d3qvzd_: 3qvz D: [184654]
        automated match to d1qq3a_
        complexed with cu, hem, me7, zn
    7. Domains for 3qw0:
      1. Domain d3qw0a_: 3qw0 A: [184655]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      2. Domain d3qw0b_: 3qw0 B: [184656]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      3. Domain d3qw0c_: 3qw0 C: [184657]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
      4. Domain d3qw0d_: 3qw0 D: [184658]
        automated match to d1qq3a_
        complexed with btb, hem, me9, zn
    8. Domains for 3qw1:
      1. Domain d3qw1a_: 3qw1 A: [184659]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      2. Domain d3qw1b_: 3qw1 B: [184660]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      3. Domain d3qw1c_: 3qw1 C: [184661]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
      4. Domain d3qw1d_: 3qw1 D: [184662]
        automated match to d1qq3a_
        complexed with hem, lcy, zn
    9. Domains for 6ai5:
      1. Domain d6ai5a_: 6ai5 A: [373980]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      2. Domain d6ai5c_: 6ai5 C: [373991]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      3. Domain d6ai5e_: 6ai5 E: [373909]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
      4. Domain d6ai5g_: 6ai5 G: [373910]
        automated match to d4u9da_
        complexed with cl, hem, mg, zn
    10. Domains for 6lde:
      1. Domain d6ldea_: 6lde A: [399556]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. Domain d6ldec_: 6lde C: [399611]
        automated match to d5xzja_
        complexed with cl, hec, zn
    11. Domains for 6ldf:
      1. Domain d6ldfa_: 6ldf A: [399613]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. Domain d6ldfc_: 6ldf C: [399591]
        automated match to d5xzja_
        complexed with cl, hec, zn
    12. Domains for 6ldg:
      1. Domain d6ldga_: 6ldg A: [399669]
        automated match to d5xzja_
        complexed with cl, hec, mg, zn
      2. Domain d6ldgc_: 6ldg C: [399569]
        automated match to d5xzja_
        complexed with cl, hec, mg, zn
    13. Domains for 7dcl:
      1. Domain d7dcla_: 7dcl A: [398833]
        automated match to d5xzja_
        complexed with cl, hec, zn
      2. Domain d7dclb_: 7dcl B: [398849]
        automated match to d5xzja_
        complexed with cl, hec, zn
  2. Salmonella enterica [TaxId:90371] [226371] (1 PDB entry)

More info for Protein automated matches from a.24.3.1: Cytochrome b562

Timeline for Protein automated matches from a.24.3.1: Cytochrome b562: