Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2382505Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2382506Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 2382773Family b.7.1.0: automated matches [191388] (1 protein)
    not a true family
  6. 2382774Protein automated matches [190497] (4 species)
    not a true protein

Species:

  1. 2382775Fruit fly (Drosophila melanogaster) [TaxId:7227] [274511] (1 PDB entry)
  2. 2382777Human (Homo sapiens) [TaxId:9606] [188711] (25 PDB entries)
    1. Domain for 2d8k:
    2. Domain for 2dmg:
    3. Domain for 2enj:
    4. Domain for 2enp:
    5. Domain for 2fk9:
    6. Domain for 2nsq:
    7. Domains for 3b7y:
      1. 2382779Domain d3b7ya_: 3b7y A: [208556]
        automated match to d3kwta_
        complexed with ca
      2. 2382780Domain d3b7yb_: 3b7y B: [208557]
        automated match to d3kwta_
        complexed with ca
    8. Domain for 3dbs:
    9. Domains for 3fbk:
      1. 2382782Domain d3fbka_: 3fbk A: [175663]
        automated match to d1dsya_
        complexed with so4
      2. 2382783Domain d3fbkb_: 3fbk B: [175664]
        automated match to d1dsya_
        complexed with so4
    10. Domains for 3fdw:
      1. 2382796Domain d3fdwa_: 3fdw A: [232160]
        automated match to d1v27a_
      2. 2382797Domain d3fdwb_: 3fdw B: [232159]
        automated match to d1v27a_
    11. Domain for 3zvv:
    12. Domain for 4anu:
    13. Domain for 4anv:
    14. Domain for 4anw:
    15. Domain for 4anx:
    16. Domain for 4hle:
    17. Domain for 4j6i:
    18. Domain for 4mjj:
    19. Domain for 4urk:
    20. Domain for 5g55:
    21. Domain for 5h4y:
    22. Domains for 5h4z:
      1. 2382807Domain d5h4za_: 5h4z A: [326674]
        automated match to d1w15a_
        complexed with ca, cl; mutant
      2. 2382808Domain d5h4zb_: 5h4z B: [326692]
        automated match to d1w15a_
        complexed with ca, cl; mutant
    23. Domains for 6bty:
      1. 2382784Domain d6btya_: 6bty A: [359016]
        Other proteins in same PDB: d6btyb2
        automated match to d1rh8a_
        complexed with o4b
      2. 2382785Domain d6btyb1: 6bty B:1559-1683 [358808]
        Other proteins in same PDB: d6btyb2
        automated match to d1rh8a_
        complexed with o4b
    24. Domains for 6btz:
      1. 2382786Domain d6btza_: 6btz A: [358809]
        automated match to d1rh8a_
        complexed with gol, o4b, so4
      2. 2382787Domain d6btzb_: 6btz B: [358861]
        automated match to d1rh8a_
        complexed with gol, o4b, so4
      3. 2382788Domain d6btzc_: 6btz C: [358945]
        automated match to d1rh8a_
        complexed with gol, o4b, so4
      4. 2382789Domain d6btzd_: 6btz D: [359105]
        automated match to d1rh8a_
        complexed with gol, o4b, so4
    25. Domains for 6bu0:
      1. 2382801Domain d6bu0a_: 6bu0 A: [358841]
        Other proteins in same PDB: d6bu0b2, d6bu0c2
        automated match to d1rh8a_
        complexed with fmt, ihp, o4b
      2. 2382802Domain d6bu0b1: 6bu0 B:1559-1683 [359099]
        Other proteins in same PDB: d6bu0b2, d6bu0c2
        automated match to d1rh8a_
        complexed with fmt, ihp, o4b
      3. 2382803Domain d6bu0c1: 6bu0 C:1559-1684 [358810]
        Other proteins in same PDB: d6bu0b2, d6bu0c2
        automated match to d1rh8a_
        complexed with fmt, ihp, o4b
  3. 2382813Mouse (Mus musculus) [TaxId:10090] [187441] (4 PDB entries)
    1. Domains for 2b3r:
      1. 2382815Domain d2b3ra1: 2b3r A:1384-1505 [162989]
        Other proteins in same PDB: d2b3ra2, d2b3rb2
        automated match to d2bwqa1
        complexed with so4
      2. 2382816Domain d2b3rb1: 2b3r B:1384-1505 [162990]
        Other proteins in same PDB: d2b3ra2, d2b3rb2
        automated match to d2bwqa1
        complexed with so4
    2. Domain for 2k3h:
    3. Domain for 3n5a:
    4. Domain for 6lcy:
  4. 2382819Norway rat (Rattus norvegicus) [TaxId:10116] [189223] (11 PDB entries)
    1. Domain for 2chd:
    2. Domain for 3kwt:
    3. Domain for 3kwu:
    4. Domains for 4lcv:
      1. 2382825Domain d4lcva_: 4lcv A: [235325]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      2. 2382826Domain d4lcvb1: 4lcv B:125-254 [235326]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      3. 2382827Domain d4lcvc_: 4lcv C: [235324]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      4. 2382828Domain d4lcvd_: 4lcv D: [227893]
        Other proteins in same PDB: d4lcvb2
        automated match to d2chda_
        complexed with bme, ca, flc, so4
    5. Domain for 4ldc:
    6. Domain for 4lt7:
    7. Domain for 4np9:
    8. Domain for 4ns0:
    9. Domain for 6anj:
    10. Domains for 6ank:
      1. 2382832Domain d6anka1: 6ank A:135-259 [339050]
        automated match to d2k8ma1
        complexed with ca, edo
      2. 2382833Domain d6anka2: 6ank A:266-402 [339051]
        automated match to d2k8ma1
        complexed with ca, edo
      3. 2382834Domain d6ankb1: 6ank B:135-259 [344476]
        automated match to d6anka1
        complexed with ca, edo
      4. 2382835Domain d6ankb2: 6ank B:266-403 [344477]
        automated match to d6anka2
        complexed with ca, edo
    11. Domain for 6nyc:

More info for Protein automated matches from b.7.1.0: automated matches

Timeline for Protein automated matches from b.7.1.0: automated matches: