Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2038038Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2038039Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 2038265Family b.7.1.0: automated matches [191388] (1 protein)
    not a true family
  6. 2038266Protein automated matches [190497] (4 species)
    not a true protein

Species:

  1. 2038267Fruit fly (Drosophila melanogaster) [TaxId:7227] [274511] (1 PDB entry)
  2. 2038269Human (Homo sapiens) [TaxId:9606] [188711] (22 PDB entries)
    1. Domain for 2d8k:
    2. Domain for 2dmg:
    3. Domain for 2enj:
    4. Domain for 2enp:
    5. Domain for 2fk9:
    6. Domain for 2nsq:
    7. Domains for 3b7y:
      1. 2038271Domain d3b7ya_: 3b7y A: [208556]
        automated match to d3kwta_
        complexed with ca
      2. 2038272Domain d3b7yb_: 3b7y B: [208557]
        automated match to d3kwta_
        complexed with ca
    8. Domain for 3dbs:
    9. Domains for 3fbk:
      1. 2038274Domain d3fbka_: 3fbk A: [175663]
        automated match to d1dsya_
        complexed with so4
      2. 2038275Domain d3fbkb_: 3fbk B: [175664]
        automated match to d1dsya_
        complexed with so4
    10. Domains for 3fdw:
      1. 2038276Domain d3fdwa_: 3fdw A: [232160]
        automated match to d1v27a_
      2. 2038277Domain d3fdwb_: 3fdw B: [232159]
        automated match to d1v27a_
    11. Domain for 3zvv:
    12. Domain for 4anu:
    13. Domain for 4anv:
    14. Domain for 4anw:
    15. Domain for 4anx:
    16. Domain for 4hle:
    17. Domain for 4j6i:
    18. Domain for 4mjj:
    19. Domain for 4urk:
    20. Domain for 5g55:
    21. Domain for 5h4y:
    22. Domains for 5h4z:
      1. 2283373Domain d5h4za_: 5h4z A: [326674]
        automated match to d1w15a_
        complexed with ca, cl; mutant
      2. 2283391Domain d5h4zb_: 5h4z B: [326692]
        automated match to d1w15a_
        complexed with ca, cl; mutant
  3. 2038292Mouse (Mus musculus) [TaxId:10090] [187441] (3 PDB entries)
    1. Domains for 2b3r:
      1. 2038294Domain d2b3ra1: 2b3r A:1384-1505 [162989]
        Other proteins in same PDB: d2b3ra2, d2b3rb2
        automated match to d2bwqa1
        complexed with so4
      2. 2038295Domain d2b3rb1: 2b3r B:1384-1505 [162990]
        Other proteins in same PDB: d2b3ra2, d2b3rb2
        automated match to d2bwqa1
        complexed with so4
    2. Domain for 2k3h:
    3. Domain for 3n5a:
  4. 2038297Norway rat (Rattus norvegicus) [TaxId:10116] [189223] (10 PDB entries)
    1. Domain for 2chd:
    2. Domain for 3kwt:
    3. Domain for 3kwu:
    4. Domains for 4lcv:
      1. 2038303Domain d4lcva_: 4lcv A: [235325]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      2. 2038304Domain d4lcvb1: 4lcv B:125-254 [235326]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      3. 2038305Domain d4lcvc_: 4lcv C: [235324]
        Other proteins in same PDB: d4lcvb2
        automated match to d4lcvd_
        complexed with bme, ca, flc, so4
      4. 2038306Domain d4lcvd_: 4lcv D: [227893]
        Other proteins in same PDB: d4lcvb2
        automated match to d2chda_
        complexed with bme, ca, flc, so4
    5. Domain for 4ldc:
    6. Domain for 4lt7:
    7. Domain for 4np9:
    8. Domain for 4ns0:
    9. Domain for 6anj:
    10. Domains for 6ank:
      1. 2295749Domain d6anka1: 6ank A:135-259 [339050]
        automated match to d2k8ma1
        complexed with ca, edo
      2. 2295750Domain d6anka2: 6ank A:266-402 [339051]
        automated match to d2k8ma1
        complexed with ca, edo

More info for Protein automated matches from b.7.1.0: automated matches

Timeline for Protein automated matches from b.7.1.0: automated matches: