Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2569071Fold d.85: RNA bacteriophage capsid protein [55404] (1 superfamily)
    6-standed beta-sheet followed with 2 helices; meander
  4. 2569072Superfamily d.85.1: RNA bacteriophage capsid protein [55405] (1 family) (S)
  5. 2569073Family d.85.1.1: RNA bacteriophage capsid protein [55406] (6 proteins)
  6. 2569238Protein automated matches [190495] (3 species)
    not a true protein

Species:

  1. 2569239Bacteriophage MS2 [TaxId:12022] [187484] (2 PDB entries)
    1. Domains for 2bny:
      1. 2569240Domain d2bnya_: 2bny A: [241313]
        automated match to d2bs1a_
        protein/RNA complex; mutant
      2. 2569241Domain d2bnyb_: 2bny B: [241314]
        automated match to d2bs1a_
        protein/RNA complex; mutant
      3. 2569242Domain d2bnyc_: 2bny C: [241315]
        automated match to d2bs1a_
        protein/RNA complex; mutant
    2. Domains for 2bs1:
      1. 2569243Domain d2bs1a_: 2bs1 A: [163151]
        automated match to d1u1ya_
        protein/RNA complex; mutant
      2. 2569244Domain d2bs1b_: 2bs1 B: [163152]
        automated match to d1u1ya_
        protein/RNA complex; mutant
      3. 2569245Domain d2bs1c_: 2bs1 C: [163153]
        automated match to d1u1ya_
        protein/RNA complex; mutant
  2. 2569246Enterobacteria phage [TaxId:12022] [187438] (2 PDB entries)
    1. Domains for 2b2d:
      1. 2569250Domain d2b2da_: 2b2d A: [162973]
        automated match to d1u1ya_
        protein/RNA complex; mutant
      2. 2569251Domain d2b2db_: 2b2d B: [162974]
        automated match to d1u1ya_
        protein/RNA complex; mutant
      3. 2569252Domain d2b2dc_: 2b2d C: [162975]
        automated match to d1u1ya_
        protein/RNA complex; mutant
    2. Domains for 2b2e:
      1. 2569247Domain d2b2ea_: 2b2e A: [241250]
        automated match to d2b2da_
        protein/RNA complex; mutant
      2. 2569248Domain d2b2eb_: 2b2e B: [241251]
        automated match to d2b2da_
        protein/RNA complex; mutant
      3. 2569249Domain d2b2ec_: 2b2e C: [241252]
        automated match to d2b2da_
        protein/RNA complex; mutant
  3. 2569253Pseudomonas phage [TaxId:12023] [188304] (2 PDB entries)
    1. Domains for 2qud:
      1. 2569254Domain d2quda1: 2qud A:0-127 [167810]
        Other proteins in same PDB: d2quda2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      2. 2569255Domain d2qudb_: 2qud B: [167811]
        Other proteins in same PDB: d2quda2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
    2. Domains for 2qux:
      1. 2569256Domain d2quxa1: 2qux A:0-127 [167818]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      2. 2569257Domain d2quxb_: 2qux B: [167819]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      3. 2569258Domain d2quxd_: 2qux D: [167820]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      4. 2569259Domain d2quxe_: 2qux E: [167821]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      5. 2569260Domain d2quxg1: 2qux G:0-127 [167822]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      6. 2569261Domain d2quxh_: 2qux H: [167823]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      7. 2569262Domain d2quxj1: 2qux J:0-127 [167824]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      8. 2569263Domain d2quxk1: 2qux K:0-127 [167825]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      9. 2569264Domain d2quxm_: 2qux M: [167826]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      10. 2569265Domain d2quxn_: 2qux N: [167827]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      11. 2569266Domain d2quxp_: 2qux P: [167828]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol
      12. 2569267Domain d2quxq_: 2qux Q: [167829]
        Other proteins in same PDB: d2quxa2, d2quxg2, d2quxj2, d2quxk2
        automated match to d1dwna_
        protein/RNA complex; complexed with gol

More info for Protein automated matches from d.85.1.1: RNA bacteriophage capsid protein

Timeline for Protein automated matches from d.85.1.1: RNA bacteriophage capsid protein: