Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1851756Fold c.45: (Phosphotyrosine protein) phosphatases II [52798] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423
  4. 1851757Superfamily c.45.1: (Phosphotyrosine protein) phosphatases II [52799] (6 families) (S)
    share with the family I the common active site structure with a circularly permuted topology
  5. 1852137Family c.45.1.0: automated matches [191381] (1 protein)
    not a true family
  6. 1852138Protein automated matches [190475] (8 species)
    not a true protein

Species:

  1. 1852139Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [267784] (1 PDB entry)
  2. 1852142Chicken (Gallus gallus) [TaxId:9031] [193897] (1 PDB entry)
  3. 1852145Fruit fly (Drosophila melanogaster) [TaxId:7227] [226240] (2 PDB entries)
    1. Domains for 3s3e:
      1. 1852146Domain d3s3ea_: 3s3e A: [216190]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
      2. 1852147Domain d3s3eb_: 3s3e B: [216191]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
    2. Domains for 3s3f:
      1. 1852148Domain d3s3fa_: 3s3f A: [216192]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
      2. 1852149Domain d3s3fb_: 3s3f B: [216193]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
  4. 1852150Human (Homo sapiens) [TaxId:9606] [187400] (99 PDB entries)
    1. Domain for 1wrm:
    2. Domains for 1yz4:
      1. 1852253Domain d1yz4a_: 1yz4 A: [162339]
        automated match to d1m3ga_
        complexed with bog, so4
      2. 1852254Domain d1yz4b_: 1yz4 B: [162340]
        automated match to d1m3ga_
        complexed with bog, so4
    3. Domain for 1zc0:
    4. Domains for 1zzw:
      1. 1852162Domain d1zzwa_: 1zzw A: [162637]
        automated match to d1mkpa_
        complexed with edo, so4
      2. 1852163Domain d1zzwb_: 1zzw B: [162638]
        automated match to d1mkpa_
        complexed with edo, so4
    5. Domain for 2a8b:
    6. Domains for 2ahs:
      1. 1852194Domain d2ahsa_: 2ahs A: [162814]
        automated match to d1rpma_
        complexed with cl, edo, na
      2. 1852195Domain d2ahsb_: 2ahs B: [162815]
        automated match to d1rpma_
        complexed with cl, edo, na
    7. Domain for 2b3o:
    8. Domain for 2b49:
    9. Domain for 2bij:
    10. Domain for 2bv5:
    11. Domain for 2bzl:
    12. Domain for 2c7s:
    13. Domain for 2cfv:
    14. Domain for 2cjz:
    15. Domain for 2esb:
    16. Domains for 2g59:
      1. 1852221Domain d2g59a_: 2g59 A: [197935]
        automated match to d2g59b_
        complexed with po4
      2. 1852222Domain d2g59b_: 2g59 B: [193826]
        automated match to d2hc1a_
        complexed with po4
    17. Domains for 2g6z:
      1. 1852280Domain d2g6za_: 2g6z A: [241904]
        automated match to d3ezza_
        complexed with so4
      2. 1852281Domain d2g6zb_: 2g6z B: [241905]
        automated match to d3ezza_
        complexed with so4
      3. 1852282Domain d2g6zc_: 2g6z C: [241906]
        automated match to d3ezza_
        complexed with so4
    18. Domains for 2gjt:
      1. 1852209Domain d2gjta_: 2gjt A: [193823]
        automated match to d2hc1a_
        complexed with cl
      2. 1852210Domain d2gjtb_: 2gjt B: [197957]
        automated match to d2gjta_
        complexed with cl
    19. Domain for 2gp0:
    20. Domains for 2gwo:
      1. 1852248Domain d2gwoa_: 2gwo A: [264293]
        automated match to d2y96a_
      2. 1852249Domain d2gwob_: 2gwo B: [264294]
        automated match to d2y96a_
      3. 1852250Domain d2gwoc_: 2gwo C: [264295]
        automated match to d2y96a_
      4. 1852251Domain d2gwod_: 2gwo D: [264296]
        automated match to d2y96a_
    21. Domains for 2h02:
      1. 1852240Domain d2h02a_: 2h02 A: [197994]
        automated match to d2h04a_
        complexed with 2un
      2. 1852241Domain d2h02b_: 2h02 B: [193819]
        automated match to d2hc1a_
        complexed with 2un
    22. Domain for 2h03:
    23. Domain for 2h04:
    24. Domains for 2h4v:
      1. 1852155Domain d2h4va_: 2h4v A: [230759]
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
      2. 1852156Domain d2h4vb_: 2h4v B: [230760]
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
    25. Domain for 2hc1:
    26. Domain for 2hc2:
    27. Domain for 2hvl:
    28. Domains for 2hy3:
      1. 1852274Domain d2hy3a_: 2hy3 A: [204656]
        automated match to d1yfoa_
        complexed with vo4
      2. 1852275Domain d2hy3b_: 2hy3 B: [204657]
        automated match to d1yfoa_
        complexed with vo4
    29. Domains for 2i1y:
      1. 1852235Domain d2i1ya_: 2i1y A: [204684]
        automated match to d1oesa_
        complexed with gol
      2. 1852236Domain d2i1yb_: 2i1y B: [204685]
        automated match to d1oesa_
        complexed with gol
    30. Domains for 2i3r:
      1. 1852192Domain d2i3ra_: 2i3r A: [204695]
        automated match to d2h02b_
        complexed with cl
      2. 1852193Domain d2i3rb_: 2i3r B: [204696]
        automated match to d2h02b_
        complexed with cl
    31. Domain for 2i3u:
    32. Domains for 2i4e:
      1. 1852180Domain d2i4ea_: 2i4e A: [204704]
        automated match to d2h04a_
        complexed with vo4
      2. 1852181Domain d2i4eb_: 2i4e B: [204705]
        automated match to d2h04a_
        complexed with vo4
    33. Domain for 2i4g:
    34. Domain for 2i4h:
    35. Domains for 2i5x:
      1. 1852172Domain d2i5xa_: 2i5x A: [204716]
        automated match to d2h04a_
        complexed with cl, mg, ua5
      2. 1852173Domain d2i5xb_: 2i5x B: [204717]
        automated match to d2h04a_
        complexed with cl, mg, ua5
    36. Domain for 2i75:
    37. Domains for 2nlk:
      1. 1852264Domain d2nlka1: 2nlk A:827-1160 [264417]
        automated match to d1lara1
      2. 1852265Domain d2nlka2: 2nlk A:1168-1412 [264418]
        automated match to d1lara2
    38. Domains for 2nt2:
      1. 1852201Domain d2nt2a_: 2nt2 A: [166343]
        automated match to d1m3ga_
        complexed with so4
      2. 1852202Domain d2nt2b_: 2nt2 B: [166344]
        automated match to d1m3ga_
        complexed with so4
      3. 1852203Domain d2nt2c_: 2nt2 C: [166345]
        automated match to d1m3ga_
        complexed with so4
    39. Domain for 2nz6:
    40. Domain for 2oc3:
    41. Domain for 2oud:
    42. Domains for 2p6x:
      1. 1852187Domain d2p6xa_: 2p6x A: [231137]
        automated match to d2p6xb_
        complexed with cl, edo
      2. 1852188Domain d2p6xb_: 2p6x B: [205453]
        automated match to d2h04a_
        complexed with cl, edo
    43. Domain for 2pbn:
    44. Domains for 2pq5:
      1. 1852259Domain d2pq5a_: 2pq5 A: [264446]
        automated match to d2y96a_
      2. 1852260Domain d2pq5b_: 2pq5 B: [264447]
        automated match to d2y96a_
      3. 1852261Domain d2pq5c_: 2pq5 C: [264448]
        automated match to d2y96a_
      4. 1852262Domain d2pq5d_: 2pq5 D: [264449]
        automated match to d2y96a_
    45. Domains for 2qcj:
      1. 1852291Domain d2qcja_: 2qcj A: [243530]
        automated match to d3s3ea_
      2. 1852292Domain d2qcjb_: 2qcj B: [243531]
        automated match to d3s3ea_
    46. Domains for 2qct:
      1. 1852287Domain d2qcta_: 2qct A: [231198]
        automated match to d3h2xa_
        complexed with 561, edo
      2. 1852288Domain d2qctb_: 2qct B: [231197]
        automated match to d3h2xa_
        complexed with 561, edo
    47. Domain for 2qdc:
    48. Domain for 2qdm:
    49. Domain for 2qdp:
    50. Domains for 2qep:
      1. 1852268Domain d2qepa_: 2qep A: [231203]
        automated match to d2i1yb_
        complexed with cl
      2. 1852269Domain d2qepb_: 2qep B: [231204]
        automated match to d2i1yb_
        complexed with cl
    51. Domain for 2r0b:
    52. Domains for 2wgp:
      1. 1852184Domain d2wgpa_: 2wgp A: [264533]
        automated match to d2esba_
        complexed with po4
      2. 1852185Domain d2wgpb_: 2wgp B: [264534]
        automated match to d2esba_
        complexed with po4
    53. Domains for 2y96:
      1. 1852242Domain d2y96a_: 2y96 A: [244711]
        automated match to d1vhra_
        complexed with so4
      2. 1852243Domain d2y96b_: 2y96 B: [244712]
        automated match to d1vhra_
        complexed with so4
    54. Domain for 3b7o:
    55. Domain for 3d42:
    56. Domain for 3d44:
    57. Domain for 3h2x:
    58. Domain for 3mow:
    59. Domain for 3o4s:
    60. Domain for 3o4t:
    61. Domain for 3o4u:
    62. Domain for 3o5x:
    63. Domain for 3ps5:
    64. Domains for 3qcb:
      1. 1852237Domain d3qcba_: 3qcb A: [215149]
        automated match to d1yfoa_
        complexed with so4
      2. 1852238Domain d3qcbb_: 3qcb B: [215150]
        automated match to d1yfoa_
        complexed with so4
    65. Domains for 3qcc:
      1. 1852224Domain d3qcca_: 3qcc A: [215151]
        automated match to d1yfoa_
        complexed with vo4
      2. 1852225Domain d3qccb_: 3qcc B: [215152]
        automated match to d1yfoa_
        complexed with vo4
    66. Domain for 3qcd:
    67. Domains for 3qce:
      1. 1852228Domain d3qcea_: 3qce A: [215154]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 1852229Domain d3qceb_: 3qce B: [215155]
        automated match to d1yfoa_
        complexed with nxy, so4
    68. Domains for 3qcf:
      1. 1852270Domain d3qcfa_: 3qcf A: [215156]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 1852271Domain d3qcfb_: 3qcf B: [215157]
        automated match to d1yfoa_
        complexed with nxy, so4
    69. Domain for 3qcg:
    70. Domain for 3qch:
    71. Domain for 3qci:
    72. Domain for 3qcj:
    73. Domain for 3qck:
    74. Domain for 3qcl:
    75. Domains for 3qcm:
      1. 1852246Domain d3qcma_: 3qcm A: [215164]
        automated match to d1yfoa_
        complexed with mes, nxw
      2. 1852247Domain d3qcmb_: 3qcm B: [215165]
        automated match to d1yfoa_
        complexed with mes, nxw
    76. Domain for 3qcn:
    77. Domain for 3s4e:
    78. Domain for 3zm0:
    79. Domain for 3zm1:
    80. Domain for 3zm2:
    81. Domain for 3zm3:
    82. Domain for 4d3p:
    83. Domains for 4d3q:
      1. 1852212Domain d4d3qa_: 4d3q A: [278945]
        automated match to d3s4ea_
        complexed with so4
      2. 1852213Domain d4d3qb_: 4d3q B: [278946]
        automated match to d3s4ea_
        complexed with so4
    84. Domain for 4d3r:
    85. Domain for 4ikc:
    86. Domains for 4j51:
      1. 1852233Domain d4j51a_: 4j51 A: [240281]
        automated match to d4j51b_
        complexed with n75
      2. 1852234Domain d4j51b_: 4j51 B: [234925]
        automated match to d3h2xa_
        complexed with n75
    87. Domains for 4jmk:
      1. 1852218Domain d4jmka_: 4jmk A: [237170]
        automated match to d3lj8a_
        complexed with so4
      2. 1852219Domain d4jmkb_: 4jmk B: [237171]
        automated match to d3lj8a_
        complexed with so4
    88. Domains for 4nwf:
      1. 1852276Domain d4nwfa3: 4nwf A:219-533 [261536]
        Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
        automated match to d2b3oa3
        complexed with edo, gol; mutant
      2. 1852277Domain d4nwfb3: 4nwf B:219-533 [261533]
        Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
        automated match to d2b3oa3
        complexed with edo, gol; mutant
    89. Domains for 4nwg:
      1. 1852289Domain d4nwga3: 4nwg A:219-534 [261535]
        Other proteins in same PDB: d4nwga1, d4nwga2, d4nwgb1, d4nwgb2
        automated match to d2b3oa3
        complexed with edo, peg, so4; mutant
      2. 1852290Domain d4nwgb3: 4nwg B:219-533 [263233]
        Other proteins in same PDB: d4nwga1, d4nwga2, d4nwgb1, d4nwgb2
        automated match to d2b3oa3
        complexed with edo, peg, so4; mutant
    90. Domain for 4ohd:
    91. Domain for 4ohe:
    92. Domain for 4ohh:
    93. Domain for 4ohi:
    94. Domains for 4ohl:
      1. 1852272Domain d4ohla3: 4ohl A:219-526 [259864]
        Other proteins in same PDB: d4ohla1, d4ohla2, d4ohlb1, d4ohlb2
        automated match to d2b3oa3
        mutant
      2. 1852273Domain d4ohlb3: 4ohl B:219-526 [263290]
        Other proteins in same PDB: d4ohla1, d4ohla2, d4ohlb1, d4ohlb2
        automated match to d2b3oa3
        mutant
    95. Domains for 4qun:
      1. 1852207Domain d4quna_: 4qun A: [261551]
        automated match to d2cfva_
        complexed with gol, po4; mutant
      2. 1852208Domain d4qunb_: 4qun B: [261552]
        automated match to d2cfva_
        complexed with gol, po4; mutant
    96. Domain for 4rdd:
    97. Domains for 4ri4:
      1. 1852204Domain d4ri4a_: 4ri4 A: [269849]
        automated match to d2cfva_
        complexed with vo4; mutant
      2. 1852205Domain d4ri4b_: 4ri4 B: [269850]
        automated match to d2cfva_
        complexed with vo4; mutant
    98. Domains for 4ri5:
      1. 1852157Domain d4ri5a_: 4ri5 A: [269852]
        automated match to d2cfva_
        complexed with gol, vn4; mutant
      2. 1852158Domain d4ri5b_: 4ri5 B: [269851]
        automated match to d2cfva_
        complexed with gol, vn4; mutant
    99. Domain for 4woh:
  5. 1852293Mouse (Mus musculus) [TaxId:10090] [193198] (1 PDB entry)
  6. 1852295Norway rat (Rattus norvegicus) [TaxId:10116] [225183] (2 PDB entries)
    1. Domains for 2nv5:
      1. 1852297Domain d2nv5a_: 2nv5 A: [205182]
        automated match to d2ooqb_
      2. 1852298Domain d2nv5b_: 2nv5 B: [205183]
        automated match to d2ooqb_
      3. 1852299Domain d2nv5c_: 2nv5 C: [205184]
        automated match to d2ooqb_
    2. Domain for 3i36:
  7. 1852300Trypanosoma cruzi [TaxId:5693] [267919] (1 PDB entry)
  8. 1852303Trypanosome (Trypanosoma brucei) [TaxId:5691] [255955] (1 PDB entry)

More info for Protein automated matches from c.45.1.0: automated matches

Timeline for Protein automated matches from c.45.1.0: automated matches: