SCOPe 2.04: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.04
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.45: (Phosphotyrosine protein) phosphatases II [52798] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423
Superfamily c.45.1: (Phosphotyrosine protein) phosphatases II [52799] (6 families)
share with the family I the common active site structure with a circularly permuted topology
Family c.45.1.0: automated matches [191381] (1 protein)
not a true family
Protein automated matches [190475] (6 species)
not a true protein

Species:

Chicken (Gallus gallus) [TaxId:9031] [193897] (1 PDB entry)
- Domains for 2pi7:
  1. Domain d2pi7a_: 2pi7 A: [198254]
    automated match to d2pi7b_
    complexed with no3
  2. Domain d2pi7b_: 2pi7 B: [193898]
    automated match to d2hc1a_
    complexed with no3
Fruit fly (Drosophila melanogaster) [TaxId:7227] [226240] (2 PDB entries)
1. Domains for 3s3e:
  1. Domain d3s3ea_: 3s3e A: [216190]
    automated match to d2h04a_
    complexed with 1bo, bu1, ipa
  2. Domain d3s3eb_: 3s3e B: [216191]
    automated match to d2h04a_
    complexed with 1bo, bu1, ipa
2. Domains for 3s3f:
  1. Domain d3s3fa_: 3s3f A: [216192]
    automated match to d2h04a_
    complexed with 1bo, bu1, ipa, vo4
  2. Domain d3s3fb_: 3s3f B: [216193]
    automated match to d2h04a_
    complexed with 1bo, bu1, ipa, vo4
Human (Homo sapiens) [TaxId:9606] [187400] (86 PDB entries)
1. Domain for 1wrm:
  - Domain d1wrma_: 1wrm A: [193837]
    automated match to d1yz4a_
    complexed with mes
2. Domains for 1yz4:
  1. Domain d1yz4a_: 1yz4 A: [162339]
    automated match to d1m3ga_
    complexed with bog, so4
  2. Domain d1yz4b_: 1yz4 B: [162340]
    automated match to d1m3ga_
    complexed with bog, so4
3. Domain for 1zc0:
  - Domain d1zc0a_: 1zc0 A: [162439]
    automated match to d1jlna_
    complexed with po4
4. Domains for 1zzw:
  1. Domain d1zzwa_: 1zzw A: [162637]
    automated match to d1mkpa_
    complexed with edo, so4
  2. Domain d1zzwb_: 1zzw B: [162638]
    automated match to d1mkpa_
    complexed with edo, so4
5. Domain for 2a8b:
  - Domain d2a8ba_: 2a8b A: [203401]
    automated match to d1yfoa_
    complexed with cl
6. Domains for 2ahs:
  1. Domain d2ahsa_: 2ahs A: [162814]
    automated match to d1rpma_
    complexed with cl, edo, na
  2. Domain d2ahsb_: 2ahs B: [162815]
    automated match to d1rpma_
    complexed with cl, edo, na
7. Domain for 2b3o:
  - Domain d2b3oa3: 2b3o A:216-526 [241258]
    Other proteins in same PDB: d2b3oa1, d2b3oa2
    automated match to d2shpa1
8. Domain for 2b49:
  - Domain d2b49a_: 2b49 A: [203544]
    automated match to d2hc2a_
9. Domain for 2bij:
  - Domain d2bija_: 2bij A: [203604]
    automated match to d3o4ua_
    complexed with so4
10. Domain for 2bv5:
  - Domain d2bv5a_: 2bv5 A: [230551]
    automated match to d2a8ba_
    complexed with gol, so4
11. Domain for 2bzl:
  - Domain d2bzla_: 2bzl A: [241395]
    automated match to d2nz6a_
    complexed with edo, so4
12. Domain for 2c7s:
  - Domain d2c7sa_: 2c7s A: [230582]
    automated match to d3qcea_
    complexed with act
13. Domain for 2cfv:
  - Domain d2cfva_: 2cfv A: [230605]
    automated match to d2h02b_
    complexed with cl, ni
14. Domain for 2cjz:
  - Domain d2cjza_: 2cjz A: [203799]
    automated match to d2hvla_
    complexed with edo, ptr; mutant
15. Domain for 2esb:
  - Domain d2esba_: 2esb A: [241790]
    automated match to d1wrma_
    complexed with act, epe
16. Domains for 2g59:
  1. Domain d2g59a_: 2g59 A: [197935]
    automated match to d2g59b_
    complexed with po4
  2. Domain d2g59b_: 2g59 B: [193826]
    automated match to d2hc1a_
    complexed with po4
17. Domains for 2g6z:
  1. Domain d2g6za_: 2g6z A: [241904]
    automated match to d3ezza_
    complexed with so4
  2. Domain d2g6zb_: 2g6z B: [241905]
    automated match to d3ezza_
    complexed with so4
  3. Domain d2g6zc_: 2g6z C: [241906]
    automated match to d3ezza_
    complexed with so4
18. Domains for 2gjt:
  1. Domain d2gjta_: 2gjt A: [193823]
    automated match to d2hc1a_
    complexed with cl
  2. Domain d2gjtb_: 2gjt B: [197957]
    automated match to d2gjta_
    complexed with cl
19. Domain for 2gp0:
  - Domain d2gp0a_: 2gp0 A: [164789]
    automated match to d1jlna_
    complexed with gol, po4; mutant
20. Domains for 2h02:
  1. Domain d2h02a_: 2h02 A: [197994]
    automated match to d2h04a_
    complexed with 2un
  2. Domain d2h02b_: 2h02 B: [193819]
    automated match to d2hc1a_
    complexed with 2un
21. Domain for 2h03:
  - Domain d2h03a_: 2h03 A: [164885]
    automated match to d1rpma_
    complexed with 3un, cl, mg
22. Domain for 2h04:
  - Domain d2h04a_: 2h04 A: [193818]
    automated match to d2hc1a_
    complexed with 4un
23. Domains for 2h4v:
  1. Domain d2h4va_: 2h4v A: [230759]
    automated match to d3qcea_
    complexed with act, cl, edo, flc, na
  2. Domain d2h4vb_: 2h4v B: [230760]
    automated match to d3qcea_
    complexed with act, cl, edo, flc, na
24. Domain for 2hc1:
  - Domain d2hc1a_: 2hc1 A: [165046]
    automated match to d1rpma_
    complexed with act, cl
25. Domain for 2hc2:
  - Domain d2hc2a_: 2hc2 A: [165047]
    automated match to d1rpma_
    complexed with mg, na
26. Domain for 2hvl:
  - Domain d2hvla_: 2hvl A: [165309]
    automated match to d1jlna_
    complexed with gol, po4; mutant
27. Domains for 2hy3:
  1. Domain d2hy3a_: 2hy3 A: [204656]
    automated match to d1yfoa_
    complexed with vo4
  2. Domain d2hy3b_: 2hy3 B: [204657]
    automated match to d1yfoa_
    complexed with vo4
28. Domains for 2i1y:
  1. Domain d2i1ya_: 2i1y A: [204684]
    automated match to d1oesa_
    complexed with gol
  2. Domain d2i1yb_: 2i1y B: [204685]
    automated match to d1oesa_
    complexed with gol
29. Domains for 2i3r:
  1. Domain d2i3ra_: 2i3r A: [204695]
    automated match to d2h02b_
    complexed with cl
  2. Domain d2i3rb_: 2i3r B: [204696]
    automated match to d2h02b_
    complexed with cl
30. Domain for 2i3u:
  - Domain d2i3ua_: 2i3u A: [204697]
    automated match to d2h04a_
31. Domains for 2i4e:
  1. Domain d2i4ea_: 2i4e A: [204704]
    automated match to d2h04a_
    complexed with vo4
  2. Domain d2i4eb_: 2i4e B: [204705]
    automated match to d2h04a_
    complexed with vo4
32. Domain for 2i4g:
  - Domain d2i4ga_: 2i4g A: [204706]
    automated match to d2h04a_
    complexed with cl, ua1
33. Domain for 2i4h:
  - Domain d2i4ha_: 2i4h A: [204707]
    automated match to d2h04a_
    complexed with cl, mg, ua1
34. Domains for 2i5x:
  1. Domain d2i5xa_: 2i5x A: [204716]
    automated match to d2h04a_
    complexed with cl, mg, ua5
  2. Domain d2i5xb_: 2i5x B: [204717]
    automated match to d2h04a_
    complexed with cl, mg, ua5
35. Domain for 2i75:
  - Domain d2i75a_: 2i75 A: [242092]
    automated match to d4ikca_
    complexed with so4
36. Domains for 2nt2:
  1. Domain d2nt2a_: 2nt2 A: [166343]
    automated match to d1m3ga_
    complexed with so4
  2. Domain d2nt2b_: 2nt2 B: [166344]
    automated match to d1m3ga_
    complexed with so4
  3. Domain d2nt2c_: 2nt2 C: [166345]
    automated match to d1m3ga_
    complexed with so4
37. Domain for 2nz6:
  - Domain d2nz6a_: 2nz6 A: [230986]
    automated match to d2h04a_
    complexed with cl, ni, po4; mutant
38. Domain for 2oc3:
  - Domain d2oc3a_: 2oc3 A: [243314]
    automated match to d4ikca_
39. Domain for 2oud:
  - Domain d2ouda_: 2oud A: [205368]
    automated match to d1zzwb_
    complexed with cl
40. Domains for 2p6x:
  1. Domain d2p6xa_: 2p6x A: [231137]
    automated match to d2p6xb_
    complexed with cl, edo
  2. Domain d2p6xb_: 2p6x B: [205453]
    automated match to d2h04a_
    complexed with cl, edo
41. Domain for 2pbn:
  - Domain d2pbna_: 2pbn A: [205487]
    automated match to d1yfoa_
    complexed with so4
42. Domains for 2qcj:
  1. Domain d2qcja_: 2qcj A: [243530]
    automated match to d3s3ea_
  2. Domain d2qcjb_: 2qcj B: [243531]
    automated match to d3s3ea_
43. Domains for 2qct:
  1. Domain d2qcta_: 2qct A: [231198]
    automated match to d3h2xa_
    complexed with 561, edo
  2. Domain d2qctb_: 2qct B: [231197]
    automated match to d3h2xa_
    complexed with 561, edo
44. Domain for 2qdc:
  - Domain d2qdca_: 2qdc A: [167538]
    automated match to d1jlna_
    complexed with gol, po4; mutant
45. Domain for 2qdm:
  - Domain d2qdma_: 2qdm A: [167547]
    automated match to d1jlna_
    complexed with po4; mutant
46. Domain for 2qdp:
  - Domain d2qdpa_: 2qdp A: [167548]
    automated match to d1jlna_
    complexed with po4; mutant
47. Domains for 2qep:
  1. Domain d2qepa_: 2qep A: [231203]
    automated match to d2i1yb_
    complexed with cl
  2. Domain d2qepb_: 2qep B: [231204]
    automated match to d2i1yb_
    complexed with cl
48. Domain for 2r0b:
  - Domain d2r0ba_: 2r0b A: [167901]
    automated match to d1m3ga_
    complexed with gol, so4
49. Domains for 2y96:
  1. Domain d2y96a_: 2y96 A: [244711]
    automated match to d1vhra_
    complexed with so4
  2. Domain d2y96b_: 2y96 B: [244712]
    automated match to d1vhra_
    complexed with so4
50. Domain for 3b7o:
  - Domain d3b7oa_: 3b7o A: [245362]
    automated match to d2pi7a_
    complexed with mlt
51. Domain for 3d42:
  - Domain d3d42a_: 3d42 A: [173668]
    automated match to d1jlna_
    complexed with gol, tar
52. Domain for 3d44:
  - Domain d3d44a_: 3d44 A: [173671]
    automated match to d1jlna_
    complexed with cl, gol
53. Domain for 3h2x:
  - Domain d3h2xa_: 3h2x A: [210809]
    automated match to d2h02b_
    complexed with po4
54. Domain for 3mow:
  - Domain d3mowa_: 3mow A: [232937]
    automated match to d2b49a_
    complexed with b2b
55. Domain for 3o4s:
  - Domain d3o4sa_: 3o4s A: [182794]
    automated match to d1jlna_
    complexed with gol, so4
56. Domain for 3o4t:
  - Domain d3o4ta_: 3o4t A: [182795]
    automated match to d1jlna_
    complexed with gol, so4, tar
57. Domain for 3o4u:
  - Domain d3o4ua_: 3o4u A: [182796]
    automated match to d1jlna_
    complexed with gol, srt, tla
58. Domain for 3o5x:
  - Domain d3o5xa_: 3o5x A: [248121]
    automated match to d3mowa_
    complexed with jzg
59. Domain for 3ps5:
  - Domain d3ps5a3: 3ps5 A:216-529 [248639]
    Other proteins in same PDB: d3ps5a1, d3ps5a2
    automated match to d2shpa1
    complexed with so4
60. Domains for 3qcb:
  1. Domain d3qcba_: 3qcb A: [215149]
    automated match to d1yfoa_
    complexed with so4
  2. Domain d3qcbb_: 3qcb B: [215150]
    automated match to d1yfoa_
    complexed with so4
61. Domains for 3qcc:
  1. Domain d3qcca_: 3qcc A: [215151]
    automated match to d1yfoa_
    complexed with vo4
  2. Domain d3qccb_: 3qcc B: [215152]
    automated match to d1yfoa_
    complexed with vo4
62. Domain for 3qcd:
  - Domain d3qcda_: 3qcd A: [215153]
    automated match to d1yfoa_
    complexed with acy, vo4
63. Domains for 3qce:
  1. Domain d3qcea_: 3qce A: [215154]
    automated match to d1yfoa_
    complexed with nxy, so4
  2. Domain d3qceb_: 3qce B: [215155]
    automated match to d1yfoa_
    complexed with nxy, so4
64. Domains for 3qcf:
  1. Domain d3qcfa_: 3qcf A: [215156]
    automated match to d1yfoa_
    complexed with nxy, so4
  2. Domain d3qcfb_: 3qcf B: [215157]
    automated match to d1yfoa_
    complexed with nxy, so4
65. Domain for 3qcg:
  - Domain d3qcga_: 3qcg A: [215158]
    automated match to d1yfoa_
    complexed with acy, nx1
66. Domain for 3qch:
  - Domain d3qcha_: 3qch A: [215159]
    automated match to d1yfoa_
    complexed with nx2
67. Domain for 3qci:
  - Domain d3qcia_: 3qci A: [215160]
    automated match to d1yfoa_
    complexed with nx3
68. Domain for 3qcj:
  - Domain d3qcja_: 3qcj A: [215161]
    automated match to d1yfoa_
    complexed with nx4
69. Domain for 3qck:
  - Domain d3qcka_: 3qck A: [215162]
    automated match to d1yfoa_
    complexed with nx5
70. Domain for 3qcl:
  - Domain d3qcla_: 3qcl A: [215163]
    automated match to d1yfoa_
    complexed with nxv
71. Domains for 3qcm:
  1. Domain d3qcma_: 3qcm A: [215164]
    automated match to d1yfoa_
    complexed with mes, nxw
  2. Domain d3qcmb_: 3qcm B: [215165]
    automated match to d1yfoa_
    complexed with mes, nxw
72. Domain for 3qcn:
  - Domain d3qcna_: 3qcn A: [215166]
    automated match to d1yfoa_
73. Domain for 3s4e:
  - Domain d3s4ea_: 3s4e A: [197132]
    automated match to d1m3ga_
    complexed with po4, so4
74. Domain for 3zm0:
  - Domain d3zm0a_: 3zm0 A: [256523]
    automated match to d3b7oa_
75. Domain for 3zm3:
  - Domain d3zm3a_: 3zm3 A: [256524]
    automated match to d3b7oa_
76. Domain for 4ikc:
  - Domain d4ikca_: 4ikc A: [234877]
    automated match to d1rpma_
    complexed with cl, so4
77. Domains for 4j51:
  1. Domain d4j51a_: 4j51 A: [240281]
    automated match to d4j51b_
    complexed with n75
  2. Domain d4j51b_: 4j51 B: [234925]
    automated match to d3h2xa_
    complexed with n75
78. Domains for 4jmk:
  1. Domain d4jmka_: 4jmk A: [237170]
    automated match to d3lj8a_
    complexed with so4
  2. Domain d4jmkb_: 4jmk B: [237171]
    automated match to d3lj8a_
    complexed with so4
79. Domains for 4nwf:
  1. Domain d4nwfa3: 4nwf A:219-533 [261536]
    Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
    automated match to d2b3oa3
    complexed with edo, gol; mutant
  2. Domain d4nwfb3: 4nwf B:219-533 [261533]
    Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
    automated match to d2b3oa3
    complexed with edo, gol; mutant
80. Domain for 4nwg:
  - Domain d4nwga3: 4nwg A:219-534 [261535]
    Other proteins in same PDB: d4nwga1, d4nwga2
    automated match to d2b3oa3
    complexed with edo, peg, so4; mutant
81. Domain for 4ohd:
  - Domain d4ohda3: 4ohd A:219-527 [259876]
    Other proteins in same PDB: d4ohda1, d4ohda2
    automated match to d2b3oa3
    mutant
82. Domain for 4ohe:
  - Domain d4ohea3: 4ohe A:219-528 [259873]
    Other proteins in same PDB: d4ohea1, d4ohea2
    automated match to d2b3oa3
    mutant
83. Domain for 4ohh:
  - Domain d4ohha3: 4ohh A:219-528 [259868]
    Other proteins in same PDB: d4ohha1, d4ohha2
    automated match to d2b3oa3
    mutant
84. Domain for 4ohi:
  - Domain d4ohia3: 4ohi A:219-528 [259870]
    Other proteins in same PDB: d4ohia1, d4ohia2
    automated match to d2b3oa3
    mutant
85. Domain for 4ohl:
  - Domain d4ohla3: 4ohl A:219-526 [259864]
    Other proteins in same PDB: d4ohla1, d4ohla2
    automated match to d2b3oa3
    mutant
86. Domains for 4qun:
  1. Domain d4quna_: 4qun A: [261551]
    automated match to d2cfva_
    complexed with gol, po4; mutant
  2. Domain d4qunb_: 4qun B: [261552]
    automated match to d2cfva_
    complexed with gol, po4; mutant
Mouse (Mus musculus) [TaxId:10090] [193198] (1 PDB entry)
- Domain for 2hcm:
  - Domain d2hcma_: 2hcm A: [193199]
    automated match to d2nt2a_
    complexed with gol, na, wo4, zn
Norway rat (Rattus norvegicus) [TaxId:10116] [225183] (2 PDB entries)
1. Domains for 2nv5:
  1. Domain d2nv5a_: 2nv5 A: [205182]
    automated match to d2ooqb_
  2. Domain d2nv5b_: 2nv5 B: [205183]
    automated match to d2ooqb_
  3. Domain d2nv5c_: 2nv5 C: [205184]
    automated match to d2ooqb_
2. Domain for 3i36:
  - Domain d3i36a_: 3i36 A: [246648]
    automated match to d2cnia_
    complexed with cl
Trypanosome (Trypanosoma brucei) [TaxId:5691] [255955] (1 PDB entry)
- Domains for 3m4u:
  1. Domain d3m4ua_: 3m4u A: [247608]
    automated match to d2h4vb_
    complexed with po4
  2. Domain d3m4ub_: 3m4u B: [247609]
    automated match to d2h4vb_
    complexed with po4

More info for Protein automated matches from c.45.1.0: automated matches

Timeline for Protein automated matches from c.45.1.0: automated matches:

Protein automated matches from c.45.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.45.1.0: automated matches appears in SCOPe 2.03
Protein automated matches from c.45.1.0: automated matches appears in SCOPe 2.05
Protein automated matches from c.45.1.0: automated matches appears in the current release, SCOPe 2.08