Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2116263Fold c.45: (Phosphotyrosine protein) phosphatases II [52798] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423
  4. 2116264Superfamily c.45.1: (Phosphotyrosine protein) phosphatases II [52799] (6 families) (S)
    share with the family I the common active site structure with a circularly permuted topology
  5. 2116650Family c.45.1.0: automated matches [191381] (1 protein)
    not a true family
  6. 2116651Protein automated matches [190475] (8 species)
    not a true protein

Species:

  1. 2116652Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [267784] (1 PDB entry)
  2. 2116655Chicken (Gallus gallus) [TaxId:9031] [193897] (1 PDB entry)
  3. 2116658Fruit fly (Drosophila melanogaster) [TaxId:7227] [226240] (2 PDB entries)
    1. Domains for 3s3e:
      1. 2116659Domain d3s3ea1: 3s3e A:24-305 [216190]
        Other proteins in same PDB: d3s3ea2, d3s3eb2
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
      2. 2116660Domain d3s3eb1: 3s3e B:24-305 [216191]
        Other proteins in same PDB: d3s3ea2, d3s3eb2
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
    2. Domains for 3s3f:
      1. 2116661Domain d3s3fa1: 3s3f A:24-305 [216192]
        Other proteins in same PDB: d3s3fa2, d3s3fb2
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
      2. 2116662Domain d3s3fb1: 3s3f B:24-305 [216193]
        Other proteins in same PDB: d3s3fa2, d3s3fb2
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
  4. 2116663Human (Homo sapiens) [TaxId:9606] [187400] (116 PDB entries)
    1. Domain for 1wrm:
    2. Domains for 1yz4:
      1. 2116769Domain d1yz4a1: 1yz4 A:1-156 [162339]
        Other proteins in same PDB: d1yz4a2
        automated match to d1m3ga_
        complexed with bog, so4
      2. 2116770Domain d1yz4b_: 1yz4 B: [162340]
        Other proteins in same PDB: d1yz4a2
        automated match to d1m3ga_
        complexed with bog, so4
    3. Domain for 1zc0:
    4. Domain for 1zep:
    5. Domains for 1zzw:
      1. 2116674Domain d1zzwa_: 1zzw A: [162637]
        automated match to d1mkpa_
        complexed with edo, so4
      2. 2116675Domain d1zzwb_: 1zzw B: [162638]
        automated match to d1mkpa_
        complexed with edo, so4
    6. Domain for 2a8b:
    7. Domains for 2ahs:
      1. 2116708Domain d2ahsa_: 2ahs A: [162814]
        automated match to d1rpma_
        complexed with cl, edo, na
      2. 2116709Domain d2ahsb_: 2ahs B: [162815]
        automated match to d1rpma_
        complexed with cl, edo, na
    8. Domain for 2b3o:
    9. Domain for 2b49:
    10. Domain for 2bij:
    11. Domain for 2bv5:
    12. Domain for 2bzl:
    13. Domain for 2c7s:
    14. Domain for 2cfv:
    15. Domain for 2cjz:
    16. Domain for 2esb:
    17. Domains for 2g59:
      1. 2116736Domain d2g59a1: 2g59 A:3-289 [197935]
        Other proteins in same PDB: d2g59a2, d2g59a3, d2g59b2, d2g59b3
        automated match to d2g59b_
        complexed with po4
      2. 2116737Domain d2g59b1: 2g59 B:3-289 [193826]
        Other proteins in same PDB: d2g59a2, d2g59a3, d2g59b2, d2g59b3
        automated match to d2hc1a_
        complexed with po4
    18. Domains for 2g6z:
      1. 2116796Domain d2g6za1: 2g6z A:178-320 [241904]
        Other proteins in same PDB: d2g6za2, d2g6zc2
        automated match to d3ezza_
        complexed with so4
      2. 2116797Domain d2g6zb_: 2g6z B: [241905]
        Other proteins in same PDB: d2g6za2, d2g6zc2
        automated match to d3ezza_
        complexed with so4
      3. 2116798Domain d2g6zc1: 2g6z C:178-319 [241906]
        Other proteins in same PDB: d2g6za2, d2g6zc2
        automated match to d3ezza_
        complexed with so4
    19. Domains for 2gjt:
      1. 2116724Domain d2gjta1: 2gjt A:916-1208 [193823]
        Other proteins in same PDB: d2gjta2, d2gjtb2
        automated match to d2hc1a_
        complexed with cl
      2. 2116725Domain d2gjtb1: 2gjt B:916-1201 [197957]
        Other proteins in same PDB: d2gjta2, d2gjtb2
        automated match to d2gjta_
        complexed with cl
    20. Domain for 2gp0:
    21. Domains for 2gwo:
      1. 2116764Domain d2gwoa_: 2gwo A: [264293]
        automated match to d2y96a_
      2. 2116765Domain d2gwob_: 2gwo B: [264294]
        automated match to d2y96a_
      3. 2116766Domain d2gwoc_: 2gwo C: [264295]
        automated match to d2y96a_
      4. 2116767Domain d2gwod_: 2gwo D: [264296]
        automated match to d2y96a_
    22. Domains for 2h02:
      1. 2116755Domain d2h02a_: 2h02 A: [197994]
        automated match to d2h04a_
        complexed with 2un
      2. 2116756Domain d2h02b_: 2h02 B: [193819]
        automated match to d2hc1a_
        complexed with 2un
    23. Domain for 2h03:
    24. Domain for 2h04:
    25. Domains for 2h4v:
      1. 2116668Domain d2h4va1: 2h4v A:831-1122 [230759]
        Other proteins in same PDB: d2h4va2, d2h4vb2
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
      2. 2116669Domain d2h4vb1: 2h4v B:831-1122 [230760]
        Other proteins in same PDB: d2h4va2, d2h4vb2
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
    26. Domain for 2hc1:
    27. Domain for 2hc2:
    28. Domain for 2hvl:
    29. Domains for 2hy3:
      1. 2116790Domain d2hy3a_: 2hy3 A: [204656]
        automated match to d1yfoa_
        complexed with vo4
      2. 2116791Domain d2hy3b_: 2hy3 B: [204657]
        automated match to d1yfoa_
        complexed with vo4
    30. Domains for 2i1y:
      1. 2116750Domain d2i1ya_: 2i1y A: [204684]
        automated match to d1oesa_
        complexed with gol
      2. 2116751Domain d2i1yb_: 2i1y B: [204685]
        automated match to d1oesa_
        complexed with gol
    31. Domains for 2i3r:
      1. 2116706Domain d2i3ra_: 2i3r A: [204695]
        automated match to d2h02b_
        complexed with cl
      2. 2116707Domain d2i3rb_: 2i3r B: [204696]
        automated match to d2h02b_
        complexed with cl
    32. Domain for 2i3u:
    33. Domains for 2i4e:
      1. 2116691Domain d2i4ea_: 2i4e A: [204704]
        automated match to d2h04a_
        complexed with vo4
      2. 2116692Domain d2i4eb_: 2i4e B: [204705]
        automated match to d2h04a_
        complexed with vo4
    34. Domain for 2i4g:
    35. Domain for 2i4h:
    36. Domains for 2i5x:
      1. 2116684Domain d2i5xa_: 2i5x A: [204716]
        automated match to d2h04a_
        complexed with cl, mg, ua5
      2. 2116685Domain d2i5xb_: 2i5x B: [204717]
        automated match to d2h04a_
        complexed with cl, mg, ua5
    37. Domain for 2i75:
    38. Domains for 2nlk:
      1. 2116780Domain d2nlka1: 2nlk A:827-1160 [264417]
        automated match to d1lara1
      2. 2116781Domain d2nlka2: 2nlk A:1168-1412 [264418]
        automated match to d1lara2
    39. Domains for 2nt2:
      1. 2116716Domain d2nt2a_: 2nt2 A: [166343]
        automated match to d1m3ga_
        complexed with so4
      2. 2116717Domain d2nt2b_: 2nt2 B: [166344]
        automated match to d1m3ga_
        complexed with so4
      3. 2116718Domain d2nt2c_: 2nt2 C: [166345]
        automated match to d1m3ga_
        complexed with so4
    40. Domain for 2nz6:
    41. Domain for 2oc3:
    42. Domain for 2oud:
    43. Domains for 2p6x:
      1. 2116698Domain d2p6xa1: 2p6x A:1-302 [231137]
        Other proteins in same PDB: d2p6xa2
        automated match to d2p6xb_
        complexed with cl, edo
      2. 2116699Domain d2p6xb_: 2p6x B: [205453]
        Other proteins in same PDB: d2p6xa2
        automated match to d2h04a_
        complexed with cl, edo
    44. Domain for 2pbn:
    45. Domains for 2pq5:
      1. 2116775Domain d2pq5a_: 2pq5 A: [264446]
        automated match to d2y96a_
      2. 2116776Domain d2pq5b_: 2pq5 B: [264447]
        automated match to d2y96a_
      3. 2116777Domain d2pq5c_: 2pq5 C: [264448]
        automated match to d2y96a_
      4. 2116778Domain d2pq5d_: 2pq5 D: [264449]
        automated match to d2y96a_
    46. Domains for 2qcj:
      1. 2116807Domain d2qcja_: 2qcj A: [243530]
        automated match to d3s3ea_
      2. 2116808Domain d2qcjb_: 2qcj B: [243531]
        automated match to d3s3ea_
    47. Domains for 2qct:
      1. 2116803Domain d2qcta_: 2qct A: [231198]
        automated match to d3h2xa_
        complexed with 561, edo
      2. 2116804Domain d2qctb_: 2qct B: [231197]
        automated match to d3h2xa_
        complexed with 561, edo
    48. Domain for 2qdc:
    49. Domain for 2qdm:
    50. Domain for 2qdp:
    51. Domains for 2qep:
      1. 2116784Domain d2qepa1: 2qep A:724-1010 [231203]
        Other proteins in same PDB: d2qepa2, d2qepb2
        automated match to d2i1yb_
        complexed with cl
      2. 2116785Domain d2qepb1: 2qep B:724-1010 [231204]
        Other proteins in same PDB: d2qepa2, d2qepb2
        automated match to d2i1yb_
        complexed with cl
    52. Domain for 2r0b:
    53. Domains for 2wgp:
      1. 2116695Domain d2wgpa_: 2wgp A: [264533]
        automated match to d2esba_
        complexed with po4
      2. 2116696Domain d2wgpb_: 2wgp B: [264534]
        automated match to d2esba_
        complexed with po4
    54. Domains for 2y96:
      1. 2116758Domain d2y96a_: 2y96 A: [244711]
        automated match to d1vhra_
        complexed with so4
      2. 2116759Domain d2y96b_: 2y96 B: [244712]
        automated match to d1vhra_
        complexed with so4
    55. Domain for 3b7o:
    56. Domain for 3d42:
    57. Domain for 3d44:
    58. Domain for 3h2x:
    59. Domain for 3jrl:
    60. Domain for 3mow:
    61. Domain for 3o4s:
    62. Domain for 3o4t:
    63. Domain for 3o4u:
    64. Domain for 3o5x:
    65. Domain for 3ps5:
    66. Domains for 3qcb:
      1. 2116752Domain d3qcba_: 3qcb A: [215149]
        automated match to d1yfoa_
        complexed with so4
      2. 2116753Domain d3qcbb_: 3qcb B: [215150]
        automated match to d1yfoa_
        complexed with so4
    67. Domains for 3qcc:
      1. 2116739Domain d3qcca_: 3qcc A: [215151]
        automated match to d1yfoa_
        complexed with vo4
      2. 2116740Domain d3qccb_: 3qcc B: [215152]
        automated match to d1yfoa_
        complexed with vo4
    68. Domain for 3qcd:
    69. Domains for 3qce:
      1. 2116743Domain d3qcea_: 3qce A: [215154]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 2116744Domain d3qceb_: 3qce B: [215155]
        automated match to d1yfoa_
        complexed with nxy, so4
    70. Domains for 3qcf:
      1. 2116786Domain d3qcfa_: 3qcf A: [215156]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 2116787Domain d3qcfb_: 3qcf B: [215157]
        automated match to d1yfoa_
        complexed with nxy, so4
    71. Domain for 3qcg:
    72. Domain for 3qch:
    73. Domain for 3qci:
    74. Domain for 3qcj:
    75. Domain for 3qck:
    76. Domain for 3qcl:
    77. Domains for 3qcm:
      1. 2116762Domain d3qcma_: 3qcm A: [215164]
        automated match to d1yfoa_
        complexed with mes, nxw
      2. 2116763Domain d3qcmb_: 3qcm B: [215165]
        automated match to d1yfoa_
        complexed with mes, nxw
    78. Domain for 3qcn:
    79. Domain for 3s4e:
    80. Domain for 3zm0:
    81. Domain for 3zm1:
    82. Domain for 3zm2:
    83. Domain for 3zm3:
    84. Domain for 4d3p:
    85. Domains for 4d3q:
      1. 2116727Domain d4d3qa_: 4d3q A: [278945]
        automated match to d3s4ea_
        complexed with so4
      2. 2116728Domain d4d3qb_: 4d3q B: [278946]
        automated match to d3s4ea_
        complexed with so4
    86. Domain for 4d3r:
    87. Domain for 4hrf:
    88. Domain for 4ikc:
    89. Domains for 4j51:
      1. 2116748Domain d4j51a_: 4j51 A: [240281]
        automated match to d4j51b_
        complexed with n75
      2. 2116749Domain d4j51b_: 4j51 B: [234925]
        automated match to d3h2xa_
        complexed with n75
    90. Domains for 4jmk:
      1. 2116733Domain d4jmka_: 4jmk A: [237170]
        Other proteins in same PDB: d4jmkb2
        automated match to d3lj8a_
        complexed with so4
      2. 2116734Domain d4jmkb1: 4jmk B:160-303 [237171]
        Other proteins in same PDB: d4jmkb2
        automated match to d3lj8a_
        complexed with so4
    91. Domains for 4nwf:
      1. 2116792Domain d4nwfa3: 4nwf A:219-533 [261536]
        Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
        automated match to d2b3oa3
        complexed with edo, gol; mutant
      2. 2116793Domain d4nwfb3: 4nwf B:219-533 [261533]
        Other proteins in same PDB: d4nwfa1, d4nwfa2, d4nwfb1, d4nwfb2
        automated match to d2b3oa3
        complexed with edo, gol; mutant
    92. Domains for 4nwg:
      1. 2116805Domain d4nwga3: 4nwg A:219-534 [261535]
        Other proteins in same PDB: d4nwga1, d4nwga2, d4nwgb1, d4nwgb2
        automated match to d2b3oa3
        complexed with edo, peg, so4; mutant
      2. 2116806Domain d4nwgb3: 4nwg B:219-533 [263233]
        Other proteins in same PDB: d4nwga1, d4nwga2, d4nwgb1, d4nwgb2
        automated match to d2b3oa3
        complexed with edo, peg, so4; mutant
    93. Domain for 4ohd:
    94. Domain for 4ohe:
    95. Domain for 4ohh:
    96. Domain for 4ohi:
    97. Domains for 4ohl:
      1. 2116788Domain d4ohla3: 4ohl A:219-526 [259864]
        Other proteins in same PDB: d4ohla1, d4ohla2, d4ohlb1, d4ohlb2
        automated match to d2b3oa3
        mutant
      2. 2116789Domain d4ohlb3: 4ohl B:219-526 [263290]
        Other proteins in same PDB: d4ohla1, d4ohla2, d4ohlb1, d4ohlb2
        automated match to d2b3oa3
        mutant
    98. Domains for 4qun:
      1. 2116722Domain d4quna1: 4qun A:628-908 [261551]
        Other proteins in same PDB: d4quna2, d4qunb2
        automated match to d2cfva_
        complexed with gol, po4; mutant
      2. 2116723Domain d4qunb1: 4qun B:628-908 [261552]
        Other proteins in same PDB: d4quna2, d4qunb2
        automated match to d2cfva_
        complexed with gol, po4; mutant
    99. Domain for 4rdd:
    100. Domains for 4ri4:
      1. 2116719Domain d4ri4a1: 4ri4 A:628-907 [269849]
        Other proteins in same PDB: d4ri4a2
        automated match to d2cfva_
        complexed with vo4; mutant
      2. 2116720Domain d4ri4b_: 4ri4 B: [269850]
        Other proteins in same PDB: d4ri4a2
        automated match to d2cfva_
        complexed with vo4; mutant
    101. Domains for 4ri5:
      1. 2116670Domain d4ri5a1: 4ri5 A:628-908 [269852]
        Other proteins in same PDB: d4ri5a2, d4ri5b2
        automated match to d2cfva_
        complexed with gol, vn4; mutant
      2. 2116671Domain d4ri5b1: 4ri5 B:628-908 [269851]
        Other proteins in same PDB: d4ri5a2, d4ri5b2
        automated match to d2cfva_
        complexed with gol, vn4; mutant
    102. Domain for 4woh:
    103. Domains for 4yr8:
      1. 2269081Domain d4yr8d_: 4yr8 D: [312387]
        Other proteins in same PDB: d4yr8a_, d4yr8c_, d4yr8e_, d4yr8f_
        automated match to d4jmka_
        complexed with cl
      2. 2269096Domain d4yr8b_: 4yr8 B: [312402]
        Other proteins in same PDB: d4yr8a_, d4yr8c_, d4yr8e_, d4yr8f_
        automated match to d4jmka_
        complexed with cl
      3. 2269173Domain d4yr8h_: 4yr8 H: [312479]
        Other proteins in same PDB: d4yr8a_, d4yr8c_, d4yr8e_, d4yr8f_
        automated match to d4jmka_
        complexed with cl
      4. 2269731Domain d4yr8g_: 4yr8 G: [313036]
        Other proteins in same PDB: d4yr8a_, d4yr8c_, d4yr8e_, d4yr8f_
        automated match to d4jmka_
        complexed with cl
    104. Domain for 5awx:
    105. Domain for 5h08:
    106. Domain for 5hde:
    107. Domains for 5j8r:
      1. 2273010Domain d5j8rc_: 5j8r C: [316311]
        automated match to d4j51a_
        mutant
      2. 2273014Domain d5j8rd_: 5j8r D: [316315]
        automated match to d4j51a_
        mutant
      3. 2273017Domain d5j8rb_: 5j8r B: [316318]
        automated match to d4j51a_
        mutant
      4. 2273026Domain d5j8ra_: 5j8r A: [316327]
        automated match to d4j51a_
        mutant
    108. Domain for 5ka0:
    109. Domain for 5ka1:
    110. Domain for 5kaa:
    111. Domain for 5kab:
    112. Domain for 5ovr:
    113. Domain for 5ovx:
    114. Domain for 5ow1:
    115. Domains for 5y15:
      1. 2298683Domain d5y15a_: 5y15 A: [341984]
        automated match to d2wgpb_
        complexed with po4
      2. 2298686Domain d5y15b_: 5y15 B: [341987]
        automated match to d2wgpb_
        complexed with po4
    116. Domains for 5y16:
      1. 2298709Domain d5y16a_: 5y16 A: [342010]
        automated match to d2wgpb_
        complexed with cl, po4
      2. 2298721Domain d5y16b_: 5y16 B: [342022]
        automated match to d2wgpb_
        complexed with cl, po4
  5. 2116809Mouse (Mus musculus) [TaxId:10090] [193198] (1 PDB entry)
  6. 2116811Norway rat (Rattus norvegicus) [TaxId:10116] [225183] (2 PDB entries)
    1. Domains for 2nv5:
      1. 2116813Domain d2nv5a_: 2nv5 A: [205182]
        automated match to d2ooqb_
      2. 2116814Domain d2nv5b_: 2nv5 B: [205183]
        automated match to d2ooqb_
      3. 2116815Domain d2nv5c_: 2nv5 C: [205184]
        automated match to d2ooqb_
    2. Domain for 3i36:
  7. 2116816Trypanosoma cruzi [TaxId:5693] [267919] (1 PDB entry)
  8. 2116819Trypanosome (Trypanosoma brucei) [TaxId:5691] [255955] (1 PDB entry)

More info for Protein automated matches from c.45.1.0: automated matches

Timeline for Protein automated matches from c.45.1.0: automated matches: