Species:

1. Corynebacterium glutamicum [TaxId:196627] [227854] (2 PDB entries)

   1. Domains for 4h0r:

      1. Domain d4h0ra_: 4h0r A: [227855] automated match to d4knza_

      2. Domain d4h0rb_: 4h0r B: [234588] automated match to d4h0ra_

   2. Domains for 4h0u:

      1. Domain d4h0ua_: 4h0u A: [234590] automated match to d4h0ra_ complexed with ump

      2. Domain d4h0ub_: 4h0u B: [234589] automated match to d4h0ra_ complexed with ump

      3. Domain d4h0uc_: 4h0u C: [234599] automated match to d4h0ra_ complexed with ump

      4. Domain d4h0ud_: 4h0u D: [227856] automated match to d4knza_ complexed with ump

2. Cryptosporidium hominis [TaxId:237895] [232024] (3 PDB entries)

   1. Domains for 2oip:

      1. Domain d2oipa2: 2oip A:181-521 [148785] Other proteins in same PDB: d2oipa1, d2oipb1, d2oipc1, d2oipd1, d2oipe1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

      2. Domain d2oipb2: 2oip B:181-521 [148787] Other proteins in same PDB: d2oipa1, d2oipb1, d2oipc1, d2oipd1, d2oipe1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

      3. Domain d2oipc2: 2oip C:186-521 [148789] Other proteins in same PDB: d2oipa1, d2oipb1, d2oipc1, d2oipd1, d2oipe1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

      4. Domain d2oipd2: 2oip D:181-521 [148791] Other proteins in same PDB: d2oipa1, d2oipb1, d2oipc1, d2oipd1, d2oipe1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

      5. Domain d2oipe2: 2oip E:181-521 [148793] Other proteins in same PDB: d2oipa1, d2oipb1, d2oipc1, d2oipd1, d2oipe1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

   2. Domains for 3dl5:

      1. Domain d3dl5b2: 3dl5 B:181-521 [232027] Other proteins in same PDB: d3dl5a1, d3dl5b1, d3dl5c1, d3dl5d1, d3dl5e1 automated match to d1qzfa2 complexed with cb3, dhf, ndp, ump; mutant

      2. Domain d3dl5c2: 3dl5 C:181-521 [232031] Other proteins in same PDB: d3dl5a1, d3dl5b1, d3dl5c1, d3dl5d1, d3dl5e1 automated match to d1qzfa2 complexed with cb3, dhf, ndp, ump; mutant

      3. Domain d3dl5d2: 3dl5 D:193-521 [232026] Other proteins in same PDB: d3dl5a1, d3dl5b1, d3dl5c1, d3dl5d1, d3dl5e1 automated match to d1qzfa2 complexed with cb3, dhf, ndp, ump; mutant

   3. Domains for 3hj3:

      1. Domain d3hj3a2: 3hj3 A:192-521 [232479] Other proteins in same PDB: d3hj3a1, d3hj3b1, d3hj3c1, d3hj3d1 automated match to d1qzfa2 complexed with cb3, mtx, ndp, ump; mutant

      2. Domain d3hj3b2: 3hj3 B:192-521 [236020] Other proteins in same PDB: d3hj3a1, d3hj3b1, d3hj3c1, d3hj3d1 automated match to d3hj3a2 complexed with cb3, mtx, ndp, ump; mutant

      3. Domain d3hj3c2: 3hj3 C:192-521 [236019] Other proteins in same PDB: d3hj3a1, d3hj3b1, d3hj3c1, d3hj3d1 automated match to d3hj3a2 complexed with cb3, mtx, ndp, ump; mutant

      4. Domain d3hj3d2: 3hj3 D:193-521 [236023] Other proteins in same PDB: d3hj3a1, d3hj3b1, d3hj3c1, d3hj3d1 automated match to d3hj3a2 complexed with cb3, mtx, ndp, ump; mutant

3. Elizabethkingia anophelis [TaxId:1338011] [339475] (1 PDB entry)

   • Domains for 6auj:

     1. Domain d6auja1: 6auj A:9-259 [339476] Other proteins in same PDB: d6auja2, d6aujb2 automated match to d4knza_ complexed with pge

     2. Domain d6aujb1: 6auj B:9-265 [339506] Other proteins in same PDB: d6auja2, d6aujb2 automated match to d4knza_ complexed with pge

     3. Domain d6aujc_: 6auj C: [339502] Other proteins in same PDB: d6auja2, d6aujb2 automated match to d4knza_ complexed with pge

4. Encephalitozoon cuniculi [TaxId:284813] [189107] (1 PDB entry)

   • Domain for 3kgb:

     • Domain d3kgba_: 3kgb A: [179351] automated match to d1hvya_ complexed with cl

5. Enterococcus faecalis [TaxId:1351] [194752] (3 PDB entries)

   1. Domains for 3uwl:

      1. Domain d3uwla_: 3uwl A: [194756] automated match to d1tsla_ complexed with edo, foz, so4

      2. Domain d3uwlb_: 3uwl B: [194753] automated match to d1tsla_ complexed with edo, foz, so4

      3. Domain d3uwlc_: 3uwl C: [194754] automated match to d1tsla_ complexed with edo, foz, so4

      4. Domain d3uwld_: 3uwl D: [194755] automated match to d1tsla_ complexed with edo, foz, so4

   2. Domains for 4o7u:

      1. Domain d4o7ua_: 4o7u A: [268461] automated match to d3uwlb_ complexed with edo, so4, ss7, thf

      2. Domain d4o7ub_: 4o7u B: [268460] automated match to d3uwlb_ complexed with edo, so4, ss7, thf

      3. Domain d4o7uc_: 4o7u C: [268468] automated match to d3uwlb_ complexed with edo, so4, ss7, thf

      4. Domain d4o7ud_: 4o7u D: [268470] automated match to d3uwlb_ complexed with edo, so4, ss7, thf

   3. Domains for 5j7w:

      1. Domain d5j7wa_: 5j7w A: [323353] automated match to d3uwlb_ complexed with mtx, so4

      2. Domain d5j7wb_: 5j7w B: [323374] automated match to d3uwlb_ complexed with mtx, so4

      3. Domain d5j7wc_: 5j7w C: [323410] automated match to d3uwlb_ complexed with mtx, so4

      4. Domain d5j7wd_: 5j7w D: [323368] automated match to d3uwlb_ complexed with mtx, so4

6. Fungus (Filobasidiella neoformans) [TaxId:5207] [187389] (1 PDB entry)

   • Domains for 2aaz:

     1. Domain d2aaza_: 2aaz A: [162731] automated match to d1ci7a_ complexed with cb3, ump

     2. Domain d2aazb_: 2aaz B: [162732] automated match to d1ci7a_ complexed with cb3, ump

     3. Domain d2aazc_: 2aaz C: [162733] automated match to d1ci7a_ complexed with cb3, ump

     4. Domain d2aazd_: 2aaz D: [162734] automated match to d1ci7a_ complexed with cb3, ump

     5. Domain d2aaze_: 2aaz E: [162735] automated match to d1ci7a_ complexed with cb3, ump

     6. Domain d2aazf_: 2aaz F: [162736] automated match to d1ci7a_ complexed with cb3, ump

     7. Domain d2aazg_: 2aaz G: [162737] automated match to d1ci7a_ complexed with cb3, ump

     8. Domain d2aazh_: 2aaz H: [162738] automated match to d1ci7a_ complexed with cb3, ump

     9. Domain d2aazi_: 2aaz I: [162739] automated match to d1ci7a_ complexed with cb3, ump

     10. Domain d2aazj_: 2aaz J: [162740] automated match to d1ci7a_ complexed with cb3, ump

     11. Domain d2aazk_: 2aaz K: [162741] automated match to d1ci7a_ complexed with cb3, ump

     12. Domain d2aazl_: 2aaz L: [162742] automated match to d1ci7a_ complexed with cb3, ump

     13. Domain d2aazm_: 2aaz M: [162743] automated match to d1ci7a_ complexed with cb3, ump

     14. Domain d2aazn_: 2aaz N: [162744] automated match to d1ci7a_ complexed with cb3, ump

     15. Domain d2aazo_: 2aaz O: [162745] automated match to d1ci7a_ complexed with cb3, ump

     16. Domain d2aazp_: 2aaz P: [162746] automated match to d1ci7a_ complexed with cb3, ump

7. Human (Homo sapiens) [TaxId:9606] [189245] (10 PDB entries)

   1. Domain for 3ebu:

      • Domain d3ebua_: 3ebu A: [340422] automated match to d4eb4a_ complexed with edo, so4

   2. Domain for 3ed7:

      • Domain d3ed7a_: 3ed7 A: [174856] automated match to d1hvya_ complexed with so4

   3. Domain for 3edw:

      • Domain d3edwx_: 3edw X: [340421] automated match to d4eb4a_ complexed with so4

   4. Domains for 3gg5:

      1. Domain d3gg5a_: 3gg5 A: [210523] automated match to d2aaza_ complexed with po4, so4

      2. Domain d3gg5b_: 3gg5 B: [210524] automated match to d2aaza_ complexed with po4, so4

      3. Domain d3gg5c_: 3gg5 C: [210525] automated match to d2aaza_ complexed with po4, so4

      4. Domain d3gg5d_: 3gg5 D: [210526] automated match to d2aaza_ complexed with po4, so4

   5. Domain for 3gh0:

      • Domain d3gh0a1: 3gh0 A:26-309 [210533] automated match to d2aaza_ complexed with so4

   6. Domain for 3gh2:

      • Domain d3gh2x_: 3gh2 X: [210534] automated match to d2aaza_ complexed with so4

   7. Domain for 4g2o:

      • Domain d4g2ox_: 4g2o X: [221669] automated match to d2aaza_ complexed with so4, tiy

   8. Domains for 4o1u:

      1. Domain d4o1ua_: 4o1u A: [268442] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

      2. Domain d4o1ub_: 4o1u B: [268435] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

   9. Domains for 4o1x:

      1. Domain d4o1xa_: 4o1x A: [268445] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

      2. Domain d4o1xb_: 4o1x B: [268447] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

      3. Domain d4o1xc_: 4o1x C: [268446] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

      4. Domain d4o1xd_: 4o1x D: [268448] automated match to d4eb4a_ complexed with cl, edo, so4; mutant

   10. Domains for 4up1:

       1. Domain d4up1a_: 4up1 A: [274330] automated match to d4eb4a_ complexed with so4

       2. Domain d4up1b_: 4up1 B: [274331] automated match to d4eb4a_ complexed with so4

       3. Domain d4up1c_: 4up1 C: [274337] automated match to d4eb4a_ complexed with so4

       4. Domain d4up1d_: 4up1 D: [274332] automated match to d4eb4a_ complexed with so4

8. Human herpesvirus 8 [TaxId:37296] [328471] (3 PDB entries)

   1. Domains for 5h38:

      1. Domain d5h38a_: 5h38 A: [328531] automated match to d1hvya_ complexed with po4

      2. Domain d5h38b_: 5h38 B: [328641] automated match to d1hvya_ complexed with po4

   2. Domains for 5h39:

      1. Domain d5h39a_: 5h39 A: [328472] automated match to d1hvya_ complexed with ump

      2. Domain d5h39b_: 5h39 B: [328530] automated match to d1hvya_ complexed with ump

   3. Domains for 5h3a:

      1. Domain d5h3aa_: 5h3a A: [328624] automated match to d1hvya_ complexed with d16, ump

      2. Domain d5h3ab_: 5h3a B: [328493] automated match to d1hvya_ complexed with d16, ump

9. Malaria parasite (Plasmodium falciparum) [TaxId:5833] [188759] (2 PDB entries)

   1. Domains for 3dg8:

      1. Domain d3dg8c_: 3dg8 C: [173918] Other proteins in same PDB: d3dg8a_, d3dg8b_ automated match to d1j3ic_ complexed with ndp, rj6, ump; mutant

      2. Domain d3dg8d_: 3dg8 D: [173919] Other proteins in same PDB: d3dg8a_, d3dg8b_ automated match to d1j3ic_ complexed with ndp, rj6, ump; mutant

   2. Domains for 3dga:

      1. Domain d3dgac_: 3dga C: [173920] Other proteins in same PDB: d3dgaa_, d3dgab_ automated match to d1j3ic_ complexed with ndp, rj1, ump

      2. Domain d3dgad_: 3dga D: [173921] Other proteins in same PDB: d3dgaa_, d3dgab_ automated match to d1j3ic_ complexed with ndp, rj1, ump

10. Mouse (Mus musculus) [TaxId:10090] [225826] (7 PDB entries)

    1. Domains for 3ihh:

       1. Domain d3ihha_: 3ihh A: [305555] automated match to d4eb4a_ complexed with ump

       2. Domain d3ihhb_: 3ihh B: [305556] automated match to d4eb4a_ complexed with ump

       3. Domain d3ihhc_: 3ihh C: [305557] automated match to d4eb4a_ complexed with ump

       4. Domain d3ihhd_: 3ihh D: [305558] automated match to d4eb4a_ complexed with ump

       5. Domain d3ihhe_: 3ihh E: [305559] automated match to d4eb4a_ complexed with ump

       6. Domain d3ihhf_: 3ihh F: [305560] automated match to d4eb4a_ complexed with ump

    2. Domains for 3ihi:

       1. Domain d3ihia_: 3ihi A: [211690] automated match to d3ed7a_ complexed with so4

       2. Domain d3ihib_: 3ihi B: [211691] automated match to d3ed7a_ complexed with so4

    3. Domains for 4e5o:

       1. Domain d4e5oa_: 4e5o A: [220314] automated match to d3ed7a_ complexed with bu1, ump

       2. Domain d4e5ob_: 4e5o B: [220315] automated match to d3ed7a_ complexed with bu1, ump

       3. Domain d4e5oc_: 4e5o C: [220316] automated match to d3ed7a_ complexed with bu1, ump

       4. Domain d4e5od_: 4e5o D: [220317] automated match to d3ed7a_ complexed with bu1, ump

       5. Domain d4e5oe_: 4e5o E: [220318] automated match to d3ed7a_ complexed with bu1, ump

       6. Domain d4e5of_: 4e5o F: [220319] automated match to d3ed7a_ complexed with bu1, ump

    4. Domains for 4eb4:

       1. Domain d4eb4a_: 4eb4 A: [220395] automated match to d3ed7a_ complexed with d16, dtt, gol, mes, so4, ump

       2. Domain d4eb4b_: 4eb4 B: [220396] automated match to d3ed7a_ complexed with d16, dtt, gol, mes, so4, ump

       3. Domain d4eb4c_: 4eb4 C: [220397] automated match to d3ed7a_ complexed with d16, dtt, gol, mes, so4, ump

       4. Domain d4eb4d_: 4eb4 D: [220398] automated match to d3ed7a_ complexed with d16, dtt, gol, mes, so4, ump

    5. Domains for 4ein:

       1. Domain d4eina_: 4ein A: [220562] automated match to d3ed7a_ complexed with gol, noh

       2. Domain d4einb_: 4ein B: [220563] automated match to d3ed7a_ complexed with gol, noh

    6. Domain for 4ez8:

       • Domain d4ez8a_: 4ez8 A: [220908] automated match to d3ed7a_ complexed with dhf, gol, noh

    7. Domains for 5fct:

       1. Domain d5fcta_: 5fct A: [324421] automated match to d4eb4a_ complexed with c2f, ufp

       2. Domain d5fctb_: 5fct B: [324397] automated match to d4eb4a_ complexed with c2f, ufp

11. Mycobacterium tuberculosis [TaxId:1773] [189990] (2 PDB entries)

    1. Domains for 3qj7:

       1. Domain d3qj7a_: 3qj7 A: [184413] Other proteins in same PDB: d3qj7d2 automated match to d1aiqa_ complexed with spm, ump

       2. Domain d3qj7b_: 3qj7 B: [184414] Other proteins in same PDB: d3qj7d2 automated match to d1aiqa_ complexed with spm, ump

       3. Domain d3qj7c_: 3qj7 C: [184415] Other proteins in same PDB: d3qj7d2 automated match to d1aiqa_ complexed with spm, ump

       4. Domain d3qj7d1: 3qj7 D:1-263 [184416] Other proteins in same PDB: d3qj7d2 automated match to d1aiqa_ complexed with spm, ump

    2. Domains for 4foa:

       1. Domain d4foaa1: 4foa A:1-260 [221388] Other proteins in same PDB: d4foaa2 automated match to d3qj7d_ complexed with ufp

       2. Domain d4foab_: 4foa B: [221389] Other proteins in same PDB: d4foaa2 automated match to d3qj7c_ complexed with ufp

       3. Domain d4foac_: 4foa C: [221390] Other proteins in same PDB: d4foaa2 automated match to d3qj7a_ complexed with ufp

       4. Domain d4foad_: 4foa D: [221391] Other proteins in same PDB: d4foaa2 automated match to d3qj7c_ complexed with ufp

12. Mycobacterium tuberculosis [TaxId:83332] [224938] (3 PDB entries)

    1. Domains for 4fog:

       1. Domain d4foga_: 4fog A: [221401] automated match to d1jg0a_ complexed with c2f, ufp

       2. Domain d4fogb_: 4fog B: [221402] automated match to d1jg0a_ complexed with c2f, ufp

       3. Domain d4fogc_: 4fog C: [221403] automated match to d1jg0a_ complexed with c2f, ufp

       4. Domain d4fogd_: 4fog D: [221404] automated match to d1jg0a_ complexed with c2f, ufp

    2. Domains for 4fox:

       1. Domain d4foxa_: 4fox A: [221413] automated match to d1jg0a_ complexed with d16, ump

       2. Domain d4foxb_: 4fox B: [221414] automated match to d1jg0a_ complexed with d16, ump

       3. Domain d4foxc_: 4fox C: [221415] automated match to d1jg0a_ complexed with d16, ump

       4. Domain d4foxd_: 4fox D: [221416] automated match to d1jg0a_ complexed with d16, ump

       5. Domain d4foxe_: 4fox E: [221417] automated match to d1jg0a_ complexed with d16, ump

       6. Domain d4foxf_: 4fox F: [221418] automated match to d1jg0a_ complexed with d16, ump

       7. Domain d4foxg_: 4fox G: [221419] automated match to d1jg0a_ complexed with d16, ump

       8. Domain d4foxh_: 4fox H: [221420] automated match to d1jg0a_ complexed with d16, ump

    3. Domains for 4fqs:

       1. Domain d4fqsa_: 4fqs A: [221464] automated match to d1jg0a_ complexed with lya, ump

       2. Domain d4fqsb_: 4fqs B: [221465] automated match to d1jg0a_ complexed with lya, ump

13. Staphylococcus aureus [TaxId:158878] [195805] (1 PDB entry)

    • Domains for 4dq1:

      1. Domain d4dq1a_: 4dq1 A: [195807] automated match to d1tsla_ complexed with ump

      2. Domain d4dq1b_: 4dq1 B: [195806] automated match to d1tsla_ complexed with ump

14. Trichinella spiralis [TaxId:6334] [226731] (2 PDB entries)

    1. Domains for 5by6:

       1. Domain d5by6a_: 5by6 A: [273889] automated match to d4irra_ complexed with dtt, gol, ump

       2. Domain d5by6b_: 5by6 B: [273887] automated match to d4irra_ complexed with dtt, gol, ump

       3. Domain d5by6c_: 5by6 C: [273886] automated match to d4irra_ complexed with dtt, gol, ump

       4. Domain d5by6d_: 5by6 D: [273888] automated match to d4irra_ complexed with dtt, gol, ump

    2. Domains for 5m4z:

       1. Domain d5m4za_: 5m4z A: [343053] automated match to d4irra_ complexed with 7k8, gol

       2. Domain d5m4zb_: 5m4z B: [343049] automated match to d4irra_ complexed with 7k8, gol

15. Varicella-zoster virus (strain oka vaccine) [TaxId:341980] [311478] (3 PDB entries)

    1. Domains for 4xsc:

       1. Domain d4xsca_: 4xsc A: [310053] automated match to d4ez8a_ complexed with 1pe, bvp

       2. Domain d4xscb_: 4xsc B: [310054] automated match to d4ez8a_ complexed with 1pe, bvp

       3. Domain d4xscc_: 4xsc C: [310055] automated match to d4ez8a_ complexed with 1pe, bvp

       4. Domain d4xscd_: 4xsc D: [310056] automated match to d4ez8a_ complexed with 1pe, bvp

    2. Domains for 4xsd:

       1. Domain d4xsda_: 4xsd A: [310057] automated match to d4ez8a_ complexed with ump

       2. Domain d4xsdb_: 4xsd B: [310058] automated match to d4ez8a_ complexed with ump

       3. Domain d4xsdc_: 4xsd C: [310059] automated match to d4ez8a_ complexed with ump

       4. Domain d4xsdd_: 4xsd D: [310060] automated match to d4ez8a_ complexed with ump

    3. Domains for 4xse:

       1. Domain d4xsea_: 4xse A: [310061] automated match to d4ez8a_ complexed with po4

       2. Domain d4xseb_: 4xse B: [310062] automated match to d4ez8a_ complexed with po4

       3. Domain d4xsec_: 4xse C: [310063] automated match to d4ez8a_ complexed with po4

       4. Domain d4xsed_: 4xse D: [310064] automated match to d4ez8a_ complexed with po4

More info for Protein automated matches from d.117.1.1: Thymidylate synthase/dCMP hydroxymethylase

Timeline for Protein automated matches from d.117.1.1: Thymidylate synthase/dCMP hydroxymethylase:

• Protein automated matches from d.117.1.1: Thymidylate synthase/dCMP hydroxymethylase first appeared in SCOPe 2.01
  
• Protein automated matches from d.117.1.1: Thymidylate synthase/dCMP hydroxymethylase appears in SCOPe 2.06