Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2634415Class g: Small proteins [56992] (98 folds)
  3. 2640292Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
    alpha+beta metal(zinc)-bound fold
  4. 2640293Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (19 families) (S)
  5. 2640848Family g.39.1.0: automated matches [191378] (1 protein)
    not a true family
  6. 2640849Protein automated matches [190463] (9 species)
    not a true protein

Species:

  1. 2640850Bacillus anthracis [TaxId:260799] [225213] (1 PDB entry)
  2. 2640852Bacillus cereus [TaxId:1396] [225215] (1 PDB entry)
  3. 2640854Emericella nidulans [TaxId:162425] [225494] (3 PDB entries)
    1. Domains for 2vus:
      1. 2640863Domain d2vusi_: 2vus I: [153565]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      2. 2640864Domain d2vusj_: 2vus J: [153566]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      3. 2640865Domain d2vusk_: 2vus K: [153567]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      4. 2640866Domain d2vusl_: 2vus L: [153568]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      5. 2640867Domain d2vusm_: 2vus M: [153569]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      6. 2640868Domain d2vusn_: 2vus N: [153570]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      7. 2640869Domain d2vuso_: 2vus O: [153571]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
      8. 2640870Domain d2vusp_: 2vus P: [153572]
        Other proteins in same PDB: d2vusa_, d2vusb_, d2vusc_, d2vusd_, d2vuse_, d2vusf_, d2vusg_, d2vush_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, so4, zn
    2. Domains for 2vut:
      1. 2640855Domain d2vuti_: 2vut I: [153581]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      2. 2640856Domain d2vutj_: 2vut J: [153582]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      3. 2640857Domain d2vutk_: 2vut K: [153583]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      4. 2640858Domain d2vutl_: 2vut L: [153584]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      5. 2640859Domain d2vutm_: 2vut M: [153585]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      6. 2640860Domain d2vutn_: 2vut N: [153586]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      7. 2640861Domain d2vuto_: 2vut O: [153587]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
      8. 2640862Domain d2vutp_: 2vut P: [153588]
        Other proteins in same PDB: d2vuta_, d2vutb_, d2vutc_, d2vutd_, d2vute_, d2vutf_, d2vutg_, d2vuth_
        automated match to d1gnfa_
        protein/DNA complex; complexed with cl, gol, nad, zn
    3. Domains for 2vuu:
      1. 2640871Domain d2vuui_: 2vuu I: [153597]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      2. 2640872Domain d2vuuj_: 2vuu J: [153598]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      3. 2640873Domain d2vuuk_: 2vuu K: [153599]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      4. 2640874Domain d2vuul_: 2vuu L: [153600]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      5. 2640875Domain d2vuum_: 2vuu M: [153601]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      6. 2640876Domain d2vuun_: 2vuu N: [153602]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      7. 2640877Domain d2vuuo_: 2vuu O: [153603]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
      8. 2640878Domain d2vuup_: 2vuu P: [153604]
        Other proteins in same PDB: d2vuua_, d2vuub_, d2vuuc_, d2vuud_, d2vuue_, d2vuuf_, d2vuug_, d2vuuh_
        automated match to d1gnfa_
        protein/DNA complex; complexed with nap, zn
  4. 2640879Geobacillus stearothermophilus [TaxId:1422] [255900] (1 PDB entry)
  5. 2640881Human (Homo sapiens) [TaxId:9606] [187379] (11 PDB entries)
    1. Domains for 1w4r:
      1. 2640882Domain d1w4ra2: 1w4r A:151-191 [230357]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      2. 2640883Domain d1w4rb2: 1w4r B:151-191 [230355]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      3. 2640884Domain d1w4rc2: 1w4r C:151-191 [230359]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      4. 2640885Domain d1w4rd2: 1w4r D:151-191 [230361]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      5. 2640886Domain d1w4re2: 1w4r E:151-191 [230363]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      6. 2640887Domain d1w4rf2: 1w4r F:151-191 [230365]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      7. 2640888Domain d1w4rg2: 1w4r G:151-191 [230367]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
      8. 2640889Domain d1w4rh2: 1w4r H:151-191 [230369]
        Other proteins in same PDB: d1w4ra1, d1w4rb1, d1w4rc1, d1w4rd1, d1w4re1, d1w4rf1, d1w4rg1, d1w4rh1
        automated match to d1xbta2
        complexed with dtu, ttp, zn
    2. Domain for 2a66:
    3. Domain for 2ebl:
    4. Domain for 2jtg:
    5. Domain for 2l1g:
    6. Domains for 2lzu:
      1. 2640903Domain d2lzua1: 2lzu A:36-68 [256405]
        automated match to d2d8ya1
        complexed with zn
      2. 2640904Domain d2lzua2: 2lzu A:69-107 [256406]
        automated match to d2d8ya2
        complexed with zn
    7. Domains for 2o10:
      1. 2640901Domain d2o10a1: 2o10 A:7-35 [243261]
        automated match to d1a7ia1
        complexed with zn
      2. 2640902Domain d2o10a2: 2o10 A:36-66 [243262]
        automated match to d1a7ia2
        complexed with zn
    8. Domains for 2o13:
      1. 2640905Domain d2o13a1: 2o13 A:119-144 [243263]
        automated match to d1cxxa1
        complexed with zn
      2. 2640906Domain d2o13a2: 2o13 A:145-176 [243264]
        automated match to d1ibia2
        complexed with zn
    9. Domains for 2wvj:
      1. 2640891Domain d2wvja2: 2wvj A:151-191 [231526]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d1xbta2
        complexed with mg, ttp, zn; mutant
      2. 2640892Domain d2wvjb2: 2wvj B:151-192 [231520]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d1xbta2
        complexed with mg, ttp, zn; mutant
      3. 2640893Domain d2wvjc2: 2wvj C:151-191 [231522]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d1xbta2
        complexed with mg, ttp, zn; mutant
      4. 2640894Domain d2wvjd2: 2wvj D:151-191 [231528]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d1xbta2
        complexed with mg, ttp, zn; mutant
      5. 2640895Domain d2wvje2: 2wvj E:151-191 [231527]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d1xbta2
        complexed with mg, ttp, zn; mutant
      6. 2640896Domain d2wvjf2: 2wvj F:151-191 [238984]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d2wvjb2
        complexed with mg, ttp, zn; mutant
      7. 2640897Domain d2wvjg2: 2wvj G:151-191 [238986]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d2wvjb2
        complexed with mg, ttp, zn; mutant
      8. 2640898Domain d2wvjh2: 2wvj H:151-191 [238988]
        Other proteins in same PDB: d2wvja1, d2wvjb1, d2wvjc1, d2wvjd1, d2wvje1, d2wvjf1, d2wvjg1, d2wvjh1
        automated match to d2wvjb2
        complexed with mg, ttp, zn; mutant
    10. Domain for 4nrv:
    11. Domain for 5itq:
  6. 2640910Lactococcus lactis [TaxId:1359] [256615] (1 PDB entry)
  7. 2640913Leishmania major [TaxId:5664] [346432] (3 PDB entries)
    1. Domains for 4uxh:
      1. 2640914Domain d4uxha2: 4uxh A:138-179 [345456]
        Other proteins in same PDB: d4uxha1, d4uxhb1
        automated match to d5fuwa2
        complexed with t5a, zn
      2. 2640915Domain d4uxhb2: 4uxh B:138-181 [345458]
        Other proteins in same PDB: d4uxha1, d4uxhb1
        automated match to d5fuwa2
        complexed with t5a, zn
    2. Domains for 4uxi:
      1. 2640916Domain d4uxia2: 4uxi A:138-181 [345460]
        Other proteins in same PDB: d4uxia1, d4uxib1
        automated match to d5fuwa2
        complexed with po4, thm, zn
      2. 2640917Domain d4uxib2: 4uxi B:138-180 [345462]
        Other proteins in same PDB: d4uxia1, d4uxib1
        automated match to d5fuwa2
        complexed with po4, thm, zn
    3. Domains for 4uxj:
      1. 2640918Domain d4uxja2: 4uxj A:138-182 [345464]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      2. 2640919Domain d4uxjb2: 4uxj B:138-179 [345466]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      3. 2640920Domain d4uxjc2: 4uxj C:138-179 [345468]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      4. 2640921Domain d4uxjd2: 4uxj D:138-179 [345470]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      5. 2640922Domain d4uxje2: 4uxj E:138-179 [345472]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      6. 2640923Domain d4uxjf2: 4uxj F:138-181 [345474]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      7. 2640924Domain d4uxjg2: 4uxj G:138-179 [345476]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
      8. 2640925Domain d4uxjh2: 4uxj H:138-177 [345478]
        Other proteins in same PDB: d4uxja1, d4uxjb1, d4uxjc1, d4uxjd1, d4uxje1, d4uxjf1, d4uxjg1, d4uxjh1
        automated match to d5fuwa2
        complexed with mg, ttp, zn
  8. 2640926Neisseria meningitidis [TaxId:996307] [391911] (1 PDB entry)
  9. 2640929Trypanosome (Trypanosoma brucei) [TaxId:5691] [319948] (4 PDB entries)
    1. Domains for 5fuv:
      1. 2640934Domain d5fuva2: 5fuv A:339-384 [320002]
        Other proteins in same PDB: d5fuva1, d5fuvb1
        automated match to d1xbta2
        complexed with gol, po4, thm, zn
      2. 2640935Domain d5fuvb2: 5fuv B:339-383 [320080]
        Other proteins in same PDB: d5fuva1, d5fuvb1
        automated match to d1xbta2
        complexed with gol, po4, thm, zn
    2. Domains for 5fuw:
      1. 2640930Domain d5fuwa2: 5fuw A:339-384 [320084]
        Other proteins in same PDB: d5fuwa1, d5fuwb1
        automated match to d1xbta2
        complexed with po4, qbt, thm, zn
      2. 2640931Domain d5fuwb2: 5fuw B:339-384 [320007]
        Other proteins in same PDB: d5fuwa1, d5fuwb1
        automated match to d1xbta2
        complexed with po4, qbt, thm, zn
    3. Domains for 5fux:
      1. 2640932Domain d5fuxa2: 5fux A:339-384 [319957]
        Other proteins in same PDB: d5fuxa1, d5fuxb1
        automated match to d1xbta2
        complexed with mg, po4, qbt, zn
      2. 2640933Domain d5fuxb2: 5fux B:339-384 [320198]
        Other proteins in same PDB: d5fuxa1, d5fuxb1
        automated match to d1xbta2
        complexed with mg, po4, qbt, zn
    4. Domains for 5fuy:
      1. 2640936Domain d5fuya2: 5fuy A:339-384 [320062]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn
      2. 2640937Domain d5fuyb2: 5fuy B:339-383 [320178]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn
      3. 2640938Domain d5fuyc2: 5fuy C:339-384 [320096]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn
      4. 2640939Domain d5fuyd2: 5fuy D:339-382 [319949]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn
      5. 2640940Domain d5fuye2: 5fuy E:339-384 [320040]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn
      6. 2640941Domain d5fuyf2: 5fuy F:339-384 [320143]
        Other proteins in same PDB: d5fuya1, d5fuyb1, d5fuyc1, d5fuyd1, d5fuye1, d5fuye3, d5fuyf1
        automated match to d1xbta2
        complexed with po4, qbt, zn

More info for Protein automated matches from g.39.1.0: automated matches

Timeline for Protein automated matches from g.39.1.0: automated matches: