Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1143363Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1160658Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 1160659Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 1161188Family c.26.1.0: automated matches [191377] (1 protein)
    not a true family
  6. 1161189Protein automated matches [190459] (18 species)
    not a true protein

Species:

  1. 1161190Aeropyrum pernix [TaxId:56636] [189259] (2 PDB entries)
    1. Domain for 3a04:
    2. Domain for 3a05:
  2. 1161193Burkholderia pseudomallei [TaxId:320372] [189579] (1 PDB entry)
  3. 1161195Burkholderia thailandensis [TaxId:271848] [189811] (1 PDB entry)
  4. 1161198Campylobacter jejuni [TaxId:192222] [189366] (3 PDB entries)
    1. Domain for 3mxt:
    2. Domains for 3tzl:
      1. 1161201Domain d3tzla_: 3tzl A: [186028]
        automated match to d1i6ka_
        protein/RNA complex; complexed with adp, na, po4, trp
      2. 1161202Domain d3tzlb_: 3tzl B: [186029]
        automated match to d1i6ka_
        protein/RNA complex; complexed with adp, na, po4, trp
    3. Domain for 3uy4:
  5. 1161203Coxiella burnetii [TaxId:227377] [195012] (1 PDB entry)
  6. 1161205Cryptosporidium parvum [TaxId:353152] [188948] (1 PDB entry)
  7. 1161208Deinococcus radiodurans [TaxId:1299] [187374] (1 PDB entry)
  8. 1161212Enterococcus faecalis [TaxId:1351] [189996] (3 PDB entries)
    1. Domains for 3nd5:
      1. 1161213Domain d3nd5a_: 3nd5 A: [182156]
        automated match to d1gn8a_
      2. 1161214Domain d3nd5b_: 3nd5 B: [182157]
        automated match to d1gn8a_
      3. 1161215Domain d3nd5c_: 3nd5 C: [182158]
        automated match to d1gn8a_
      4. 1161216Domain d3nd5d_: 3nd5 D: [182159]
        automated match to d1gn8a_
      5. 1161217Domain d3nd5e_: 3nd5 E: [182160]
        automated match to d1gn8a_
      6. 1161218Domain d3nd5f_: 3nd5 F: [182161]
        automated match to d1gn8a_
    2. Domains for 3nd6:
      1. 1161219Domain d3nd6a_: 3nd6 A: [182162]
        automated match to d1gn8a_
        complexed with atp
      2. 1161220Domain d3nd6b_: 3nd6 B: [182163]
        automated match to d1gn8a_
        complexed with atp
      3. 1161221Domain d3nd6c_: 3nd6 C: [182164]
        automated match to d1gn8a_
        complexed with atp
      4. 1161222Domain d3nd6d_: 3nd6 D: [182165]
        automated match to d1gn8a_
        complexed with atp
      5. 1161223Domain d3nd6e_: 3nd6 E: [182166]
        automated match to d1gn8a_
        complexed with atp
      6. 1161224Domain d3nd6f_: 3nd6 F: [182167]
        automated match to d1gn8a_
        complexed with atp
    3. Domains for 3nd7:
      1. 1161225Domain d3nd7a_: 3nd7 A: [182168]
        automated match to d1gn8a_
        complexed with pny
      2. 1161226Domain d3nd7b_: 3nd7 B: [182169]
        automated match to d1gn8a_
        complexed with pny
      3. 1161227Domain d3nd7c_: 3nd7 C: [182170]
        automated match to d1gn8a_
        complexed with pny
      4. 1161228Domain d3nd7d_: 3nd7 D: [182171]
        automated match to d1gn8a_
        complexed with pny
      5. 1161229Domain d3nd7e_: 3nd7 E: [182172]
        automated match to d1gn8a_
        complexed with pny
      6. 1161230Domain d3nd7f_: 3nd7 F: [182173]
        automated match to d1gn8a_
        complexed with pny
  9. Francisella tularensis [TaxId:119856] [193711] (0 PDB entries)
  10. 1161232Francisella tularensis [TaxId:177416] [196438] (1 PDB entry)
  11. 1161234Helicobacter pylori [TaxId:85962] [193641] (2 PDB entries)
    1. Domain for 3nv7:
    2. Domain for 3otw:
  12. 1161237Human (Homo sapiens) [TaxId:9606] [188230] (2 PDB entries)
    1. Domains for 2pid:
      1. 1161238Domain d2pida_: 2pid A: [167192]
        automated match to d1tyae_
        protein/RNA complex; complexed with ysa
      2. 1161239Domain d2pidb_: 2pid B: [167193]
        automated match to d1tyae_
        protein/RNA complex; complexed with ysa
    2. Domains for 3zxi:
      1. 1161240Domain d3zxia_: 3zxi A: [186656]
        automated match to d1tyae_
        protein/RNA complex; complexed with tya
      2. 1161241Domain d3zxib_: 3zxi B: [186657]
        automated match to d1tyae_
        protein/RNA complex; complexed with tya
  13. 1161242Mycoplasma pneumoniae [TaxId:272634] [188426] (1 PDB entry)
  14. 1161247Staphylococcus aureus [TaxId:1280] [189083] (1 PDB entry)
  15. 1161249Staphylococcus aureus [TaxId:282458] [189403] (1 PDB entry)
  16. 1161252Staphylococcus aureus [TaxId:93061] [189395] (2 PDB entries)
    1. Domains for 3ag5:
      1. 1161255Domain d3ag5a_: 3ag5 A: [172140]
        automated match to d1v8fa_
      2. 1161256Domain d3ag5b_: 3ag5 B: [172141]
        automated match to d1v8fa_
    2. Domains for 3ag6:
      1. 1161253Domain d3ag6a_: 3ag6 A: [172142]
        automated match to d1v8fa_
        complexed with acy, paj, pg4
      2. 1161254Domain d3ag6b_: 3ag6 B: [172143]
        automated match to d1v8fa_
        complexed with acy, paj, pg4
  17. 1161257Trypanosome (Trypanosoma brucei) [TaxId:5691] [188998] (1 PDB entry)
  18. 1161260Vibrio parahaemolyticus [TaxId:670] [196584] (1 PDB entry)

More info for Protein automated matches from c.26.1.0: automated matches

Timeline for Protein automated matches from c.26.1.0: automated matches: