Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2360460Superfamily b.1.6: Cadherin-like [49313] (3 families) (S)
  5. 2360564Family b.1.6.0: automated matches [191376] (1 protein)
    not a true family
  6. 2360565Protein automated matches [190458] (4 species)
    not a true protein

Species:

  1. 2360566African clawed frog (Xenopus laevis) [TaxId:8355] [225845] (1 PDB entry)
  2. 2360568Chicken (Gallus gallus) [TaxId:9031] [196808] (4 PDB entries)
    1. Domains for 1zvn:
      1. 2360570Domain d1zvna1: 1zvn A:2-98 [196810]
        Other proteins in same PDB: d1zvna2, d1zvnb2
        automated match to d2a4ca_
      2. 2360571Domain d1zvnb1: 1zvn B:2-98 [196809]
        Other proteins in same PDB: d1zvna2, d1zvnb2
        automated match to d2a4ca_
    2. Domains for 3k5s:
      1. 2360576Domain d3k5sa1: 3k5s A:2-100 [212178]
        Other proteins in same PDB: d3k5sa3, d3k5sb3
        automated match to d1ncja1
        complexed with ca
      2. 2360577Domain d3k5sa2: 3k5s A:101-217 [212179]
        Other proteins in same PDB: d3k5sa3, d3k5sb3
        automated match to d1ncja2
        complexed with ca
      3. 2360578Domain d3k5sb1: 3k5s B:2-100 [212180]
        Other proteins in same PDB: d3k5sa3, d3k5sb3
        automated match to d1ncja1
        complexed with ca
      4. 2360579Domain d3k5sb2: 3k5s B:101-217 [212181]
        Other proteins in same PDB: d3k5sa3, d3k5sb3
        automated match to d1ncja2
        complexed with ca
    3. Domain for 3k6i:
    4. Domains for 3ppe:
      1. 2360572Domain d3ppea1: 3ppe A:1-97 [233261]
        automated match to d3lndd1
        complexed with ca
      2. 2360573Domain d3ppea2: 3ppe A:98-203 [233262]
        automated match to d3lnda2
        complexed with ca
      3. 2360574Domain d3ppeb1: 3ppe B:1-97 [233263]
        automated match to d3lndd1
        complexed with ca
      4. 2360575Domain d3ppeb2: 3ppe B:98-203 [233264]
        automated match to d3lnda2
        complexed with ca
  3. 2360580Human (Homo sapiens) [TaxId:9606] [255601] (16 PDB entries)
    1. Domain for 2v37:
    2. Domain for 2yqg:
    3. Domains for 4oy9:
      1. 2360583Domain d4oy9a1: 4oy9 A:1-101 [270989]
        automated match to d1ff5a1
        complexed with ca
      2. 2360584Domain d4oy9a2: 4oy9 A:102-213 [270990]
        automated match to d1ff5a2
        complexed with ca
    4. Domains for 4zml:
      1. 2360586Domain d4zmla1: 4zml A:1-101 [322368]
        automated match to d4oy9a1
        complexed with ca, cl, p6g, pg4
      2. 2360587Domain d4zmla2: 4zml A:102-213 [322369]
        automated match to d4oy9a2
        complexed with ca, cl, p6g, pg4
    5. Domains for 4zmn:
      1. 2360610Domain d4zmna1: 4zmn A:1-101 [322384]
        automated match to d1ff5a1
        complexed with ca, gol
      2. 2360611Domain d4zmna2: 4zmn A:102-213 [322385]
        automated match to d1ff5a2
        complexed with ca, gol
    6. Domains for 4zmo:
      1. 2360608Domain d4zmoa1: 4zmo A:1-101 [322414]
        automated match to d4oy9a1
        complexed with ca
      2. 2360609Domain d4zmoa2: 4zmo A:102-213 [322415]
        automated match to d4oy9a2
        complexed with ca
    7. Domains for 4zmp:
      1. 2360590Domain d4zmpa1: 4zmp A:1-101 [322394]
        automated match to d4oy9a1
        complexed with ca
      2. 2360591Domain d4zmpa2: 4zmp A:102-213 [322395]
        automated match to d4oy9a2
        complexed with ca
    8. Domains for 4zmq:
      1. 2360592Domain d4zmqa1: 4zmq A:0-101 [322360]
        automated match to d1ff5a1
        complexed with 1pe, ca
      2. 2360593Domain d4zmqa2: 4zmq A:102-213 [322361]
        automated match to d1ff5a2
        complexed with 1pe, ca
      3. 2360594Domain d4zmqb1: 4zmq B:0-101 [322374]
        automated match to d1ff5a1
        complexed with 1pe, ca
      4. 2360595Domain d4zmqb2: 4zmq B:102-213 [322375]
        automated match to d1ff5a2
        complexed with 1pe, ca
    9. Domains for 4zmt:
      1. 2360612Domain d4zmta1: 4zmt A:0-101 [322355]
        automated match to d1ff5a1
        complexed with ca
      2. 2360613Domain d4zmta2: 4zmt A:102-213 [322356]
        automated match to d1ff5a2
        complexed with ca
      3. 2360614Domain d4zmtb1: 4zmt B:0-101 [322427]
        automated match to d1ff5a1
        complexed with ca
      4. 2360615Domain d4zmtb2: 4zmt B:102-215 [322428]
        automated match to d1ff5a2
        complexed with ca
      5. 2360616Domain d4zmtc1: 4zmt C:0-101 [322418]
        automated match to d1ff5a1
        complexed with ca
      6. 2360617Domain d4zmtc2: 4zmt C:102-213 [322419]
        automated match to d1ff5a2
        complexed with ca
      7. 2360618Domain d4zmtd1: 4zmt D:0-101 [322339]
        automated match to d1ff5a1
        complexed with ca
      8. 2360619Domain d4zmtd2: 4zmt D:102-214 [322340]
        automated match to d1ff5a2
        complexed with ca
      9. 2360620Domain d4zmte1: 4zmt E:0-101 [322386]
        automated match to d1ff5a1
        complexed with ca
      10. 2360621Domain d4zmte2: 4zmt E:102-215 [322387]
        automated match to d1ff5a2
        complexed with ca
      11. 2360622Domain d4zmtf1: 4zmt F:0-101 [322351]
        automated match to d1ff5a1
        complexed with ca
      12. 2360623Domain d4zmtf2: 4zmt F:102-209 [344138]
        complexed with ca
    10. Domains for 4zmv:
      1. 2360600Domain d4zmva1: 4zmv A:0-101 [322397]
        automated match to d1ff5a1
        complexed with ca, gol, ni, so4
      2. 2360601Domain d4zmva2: 4zmv A:102-213 [322398]
        automated match to d1ff5a2
        complexed with ca, gol, ni, so4
      3. 2360602Domain d4zmvb1: 4zmv B:0-101 [322330]
        automated match to d1ff5a1
        complexed with ca, gol, ni, so4
      4. 2360603Domain d4zmvb2: 4zmv B:102-213 [322331]
        automated match to d1ff5a2
        complexed with ca, gol, ni, so4
    11. Domains for 4zmw:
      1. 2360596Domain d4zmwa1: 4zmw A:1-101 [322404]
        automated match to d1ff5a1
        complexed with ca, ni, so4
      2. 2360597Domain d4zmwa2: 4zmw A:102-213 [322405]
        automated match to d1ff5a2
        complexed with ca, ni, so4
      3. 2360598Domain d4zmwb1: 4zmw B:1-101 [322326]
        automated match to d1ff5a1
        complexed with ca, ni, so4
      4. 2360599Domain d4zmwb2: 4zmw B:102-213 [322327]
        automated match to d1ff5a2
        complexed with ca, ni, so4
    12. Domains for 4zmx:
      1. 2360624Domain d4zmxa1: 4zmx A:4-101 [322390]
        automated match to d4oy9a1
        complexed with ca
      2. 2360625Domain d4zmxa2: 4zmx A:102-213 [322391]
        automated match to d4oy9a2
        complexed with ca
      3. 2360626Domain d4zmxb1: 4zmx B:5-101 [322378]
        automated match to d4oy9a1
        complexed with ca
      4. 2360627Domain d4zmxb2: 4zmx B:102-213 [322379]
        automated match to d4oy9a2
        complexed with ca
    13. Domains for 4zmy:
      1. 2360581Domain d4zmya1: 4zmy A:0-101 [322409]
        automated match to d1ff5a1
        complexed with ca
      2. 2360582Domain d4zmya2: 4zmy A:102-213 [322410]
        automated match to d1ff5a2
        complexed with ca
    14. Domains for 4zmz:
      1. 2360588Domain d4zmza1: 4zmz A:0-101 [322334]
        automated match to d4oy9a1
        complexed with ca
      2. 2360589Domain d4zmza2: 4zmz A:102-213 [322335]
        automated match to d4oy9a2
        complexed with ca
    15. Domains for 5jym:
      1. 2360604Domain d5jyma1: 5jym A:1-101 [327624]
        Other proteins in same PDB: d5jymb1, d5jymb2, d5jymb3, d5jymd1, d5jymd2, d5jymd3
        automated match to d4oy9a1
        complexed with ca
      2. 2360605Domain d5jyma2: 5jym A:102-213 [327625]
        Other proteins in same PDB: d5jymb1, d5jymb2, d5jymb3, d5jymd1, d5jymd2, d5jymd3
        automated match to d4oy9a2
        complexed with ca
      3. 2360606Domain d5jymc1: 5jym C:1-101 [327622]
        Other proteins in same PDB: d5jymb1, d5jymb2, d5jymb3, d5jymd1, d5jymd2, d5jymd3
        automated match to d4oy9a1
        complexed with ca
      4. 2360607Domain d5jymc2: 5jym C:102-213 [327623]
        Other proteins in same PDB: d5jymb1, d5jymb2, d5jymb3, d5jymd1, d5jymd2, d5jymd3
        automated match to d4oy9a2
        complexed with ca
    16. Domain for 5llk:
  4. 2360630Mouse (Mus musculus) [TaxId:10090] [187373] (14 PDB entries)
    1. Domains for 1zxk:
      1. 2360637Domain d1zxka_: 1zxk A: [197710]
        automated match to d1zxkb_
      2. 2360638Domain d1zxkb_: 1zxk B: [193822]
        automated match to d2a4ca_
    2. Domains for 2a4c:
      1. 2360641Domain d2a4ca1: 2a4c A:1-98 [162672]
        Other proteins in same PDB: d2a4ca2, d2a4cb2
        automated match to d1o6sb_
      2. 2360642Domain d2a4cb1: 2a4c B:1-98 [162673]
        Other proteins in same PDB: d2a4ca2, d2a4cb2
        automated match to d1o6sb_
    3. Domains for 2qvf:
      1. 2360639Domain d2qvfb1: 2qvf B:1-101 [205892]
        automated match to d1ncja1
        complexed with ca
      2. 2360640Domain d2qvfb2: 2qvf B:102-213 [205893]
        automated match to d1ncja2
        complexed with ca
    4. Domains for 3k5r:
      1. 2360633Domain d3k5ra1: 3k5r A:2-100 [212174]
        Other proteins in same PDB: d3k5ra3, d3k5rb3
        automated match to d1ncja1
      2. 2360634Domain d3k5ra2: 3k5r A:101-217 [212175]
        Other proteins in same PDB: d3k5ra3, d3k5rb3
        automated match to d1ncja2
      3. 2360635Domain d3k5rb1: 3k5r B:2-100 [212176]
        Other proteins in same PDB: d3k5ra3, d3k5rb3
        automated match to d1ncja1
      4. 2360636Domain d3k5rb2: 3k5r B:101-217 [212177]
        Other proteins in same PDB: d3k5ra3, d3k5rb3
        automated match to d1ncja2
    5. Domains for 3k6f:
      1. 2360631Domain d3k6fa1: 3k6f A:2-99 [212183]
        Other proteins in same PDB: d3k6fa2, d3k6fb2
        automated match to d1ncia_
      2. 2360632Domain d3k6fb1: 3k6f B:2-99 [212184]
        Other proteins in same PDB: d3k6fa2, d3k6fb2
        automated match to d1ncia_
    6. Domains for 3lnd:
      1. 2360643Domain d3lnda1: 3lnd A:5-99 [212950]
        automated match to d1ncja1
        complexed with ca
      2. 2360644Domain d3lnda2: 3lnd A:100-207 [212951]
        automated match to d1ncja2
        complexed with ca
      3. 2360645Domain d3lndb1: 3lnd B:1-99 [212952]
        automated match to d1ncja1
        complexed with ca
      4. 2360646Domain d3lndb2: 3lnd B:100-207 [212953]
        automated match to d1ncja2
        complexed with ca
      5. 2360647Domain d3lndc1: 3lnd C:4-99 [212954]
        automated match to d1ncja1
        complexed with ca
      6. 2360648Domain d3lndc2: 3lnd C:100-207 [212955]
        automated match to d1ncja2
        complexed with ca
      7. 2360649Domain d3lndd1: 3lnd D:1-99 [212956]
        automated match to d1ncja1
        complexed with ca
      8. 2360650Domain d3lndd2: 3lnd D:100-207 [212957]
        automated match to d1ncja2
        complexed with ca
    7. Domains for 5i8d:
      1. 2360651Domain d5i8da1: 5i8d A:1929-2038 [338172]
        automated match to d3q2na2
        complexed with ca
      2. 2360652Domain d5i8da2: 5i8d A:2039-2143 [338173]
        automated match to d3q2na2
        complexed with ca
      3. 2360653Domain d5i8da3: 5i8d A:2144-2263 [338174]
        automated match to d3q2na2
        complexed with ca
    8. Domains for 5tfk:
      1. 3047440Domain d5tfka1: 5tfk A:1929-2038 [347502]
        automated match to d5i8da1
        complexed with ca
      2. 3047441Domain d5tfka2: 5tfk A:2039-2143 [347503]
        automated match to d5i8da2
        complexed with ca
      3. 3047442Domain d5tfka3: 5tfk A:2144-2263 [347504]
        automated match to d5i8da3
        complexed with ca
    9. Domains for 5ulu:
      1. 3047562Domain d5ulua1: 5ulu A:1934-2038 [347624]
        automated match to d5i8da1
        complexed with ca; mutant
      2. 3047563Domain d5ulua2: 5ulu A:2039-2143 [347625]
        automated match to d5i8da2
        complexed with ca; mutant
      3. 3047564Domain d5ulua3: 5ulu A:2144-2262 [347626]
        automated match to d5i8da3
        complexed with ca; mutant
    10. Domains for 5un2:
      1. 3047653Domain d5un2a1: 5un2 A:1931-2038 [347715]
        automated match to d5i8da1
        complexed with ca, k; mutant
      2. 3047654Domain d5un2a2: 5un2 A:2039-2143 [347716]
        automated match to d5i8da2
        complexed with ca, k; mutant
      3. 3047655Domain d5un2a3: 5un2 A:2144-2265 [347717]
        automated match to d5i8da3
        complexed with ca, k; mutant
    11. Domains for 6cg6:
      1. 3051844Domain d6cg6a1: 6cg6 A:1-99 [351906]
        automated match to d3lndb1
        complexed with ca, edo, tam
      2. 3051845Domain d6cg6a2: 6cg6 A:100-207 [351907]
        automated match to d3lnda2
        complexed with ca, edo, tam
    12. Domains for 6cg7:
      1. 3051760Domain d6cg7b1: 6cg7 B:1-99 [351822]
        automated match to d3lndb1
        complexed with ca
      2. 3051765Domain d6cg7b2: 6cg7 B:100-207 [351827]
        automated match to d3lnda2
        complexed with ca
      3. 3051825Domain d6cg7a1: 6cg7 A:1-99 [351887]
        automated match to d3lndb1
        complexed with ca
      4. 3051826Domain d6cg7a2: 6cg7 A:100-207 [351888]
        automated match to d3lnda2
        complexed with ca
    13. Domains for 6cgb:
      1. 3051815Domain d6cgba1: 6cgb A:1-99 [351877]
        automated match to d3lndb1
        complexed with act, ca, gol
      2. 3051816Domain d6cgba2: 6cgb A:100-207 [351878]
        automated match to d3lnda2
        complexed with act, ca, gol
    14. Domains for 6cgu:
      1. 3051761Domain d6cguc1: 6cgu C:1-99 [351823]
        automated match to d3lndb1
        complexed with ca
      2. 3051762Domain d6cgua1: 6cgu A:1-99 [351824]
        automated match to d3lndb1
        complexed with ca
      3. 3051763Domain d6cgua2: 6cgu A:100-207 [351825]
        automated match to d3lnda2
        complexed with ca
      4. 3051764Domain d6cguc2: 6cgu C:100-207 [351826]
        automated match to d3lnda2
        complexed with ca
      5. 3051822Domain d6cgud1: 6cgu D:1-99 [351884]
        automated match to d3lndb1
        complexed with ca
      6. 3051823Domain d6cgud2: 6cgu D:100-207 [351885]
        automated match to d3lnda2
        complexed with ca
      7. 3051886Domain d6cgub1: 6cgu B:1-99 [351948]
        automated match to d3lndb1
        complexed with ca
      8. 3051887Domain d6cgub2: 6cgu B:100-207 [351949]
        automated match to d3lnda2
        complexed with ca

More info for Protein automated matches from b.1.6.0: automated matches

Timeline for Protein automated matches from b.1.6.0: automated matches: