Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 946133Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 946224Superfamily b.34.2: SH3-domain [50044] (2 families) (S)
  5. 946580Family b.34.2.0: automated matches [191375] (1 protein)
    not a true family
  6. 946581Protein automated matches [190457] (5 species)
    not a true protein

Species:

  1. 946582Acanthamoeba castellanii [TaxId:5755] [187629] (1 PDB entry)
  2. 946584Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187372] (6 PDB entries)
    1. Domains for 1yn8:
      1. 946592Domain d1yn8a_: 1yn8 A: [162260]
        automated match to d1uj0a_
        complexed with ca
      2. 946593Domain d1yn8b_: 1yn8 B: [162261]
        automated match to d1uj0a_
        complexed with ca
      3. 946594Domain d1yn8c_: 1yn8 C: [162262]
        automated match to d1uj0a_
        complexed with ca
      4. 946595Domain d1yn8d_: 1yn8 D: [162263]
        automated match to d1uj0a_
        complexed with ca
      5. 946596Domain d1yn8e_: 1yn8 E: [162264]
        automated match to d1uj0a_
        complexed with ca
      6. 946597Domain d1yn8f_: 1yn8 F: [162265]
        automated match to d1uj0a_
        complexed with ca
    2. Domain for 1ynz:
    3. Domains for 1z9z:
      1. 946598Domain d1z9za_: 1z9z A: [162426]
        automated match to d1fyna_
        complexed with so4
      2. 946599Domain d1z9zb_: 1z9z B: [162427]
        automated match to d1fyna_
        complexed with so4
    4. Domain for 1zx6:
    5. Domains for 2a28:
      1. 946585Domain d2a28a_: 2a28 A: [162654]
        automated match to d1zuua1
      2. 946586Domain d2a28b_: 2a28 B: [162655]
        automated match to d1zuua1
      3. 946587Domain d2a28c_: 2a28 C: [162656]
        automated match to d1zuua1
      4. 946588Domain d2a28d_: 2a28 D: [162657]
        automated match to d1zuua1
    6. Domains for 2v1q:
      1. 946589Domain d2v1qa_: 2v1q A: [168292]
        automated match to d1fyna_
        complexed with cl, na, pt
      2. 946590Domain d2v1qb_: 2v1q B: [168293]
        automated match to d1fyna_
        complexed with cl, na, pt
  3. 946601Human (Homo sapiens) [TaxId:9606] [187598] (8 PDB entries)
    1. Domains for 1w6x:
      1. 946613Domain d1w6xa_: 1w6x A: [161905]
        automated match to d1k4us_
      2. 946614Domain d1w6xb_: 1w6x B: [161906]
        automated match to d1k4us_
    2. Domains for 1wyx:
      1. 946603Domain d1wyxa_: 1wyx A: [162008]
        automated match to d1bk2a_
        complexed with edo, mg
      2. 946604Domain d1wyxb_: 1wyx B: [162009]
        automated match to d1bk2a_
        complexed with edo, mg
    3. Domains for 2d1x:
      1. 946607Domain d2d1xa_: 2d1x A: [163553]
        automated match to d1jo8a_
        complexed with so4
      2. 946608Domain d2d1xb_: 2d1x B: [163554]
        automated match to d1jo8a_
        complexed with so4
      3. 946609Domain d2d1xc_: 2d1x C: [163555]
        automated match to d1jo8a_
        complexed with so4
      4. 946610Domain d2d1xd_: 2d1x D: [163556]
        automated match to d1jo8a_
        complexed with so4
    4. Domain for 2o2w:
    5. Domain for 2o31:
    6. Domain for 2o9s:
    7. Domain for 2o9v:
    8. Domains for 3o5z:
      1. 946611Domain d3o5za_: 3o5z A: [182817]
        automated match to d1pnja_
        complexed with cl, mpd
      2. 946612Domain d3o5zb_: 3o5z B: [182818]
        automated match to d1pnja_
        complexed with cl, mpd
  4. 946616Mouse (Mus musculus) [TaxId:10090] [189303] (2 PDB entries)
    1. Domain for 2x3w:
    2. Domain for 3ulr:
  5. 946619Norway rat (Rattus norvegicus) [TaxId:10116] [189104] (1 PDB entry)

More info for Protein automated matches from b.34.2.0: automated matches

Timeline for Protein automated matches from b.34.2.0: automated matches: