Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1877434Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 1877435Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 1877436Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
    automatically mapped to Pfam PF00710
  6. 1877518Protein automated matches [190446] (6 species)
    not a true protein

Species:

  1. 1877519Escherichia coli [TaxId:562] [225264] (3 PDB entries)
    1. Domains for 2him:
      1. 1877524Domain d2hima_: 2him A: [204560]
        automated match to d3ntxa_
        complexed with asn, asp, edo
      2. 1877525Domain d2himb_: 2him B: [204561]
        automated match to d3ntxa_
        complexed with asn, asp, edo
      3. 1877526Domain d2himc_: 2him C: [204562]
        automated match to d3ntxa_
        complexed with asn, asp, edo
      4. 1877527Domain d2himd_: 2him D: [204563]
        automated match to d3ntxa_
        complexed with asn, asp, edo
    2. Domains for 2p2d:
      1. 1877520Domain d2p2da_: 2p2d A: [205415]
        automated match to d3ntxa_
        complexed with gol
      2. 1877521Domain d2p2db_: 2p2d B: [205416]
        automated match to d3ntxa_
        complexed with gol
      3. 1877522Domain d2p2dc_: 2p2d C: [205417]
        automated match to d3ntxa_
        complexed with gol
      4. 1877523Domain d2p2dd_: 2p2d D: [205418]
        automated match to d3ntxa_
        complexed with gol
    3. Domains for 2p2n:
      1. 1877528Domain d2p2na_: 2p2n A: [205431]
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      2. 1877529Domain d2p2nb_: 2p2n B: [205432]
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      3. 1877530Domain d2p2nc_: 2p2n C: [205433]
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      4. 1877531Domain d2p2nd_: 2p2n D: [205434]
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
  2. Methanothermobacter thermautotrophicus [TaxId:145262] [255110] (1 PDB entry)
  3. 1877534Pectobacterium atrosepticum [TaxId:218491] [255007] (1 PDB entry)
  4. 1877543Pectobacterium atrosepticum [TaxId:29471] [187353] (2 PDB entries)
    1. Domains for 2gvn:
      1. 1877544Domain d2gvna_: 2gvn A: [164854]
        automated match to d1hg0a_
        complexed with asp
      2. 1877545Domain d2gvnb_: 2gvn B: [164855]
        automated match to d1hg0a_
        complexed with asp
      3. 1877546Domain d2gvnc_: 2gvn C: [164856]
        automated match to d1hg0a_
        complexed with asp
      4. 1877547Domain d2gvnd_: 2gvn D: [164857]
        automated match to d1hg0a_
        complexed with asp
      5. 1877548Domain d2gvne_: 2gvn E: [164858]
        automated match to d1hg0a_
        complexed with asp
      6. 1877549Domain d2gvnf_: 2gvn F: [164859]
        automated match to d1hg0a_
        complexed with asp
      7. 1877550Domain d2gvng_: 2gvn G: [164860]
        automated match to d1hg0a_
        complexed with asp
      8. 1877551Domain d2gvnh_: 2gvn H: [164861]
        automated match to d1hg0a_
        complexed with asp
    2. Domains for 2hln:
      1. 1877552Domain d2hlna_: 2hln A: [165139]
        automated match to d1hg0a_
        complexed with glu, peg
      2. 1877553Domain d2hlnb_: 2hln B: [165140]
        automated match to d1hg0a_
        complexed with glu, peg
      3. 1877554Domain d2hlnc_: 2hln C: [165141]
        automated match to d1hg0a_
        complexed with glu, peg
      4. 1877555Domain d2hlnd_: 2hln D: [165142]
        automated match to d1hg0a_
        complexed with glu, peg
      5. 1877556Domain d2hlne_: 2hln E: [165143]
        automated match to d1hg0a_
        complexed with glu, peg
      6. 1877557Domain d2hlnf_: 2hln F: [165144]
        automated match to d1hg0a_
        complexed with glu, peg
      7. 1877558Domain d2hlng_: 2hln G: [165145]
        automated match to d1hg0a_
        complexed with glu, peg
      8. 1877559Domain d2hlnh_: 2hln H: [165146]
        automated match to d1hg0a_
        complexed with glu, peg
      9. 1877560Domain d2hlni_: 2hln I: [165147]
        automated match to d1hg0a_
        complexed with glu, peg
      10. 1877561Domain d2hlnj_: 2hln J: [165148]
        automated match to d1hg0a_
        complexed with glu, peg
      11. 1877562Domain d2hlnk_: 2hln K: [165149]
        automated match to d1hg0a_
        complexed with glu, peg
      12. 1877563Domain d2hlnl_: 2hln L: [165150]
        automated match to d1hg0a_
        complexed with glu, peg
  5. 1877564Pectobacterium carotovorum [TaxId:554] [188521] (1 PDB entry)
  6. 1877573Yersinia pestis [TaxId:214092] [189425] (1 PDB entry)

More info for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase

Timeline for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase: