Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1368269Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
  4. 1368270Superfamily c.47.1: Thioredoxin-like [52833] (24 families) (S)
  5. 1368271Family c.47.1.1: Thioltransferase [52834] (16 proteins)
  6. 1368552Protein automated matches [190442] (11 species)
    not a true protein

Species:

  1. 1368553Acetobacter aceti [TaxId:435] [187839] (1 PDB entry)
  2. 1368555Artificial gene [TaxId:32630] [189470] (1 PDB entry)
  3. 1368557Escherichia coli K-12 [TaxId:83333] [188760] (1 PDB entry)
  4. 1368560Escherichia coli [TaxId:562] [187670] (1 PDB entry)
  5. 1368565Escherichia coli [TaxId:83333] [197185] (3 PDB entries)
    1. Domain for 4hua:
    2. Domain for 4ip1:
    3. Domain for 4ip6:
  6. 1368569Hordeum vulgare [TaxId:112509] [188425] (2 PDB entries)
    1. Domains for 2vm1:
      1. 1368570Domain d2vm1a_: 2vm1 A: [168694]
        automated match to d1ti3a_
        complexed with so4
      2. 1368571Domain d2vm1b_: 2vm1 B: [168695]
        automated match to d1ti3a_
        complexed with so4
      3. 1368572Domain d2vm1c_: 2vm1 C: [168696]
        automated match to d1ti3a_
        complexed with so4
      4. 1368573Domain d2vm1d_: 2vm1 D: [168697]
        automated match to d1ti3a_
        complexed with so4
    2. Domains for 2vm2:
      1. 1368574Domain d2vm2a_: 2vm2 A: [168698]
        automated match to d1ti3a_
      2. 1368575Domain d2vm2b_: 2vm2 B: [168699]
        automated match to d1ti3a_
      3. 1368576Domain d2vm2c_: 2vm2 C: [168700]
        automated match to d1ti3a_
      4. 1368577Domain d2vm2d_: 2vm2 D: [168701]
        automated match to d1ti3a_
  7. 1368578Human (Homo sapiens) [TaxId:9606] [189547] (5 PDB entries)
    1. Domains for 2yan:
      1. 1368579Domain d2yana_: 2yan A: [170708]
        automated match to d1wika_
        complexed with cl, edo, fe, gsh, so4
      2. 1368580Domain d2yanb_: 2yan B: [170709]
        automated match to d1wika_
        complexed with cl, edo, fe, gsh, so4
    2. Domain for 3kd0:
    3. Domains for 3qfa:
      1. 1368584Domain d3qfac_: 3qfa C: [200327]
        automated match to d3qfbd_
        complexed with fad, gol
      2. 1368585Domain d3qfad_: 3qfa D: [196294]
        automated match to d3e3ea_
        complexed with fad, gol
    4. Domains for 3qfb:
      1. 1368586Domain d3qfbc_: 3qfb C: [200328]
        automated match to d3qfbd_
        complexed with fad, gol
      2. 1368587Domain d3qfbd_: 3qfb D: [196293]
        automated match to d3e3ea_
        complexed with fad, gol
    5. Domains for 3zyw:
      1. 1368581Domain d3zywa_: 3zyw A: [195905]
        automated match to d2yana_
        complexed with edo
      2. 1368582Domain d3zywb_: 3zyw B: [195904]
        automated match to d2yana_
        complexed with edo
  8. 1368588Mycobacterium tuberculosis [TaxId:1773] [226696] (1 PDB entry)
  9. 1368590Mycobacterium tuberculosis [TaxId:83332] [197006] (1 PDB entry)
  10. 1368592Pacific white shrimp (Litopenaeus vannamei) [TaxId:6689] [197071] (4 PDB entries)
    1. Domains for 3zzx:
      1. 1368595Domain d3zzxa_: 3zzx A: [218619]
        automated match to d4aj7a_
        complexed with act, dtu, gol, so4
      2. 1368596Domain d3zzxb_: 3zzx B: [218620]
        automated match to d4aj7a_
        complexed with act, dtu, gol, so4
    2. Domains for 4aj6:
      1. 1368599Domain d4aj6a_: 4aj6 A: [197220]
        automated match to d1xwaa_
        complexed with act, dtt, gol
      2. 1368600Domain d4aj6b_: 4aj6 B: [197217]
        automated match to d1xwaa_
        complexed with act, dtt, gol
    3. Domains for 4aj7:
      1. 1368597Domain d4aj7a_: 4aj7 A: [197072]
        automated match to d1xwaa_
        complexed with act, gol, so4
      2. 1368598Domain d4aj7b_: 4aj7 B: [197218]
        automated match to d1xwaa_
        complexed with act, gol, so4
    4. Domains for 4aj8:
      1. 1368593Domain d4aj8a_: 4aj8 A: [197219]
        automated match to d1xwaa_
        complexed with act, gol, so4
      2. 1368594Domain d4aj8b_: 4aj8 B: [197216]
        automated match to d1xwaa_
        complexed with act, gol, so4
  11. 1368601Spinach (Spinacia oleracea) [TaxId:3562] [187345] (1 PDB entry)

More info for Protein automated matches from c.47.1.1: Thioltransferase

Timeline for Protein automated matches from c.47.1.1: Thioltransferase: