Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. Family b.47.1.0: automated matches [191364] (1 protein)
    not a true family
  6. Protein automated matches [190438] (35 species)
    not a true protein

Species:

  1. Cellulomonas bogoriensis [TaxId:301388] [187656] (1 PDB entry)
  2. Coxsackievirus a16 [TaxId:231417] [238004] (1 PDB entry)
  3. Sharp-nosed viper (Deinagkistrodon acutus) [TaxId:36307] [353569] (1 PDB entry)
  4. Dengue virus [TaxId:11060] [311118] (1 PDB entry)
  5. Dengue virus [TaxId:11064] [311128] (1 PDB entry)
  6. Dengue virus [TaxId:12637] [311239] (1 PDB entry)
  7. Enterovirus a71 [TaxId:39054] [313489] (6 PDB entries)
    1. Domain for 5dp5:
    2. Domains for 5gso:
      1. Domain d5gsoa_: 5gso A: [334818]
        automated match to d2vb0a_
        complexed with 5gi
      2. Domain d5gsob_: 5gso B: [334921]
        automated match to d2vb0a_
        complexed with 5gi
      3. Domain d5gsoc_: 5gso C: [334819]
        automated match to d2vb0a_
        complexed with 5gi
      4. Domain d5gsod_: 5gso D: [334838]
        automated match to d2vb0a_
        complexed with 5gi
      5. Domain d5gsoe_: 5gso E: [334822]
        automated match to d2vb0a_
        complexed with 5gi
    3. Domains for 5gsw:
      1. Domain d5gswa_: 5gsw A: [334821]
        automated match to d2vb0a_
        complexed with 5gi
      2. Domain d5gswb_: 5gsw B: [334820]
        automated match to d2vb0a_
        complexed with 5gi
      3. Domain d5gswc_: 5gsw C: [334837]
        automated match to d2vb0a_
        complexed with 5gi
      4. Domain d5gswd_: 5gsw D: [334862]
        automated match to d2vb0a_
        complexed with 5gi
      5. Domain d5gswe_: 5gsw E: [334851]
        automated match to d2vb0a_
        complexed with 5gi
    4. Domain for 5hxf:
    5. Domain for 5wq2:
    6. Domain for 6lka:
  8. Escherichia coli K-12 [TaxId:83333] [226179] (2 PDB entries)
    1. Domains for 3sti:
      1. Domain d3stia1: 3sti A:11-237 [216553]
        Other proteins in same PDB: d3stia2, d3stib2
        automated match to d1l1ja_
      2. Domain d3stib1: 3sti B:11-237 [216554]
        Other proteins in same PDB: d3stia2, d3stib2
        automated match to d1l1ja_
      3. Domain d3stic_: 3sti C: [216555]
        Other proteins in same PDB: d3stia2, d3stib2
        automated match to d1l1ja_
    2. Domains for 3stj:
      1. Domain d3stja1: 3stj A:11-236 [233625]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d1ky9a2
      2. Domain d3stjb1: 3stj B:11-236 [233622]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d1ky9a2
      3. Domain d3stjc1: 3stj C:11-236 [233627]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d1ky9a2
      4. Domain d3stjd1: 3stj D:11-236 [233629]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d1ky9a2
      5. Domain d3stje1: 3stj E:11-236 [239759]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      6. Domain d3stjf1: 3stj F:11-236 [239761]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      7. Domain d3stjg1: 3stj G:11-236 [239763]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      8. Domain d3stjh1: 3stj H:11-236 [239765]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      9. Domain d3stji1: 3stj I:11-236 [239767]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      10. Domain d3stjj1: 3stj J:11-236 [239769]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      11. Domain d3stjk1: 3stj K:11-236 [239771]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
      12. Domain d3stjl1: 3stj L:11-236 [239773]
        Other proteins in same PDB: d3stja2, d3stjb2, d3stjc2, d3stjd2, d3stje2, d3stjf2, d3stjg2, d3stjh2, d3stji2, d3stjj2, d3stjk2, d3stjl2
        automated match to d3stjb1
  9. Human (Homo sapiens) [TaxId:9606] [187421] (100 PDB entries)
    1. Domain for 2asu:
    2. Domains for 2bdg:
      1. Domain d2bdga_: 2bdg A: [163046]
        automated match to d1npma_
        complexed with cl, na, ni, pbz
      2. Domain d2bdgb_: 2bdg B: [163047]
        automated match to d1npma_
        complexed with cl, na, ni, pbz
    3. Domains for 2bdh:
      1. Domain d2bdha_: 2bdh A: [241288]
        automated match to d2bdga_
        complexed with pbz, zn
      2. Domain d2bdhb_: 2bdh B: [241289]
        automated match to d2bdga_
        complexed with pbz, zn
      3. Domain d2bdhc_: 2bdh C: [241290]
        automated match to d2bdga_
        complexed with pbz, zn
      4. Domain d2bdhd_: 2bdh D: [241291]
        automated match to d2bdga_
        complexed with pbz, zn
    4. Domains for 2bdi:
      1. Domain d2bdia_: 2bdi A: [241292]
        automated match to d2bdga_
        complexed with co, pbz
      2. Domain d2bdib_: 2bdi B: [241293]
        automated match to d2bdga_
        complexed with co, pbz
      3. Domain d2bdic_: 2bdi C: [241294]
        automated match to d2bdga_
        complexed with co, pbz
      4. Domain d2bdid_: 2bdi D: [241295]
        automated match to d2bdga_
        complexed with co, pbz
      5. Domain d2bdie_: 2bdi E: [241296]
        automated match to d2bdga_
        complexed with co, pbz
      6. Domain d2bdif_: 2bdi F: [241297]
        automated match to d2bdga_
        complexed with co, pbz
      7. Domain d2bdig_: 2bdi G: [241298]
        automated match to d2bdga_
        complexed with co, pbz
      8. Domain d2bdih_: 2bdi H: [241299]
        automated match to d2bdga_
        complexed with co, pbz
      9. Domain d2bdii_: 2bdi I: [241300]
        automated match to d2bdga_
        complexed with co, pbz
      10. Domain d2bdij_: 2bdi J: [241301]
        automated match to d2bdga_
        complexed with co, pbz
      11. Domain d2bdik_: 2bdi K: [241302]
        automated match to d2bdga_
        complexed with co, pbz
      12. Domain d2bdil_: 2bdi L: [241303]
        automated match to d2bdga_
        complexed with co, pbz
      13. Domain d2bdim_: 2bdi M: [241304]
        automated match to d2bdga_
        complexed with co, pbz
      14. Domain d2bdin_: 2bdi N: [241305]
        automated match to d2bdga_
        complexed with co, pbz
      15. Domain d2bdio_: 2bdi O: [241306]
        automated match to d2bdga_
        complexed with co, pbz
      16. Domain d2bdip_: 2bdi P: [241307]
        automated match to d2bdga_
        complexed with co, pbz
    5. Domain for 2i6q:
    6. Domain for 2i6s:
    7. Domain for 2odp:
    8. Domain for 2odq:
    9. Domain for 2oq5:
    10. Domain for 2psx:
    11. Domain for 2psy:
    12. Domains for 2qxg:
      1. Domain d2qxga_: 2qxg A: [167865]
        automated match to d1npma_
        complexed with k7i
      2. Domain d2qxgb_: 2qxg B: [167866]
        automated match to d1npma_
        complexed with k7i
    13. Domain for 2qxh:
    14. Domain for 2qxi:
    15. Domain for 2qxj:
    16. Domains for 2qy0:
      1. Domain d2qy0b_: 2qy0 B: [151467]
        Other proteins in same PDB: d2qy0a1, d2qy0a2, d2qy0a3, d2qy0c1, d2qy0c2, d2qy0c3
        automated match to d2qxia_
        complexed with gol
      2. Domain d2qy0d_: 2qy0 D: [151468]
        Other proteins in same PDB: d2qy0a1, d2qy0a2, d2qy0a3, d2qy0c1, d2qy0c2, d2qy0c3
        automated match to d2qxia_
        complexed with gol
    17. Domain for 2zgc:
    18. Domain for 2zgh:
    19. Domain for 2zgj:
    20. Domain for 2zks:
    21. Domains for 3bsq:
      1. Domain d3bsqa1: 3bsq A:16-236 [172813]
        Other proteins in same PDB: d3bsqa2, d3bsqb2, d3bsqc2
        automated match to d1npma_
        complexed with so4
      2. Domain d3bsqb1: 3bsq B:16-236 [172814]
        Other proteins in same PDB: d3bsqa2, d3bsqb2, d3bsqc2
        automated match to d1npma_
        complexed with so4
      3. Domain d3bsqc1: 3bsq C:16-236 [172815]
        Other proteins in same PDB: d3bsqa2, d3bsqb2, d3bsqc2
        automated match to d1npma_
        complexed with so4
    22. Domain for 3dfj:
    23. Domain for 3dfl:
    24. Domain for 3e0n:
    25. Domain for 3e0p:
    26. Domain for 3e16:
    27. Domain for 3e1x:
    28. Domain for 3fvf:
    29. Domain for 3gov:
    30. Domain for 3gyl:
    31. Domains for 3gym:
      1. Domain d3gyma_: 3gym A: [232350]
        Other proteins in same PDB: d3gymi_, d3gymj_
        automated match to d3gylb_
      2. Domain d3gymb_: 3gym B: [232351]
        Other proteins in same PDB: d3gymi_, d3gymj_
        automated match to d3gylb_
    32. Domain for 3num:
    33. Domains for 3tjn:
      1. Domain d3tjna_: 3tjn A: [249916]
        automated match to d3tjoa_
      2. Domain d3tjnb_: 3tjn B: [249917]
        automated match to d3tjoa_
      3. Domain d3tjnd_: 3tjn D: [249918]
        automated match to d3tjoa_
    34. Domains for 3tjo:
      1. Domain d3tjoa1: 3tjo A:161-370 [216839]
        Other proteins in same PDB: d3tjoa2, d3tjob2, d3tjod2
        automated match to d1l1ja_
        complexed with bog, gol, so4; mutant
      2. Domain d3tjob1: 3tjo B:161-370 [216840]
        Other proteins in same PDB: d3tjoa2, d3tjob2, d3tjod2
        automated match to d1l1ja_
        complexed with bog, gol, so4; mutant
      3. Domain d3tjod1: 3tjo D:161-370 [216841]
        Other proteins in same PDB: d3tjoa2, d3tjob2, d3tjod2
        automated match to d1l1ja_
        complexed with bog, gol, so4; mutant
    35. Domains for 4kga:
      1. Domain d4kgaa_: 4kga A: [256852]
        automated match to d2bdga_
        complexed with edo, ni
      2. Domain d4kgab_: 4kga B: [256854]
        automated match to d2bdga_
        complexed with edo, ni
    36. Domain for 4kp0:
    37. Domain for 4na7:
    38. Domain for 4na8:
    39. Domains for 4q7x:
      1. Domain d4q7xa_: 4q7x A: [267270]
        automated match to d4q7za_
        complexed with gol, nag
      2. Domain d4q7xb_: 4q7x B: [267271]
        automated match to d4q7za_
        complexed with gol, nag
    40. Domain for 4q7y:
    41. Domain for 4q7z:
    42. Domains for 4q80:
      1. Domain d4q80a_: 4q80 A: [267272]
        automated match to d4q7za_
        complexed with 2ys, nag
      2. Domain d4q80b_: 4q80 B: [267273]
        automated match to d4q7za_
        complexed with 2ys, nag
    43. Domains for 4qt8:
      1. Domain d4qt8c_: 4qt8 C: [259712]
        automated match to d2asub_
      2. Domain d4qt8d_: 4qt8 D: [259713]
        automated match to d2asub_
    44. Domain for 4ty7:
    45. Domain for 4wxi:
    46. Domain for 4x6m:
    47. Domain for 4x6o:
    48. Domain for 4xde:
    49. Domain for 4xe4:
    50. Domain for 4y8x:
    51. Domain for 4y8y:
    52. Domain for 4y8z:
    53. Domain for 5exl:
    54. Domain for 5exm:
    55. Domain for 5fah:
    56. Domains for 5lpe:
      1. Domain d5lpea_: 5lpe A: [323785]
        automated match to d2qxia_
        complexed with so4, zn
      2. Domain d5lpeb_: 5lpe B: [323813]
        automated match to d2qxia_
        complexed with so4, zn
    57. Domains for 5lpf:
      1. Domain d5lpfa_: 5lpf A: [323753]
        automated match to d2qxia_
        complexed with so4
      2. Domain d5lpfb_: 5lpf B: [323828]
        automated match to d2qxia_
        complexed with so4
    58. Domain for 5nar:
    59. Domain for 5nat:
    60. Domain for 5naw:
    61. Domain for 5nb6:
    62. Domain for 5q0d:
    63. Domain for 5q0e:
    64. Domain for 5q0g:
    65. Domain for 5q0h:
    66. Domain for 5qck:
    67. Domain for 5qcl:
    68. Domain for 5qcm:
    69. Domain for 5qcn:
    70. Domain for 5qqp:
    71. Domain for 5qtt:
    72. Domain for 5qtv:
    73. Domain for 5qtw:
    74. Domain for 5qty:
    75. Domain for 5tks:
    76. Domain for 5tkt:
    77. Domain for 5tku:
    78. Domain for 5wb6:
    79. Domain for 5y9l:
    80. Domain for 5yjk:
    81. Domain for 6c0s:
    82. Domain for 6gt6:
    83. Domains for 6nvb:
      1. Domain d6nvba_: 6nvb A: [370957]
        automated match to d2bdga_
        complexed with gol, so4
      2. Domain d6nvbb_: 6nvb B: [370911]
        automated match to d2bdga_
        complexed with gol, so4
      3. Domain d6nvbc_: 6nvb C: [370933]
        automated match to d2bdga_
        complexed with gol, so4
      4. Domain d6nvbd_: 6nvb D: [370962]
        automated match to d2bdga_
        complexed with gol, so4
    84. Domains for 6qfe:
      1. Domain d6qfea_: 6qfe A: [368735]
        automated match to d2psxa_
        complexed with j08, na, nag
      2. Domain d6qfeb_: 6qfe B: [368761]
        automated match to d2psxa_
        complexed with j08, na, nag
    85. Domains for 6shh:
      1. Domain d6shha_: 6shh A: [385916]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      2. Domain d6shhb_: 6shh B: [385918]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      3. Domain d6shhc_: 6shh C: [385829]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      4. Domain d6shhd_: 6shh D: [385840]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      5. Domain d6shhe_: 6shh E: [385828]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      6. Domain d6shhf_: 6shh F: [385815]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      7. Domain d6shhg_: 6shh G: [385842]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
      8. Domain d6shhh_: 6shh H: [385821]
        automated match to d2qxia_
        complexed with epe, pge, sh7, so4
    86. Domains for 6shi:
      1. Domain d6shia_: 6shi A: [385851]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      2. Domain d6shib_: 6shi B: [385836]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      3. Domain d6shic_: 6shi C: [385831]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      4. Domain d6shid_: 6shi D: [385907]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      5. Domain d6shie_: 6shi E: [385908]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      6. Domain d6shif_: 6shi F: [385900]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      7. Domain d6shig_: 6shi G: [385939]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
      8. Domain d6shih_: 6shi H: [385997]
        automated match to d2qxia_
        complexed with epe, pge, sh8, so4
    87. Domains for 6sju:
      1. Domain d6sjua_: 6sju A: [386077]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      2. Domain d6sjub_: 6sju B: [385894]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      3. Domain d6sjuc_: 6sju C: [385830]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      4. Domain d6sjud_: 6sju D: [386023]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      5. Domain d6sjue_: 6sju E: [385973]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      6. Domain d6sjuf_: 6sju F: [385837]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      7. Domain d6sjug_: 6sju G: [385877]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
      8. Domain d6sjuh_: 6sju H: [385824]
        automated match to d2qxia_
        complexed with epe, lfw, pge, so4
    88. Domain for 6w50:
    89. Domains for 6y4s:
      1. Domain d6y4sa_: 6y4s A: [386082]
        automated match to d2qxia_
        complexed with pge, so4
      2. Domain d6y4sb_: 6y4s B: [386016]
        automated match to d2qxia_
        complexed with pge, so4
      3. Domain d6y4sc_: 6y4s C: [385994]
        automated match to d2qxia_
        complexed with pge, so4
    90. Domains for 6z0e:
      1. Domain d6z0ea_: 6z0e A: [407385]
        automated match to d3numa_
        complexed with ca; mutant
      2. Domain d6z0eb_: 6z0e B: [407398]
        automated match to d3numa_
        complexed with ca; mutant
    91. Domains for 6z0x:
      1. Domain d6z0xa_: 6z0x A: [407472]
        automated match to d3numa_
        complexed with so4; mutant
      2. Domain d6z0xb_: 6z0x B: [407413]
        automated match to d3numa_
        complexed with so4; mutant
      3. Domain d6z0xc_: 6z0x C: [407434]
        automated match to d3numa_
        complexed with so4; mutant
    92. Domains for 6z0y:
      1. Domain d6z0ya1: 6z0y A:161-373 [407383]
        Other proteins in same PDB: d6z0ya2
        automated match to d3numa_
        complexed with so4; mutant
      2. Domain d6z0yb_: 6z0y B: [407494]
        Other proteins in same PDB: d6z0ya2
        automated match to d3numa_
        complexed with so4; mutant
      3. Domain d6z0yc_: 6z0y C: [407518]
        Other proteins in same PDB: d6z0ya2
        automated match to d3numa_
        complexed with so4; mutant
    93. Domain for 7jod:
    94. Domain for 7joe:
    95. Domains for 7jos:
      1. Domain d7josi_: 7jos I: [418182]
        automated match to d6nvbb_
      2. Domain d7josk_: 7jos K: [418183]
        automated match to d6nvbb_
      3. Domain d7josg_: 7jos G: [418181]
        automated match to d6nvbb_
      4. Domain d7josm_: 7jos M: [418184]
        automated match to d6nvbb_
      5. Domain d7jose_: 7jos E: [418180]
        automated match to d6nvbb_
      6. Domain d7josc_: 7jos C: [418179]
        automated match to d6nvbb_
      7. Domain d7josa_: 7jos A: [418178]
        automated match to d6nvbb_
    96. Domain for 7jow:
    97. Domain for 7jqk:
    98. Domain for 7jqn:
    99. Domain for 7jqo:
    100. Domain for 7jqv:
  10. Human coxsackievirus b4 [TaxId:12073] [255005] (1 PDB entry)
  11. Human enterovirus 71 [TaxId:103922] [256150] (1 PDB entry)
  12. Human enterovirus 71 [TaxId:39054] [189708] (8 PDB entries)
    1. Domains for 3qzq:
      1. Domain d3qzqa_: 3qzq A: [184736]
        automated match to d1l1na_
        complexed with ag7; mutant
      2. Domain d3qzqb_: 3qzq B: [184737]
        automated match to d1l1na_
        complexed with ag7; mutant
      3. Domain d3qzqc_: 3qzq C: [184738]
        automated match to d1l1na_
        complexed with ag7; mutant
      4. Domain d3qzqd_: 3qzq D: [184739]
        automated match to d1l1na_
        complexed with ag7; mutant
    2. Domains for 3qzr:
      1. Domain d3qzra_: 3qzr A: [184740]
        automated match to d1l1na_
        complexed with ag7, edo; mutant
      2. Domain d3qzrb_: 3qzr B: [184741]
        automated match to d1l1na_
        complexed with ag7, edo; mutant
    3. Domains for 3r0f:
      1. Domain d3r0fa_: 3r0f A: [184754]
        automated match to d1l1na_
        complexed with ag7, edo; mutant
      2. Domain d3r0fb_: 3r0f B: [184755]
        automated match to d1l1na_
        complexed with ag7, edo; mutant
    4. Domain for 4fvb:
    5. Domain for 4fvd:
    6. Domain for 4ghq:
    7. Domains for 4ght:
      1. Domain d4ghta1: 4ght A:1-180 [221918]
        Other proteins in same PDB: d4ghta2, d4ghtb2
        automated match to d3zv9a_
        complexed with ag7
      2. Domain d4ghtb1: 4ght B:1-180 [221919]
        Other proteins in same PDB: d4ghta2, d4ghtb2
        automated match to d3zv9a_
        complexed with ag7
    8. Domain for 7dnc:
  13. Human rhinovirus 14 [TaxId:12131] [255241] (3 PDB entries)
    1. Domain for 2in2:
    2. Domains for 6kyz:
      1. Domain d6kyza_: 6kyz A: [386149]
        Other proteins in same PDB: d6kyzb_, d6kyzc_, d6kyze_, d6kyzf_
        automated match to d2in2a_
      2. Domain d6kyzd_: 6kyz D: [386147]
        Other proteins in same PDB: d6kyzb_, d6kyzc_, d6kyze_, d6kyzf_
        automated match to d2in2a_
    3. Domains for 6kz0:
      1. Domain d6kz0a1: 6kz0 A:1-179 [386117]
        Other proteins in same PDB: d6kz0a2, d6kz0b_, d6kz0c_, d6kz0d2, d6kz0e_, d6kz0f_, d6kz0g2, d6kz0h_, d6kz0i_, d6kz0j2, d6kz0k_, d6kz0l_
        automated match to d2in2a_
      2. Domain d6kz0d1: 6kz0 D:1-179 [386204]
        Other proteins in same PDB: d6kz0a2, d6kz0b_, d6kz0c_, d6kz0d2, d6kz0e_, d6kz0f_, d6kz0g2, d6kz0h_, d6kz0i_, d6kz0j2, d6kz0k_, d6kz0l_
        automated match to d2in2a_
      3. Domain d6kz0g1: 6kz0 G:1-179 [386120]
        Other proteins in same PDB: d6kz0a2, d6kz0b_, d6kz0c_, d6kz0d2, d6kz0e_, d6kz0f_, d6kz0g2, d6kz0h_, d6kz0i_, d6kz0j2, d6kz0k_, d6kz0l_
        automated match to d2in2a_
      4. Domain d6kz0j1: 6kz0 J:1-179 [386159]
        Other proteins in same PDB: d6kz0a2, d6kz0b_, d6kz0c_, d6kz0d2, d6kz0e_, d6kz0f_, d6kz0g2, d6kz0h_, d6kz0i_, d6kz0j2, d6kz0k_, d6kz0l_
        automated match to d2in2a_
  14. Infectious bronchitis virus [TaxId:11120] [188342] (2 PDB entries)
    1. Domains for 2q6d:
      1. Domain d2q6da_: 2q6d A: [167447]
        Other proteins in same PDB: d2q6db2
        automated match to d1lvod_
      2. Domain d2q6db1: 2q6d B:1-306 [167448]
        Other proteins in same PDB: d2q6db2
        automated match to d1lvod_
      3. Domain d2q6dc_: 2q6d C: [167449]
        Other proteins in same PDB: d2q6db2
        automated match to d1lvod_
    2. Domains for 2q6f:
      1. Domain d2q6fa_: 2q6f A: [167453]
        automated match to d1lvod_
      2. Domain d2q6fb_: 2q6f B: [167454]
        automated match to d1lvod_
  15. Lysobacter sp. [TaxId:186334] [346506] (3 PDB entries)
    1. Domains for 5mrr:
      1. Domain d5mrra_: 5mrr A: [346533]
        automated match to d2ea3a_
        complexed with cl, gol, na, so4, trs
      2. Domain d5mrrb_: 5mrr B: [346615]
        automated match to d2ea3a_
        complexed with cl, gol, na, so4, trs
      3. Domain d5mrrc_: 5mrr C: [346697]
        automated match to d2ea3a_
        complexed with cl, gol, na, so4, trs
      4. Domain d5mrrd_: 5mrr D: [346656]
        automated match to d2ea3a_
        complexed with cl, gol, na, so4, trs
    2. Domains for 5mrs:
      1. Domain d5mrsa_: 5mrs A: [346507]
        automated match to d2ea3a_
        complexed with aes, cl, gol, peg, pge, so4
      2. Domain d5mrsb_: 5mrs B: [346559]
        automated match to d2ea3a_
        complexed with aes, cl, gol, peg, pge, so4
      3. Domain d5mrsc_: 5mrs C: [346508]
        automated match to d2ea3a_
        complexed with aes, cl, gol, peg, pge, so4
      4. Domain d5mrsd_: 5mrs D: [346657]
        automated match to d2ea3a_
        complexed with aes, cl, gol, peg, pge, so4
    3. Domains for 6qoy:
      1. Domain d6qoya_: 6qoy A: [378652]
        automated match to d2ea3a_
        complexed with aes, cl, gol, jat, peg, pge, so4
      2. Domain d6qoyb_: 6qoy B: [378668]
        automated match to d2ea3a_
        complexed with aes, cl, gol, jat, peg, pge, so4
      3. Domain d6qoyc_: 6qoy C: [378653]
        automated match to d2ea3a_
        complexed with aes, cl, gol, jat, peg, pge, so4
      4. Domain d6qoyd_: 6qoy D: [378667]
        automated match to d2ea3a_
        complexed with aes, cl, gol, jat, peg, pge, so4
  16. Middle east respiratory syndrome coronavirus [TaxId:1335626] [272740] (14 PDB entries)
    1. Domains for 4wmd:
      1. Domain d4wmda_: 4wmd A: [272745]
        automated match to d2ynaa_
        complexed with 1pe, peg, pg4, pge
      2. Domain d4wmdb_: 4wmd B: [272741]
        automated match to d2ynaa_
        complexed with 1pe, peg, pg4, pge
      3. Domain d4wmdc_: 4wmd C: [272750]
        automated match to d2ynaa_
        complexed with 1pe, peg, pg4, pge
    2. Domains for 4wme:
      1. Domain d4wmea_: 4wme A: [272742]
        automated match to d2ynaa_
        complexed with edo
      2. Domain d4wmeb_: 4wme B: [272743]
        automated match to d2ynaa_
        complexed with edo
      3. Domain d4wmec_: 4wme C: [272748]
        automated match to d2ynaa_
        complexed with edo
      4. Domain d4wmed_: 4wme D: [272744]
        automated match to d2ynaa_
        complexed with edo
    3. Domains for 4wmf:
      1. Domain d4wmfa_: 4wmf A: [272746]
        automated match to d2ynaa_
        complexed with peg, pg4
      2. Domain d4wmfb_: 4wmf B: [272747]
        automated match to d2ynaa_
        complexed with peg, pg4
      3. Domain d4wmfc_: 4wmf C: [272749]
        automated match to d2ynaa_
        complexed with peg, pg4
    4. Domains for 4ylu:
      1. Domain d4ylua_: 4ylu A: [274082]
        automated match to d2ynaa_
        complexed with act, r30
      2. Domain d4ylub_: 4ylu B: [274079]
        automated match to d2ynaa_
        complexed with act, r30
      3. Domain d4yluc_: 4ylu C: [274081]
        automated match to d2ynaa_
        complexed with act, r30
      4. Domain d4ylud_: 4ylu D: [274080]
        automated match to d2ynaa_
        complexed with act, r30
    5. Domains for 5c3n:
      1. Domain d5c3na_: 5c3n A: [280120]
        automated match to d2ynaa_
      2. Domain d5c3nb_: 5c3n B: [280119]
        automated match to d2ynaa_
    6. Domain for 5wkk:
    7. Domain for 5wkl:
    8. Domain for 5wkm:
    9. Domains for 6vgy:
      1. Domain d6vgya1: 6vgy A:1-300 [392642]
        Other proteins in same PDB: d6vgya2, d6vgyb2
        automated match to d4wmea_
        complexed with qzj
      2. Domain d6vgyb1: 6vgy B:1-301 [392629]
        Other proteins in same PDB: d6vgya2, d6vgyb2
        automated match to d4wmea_
        complexed with qzj
    10. Domains for 6vgz:
      1. Domain d6vgza1: 6vgz A:1-300 [392609]
        Other proteins in same PDB: d6vgza2, d6vgzb2
        automated match to d4wmea_
        complexed with qzg
      2. Domain d6vgzb1: 6vgz B:1-300 [392623]
        Other proteins in same PDB: d6vgza2, d6vgzb2
        automated match to d4wmea_
        complexed with qzg
    11. Domains for 6vh0:
      1. Domain d6vh0a1: 6vh0 A:1-300 [392695]
        Other proteins in same PDB: d6vh0a2, d6vh0b2
        automated match to d4wmea_
        complexed with qzd
      2. Domain d6vh0b1: 6vh0 B:1-301 [392661]
        Other proteins in same PDB: d6vh0a2, d6vh0b2
        automated match to d4wmea_
        complexed with qzd
    12. Domains for 6vh1:
      1. Domain d6vh1a1: 6vh1 A:1-301 [392684]
        Other proteins in same PDB: d6vh1a2, d6vh1b2
        automated match to d4wmea_
        complexed with qz7
      2. Domain d6vh1b1: 6vh1 B:1-301 [392669]
        Other proteins in same PDB: d6vh1a2, d6vh1b2
        automated match to d4wmea_
        complexed with qz7
    13. Domains for 6vh2:
      1. Domain d6vh2a1: 6vh2 A:1-300 [392688]
        Other proteins in same PDB: d6vh2a2, d6vh2b2
        automated match to d4wmea_
        complexed with qz4
      2. Domain d6vh2b1: 6vh2 B:1-303 [392680]
        Other proteins in same PDB: d6vh2a2, d6vh2b2
        automated match to d4wmea_
        complexed with qz4
    14. Domains for 6vh3:
      1. Domain d6vh3a1: 6vh3 A:1-303 [392649]
        Other proteins in same PDB: d6vh3a2
        automated match to d4wmea_
        complexed with qys
      2. Domain d6vh3b_: 6vh3 B: [392639]
        Other proteins in same PDB: d6vh3a2
        automated match to d4wmea_
        complexed with qys
  17. Middle east respiratory syndrome-related coronavirus [TaxId:1335626] [348205] (1 PDB entry)
  18. Mouse (Mus musculus) [TaxId:10090] [354106] (3 PDB entries)
    1. Domain for 5zfh:
    2. Domain for 5zfi:
    3. Domain for 6ahs:
  19. Nocardiopsis alba [TaxId:53437] [187967] (1 PDB entry)
  20. Porcine epidemic diarrhea virus [TaxId:28295] [402688] (1 PDB entry)
  21. Rhinovirus c [TaxId:463676] [382608] (2 PDB entries)
    1. Domain for 6ku7:
    2. Domain for 6ku8:
  22. Saccharopolyspora erythraea [TaxId:1836] [237652] (5 PDB entries)
    1. Domain for 4m7g:
    2. Domain for 5dj7:
    3. Domain for 5dk1:
    4. Domain for 5dkm:
    5. Domain for 5kwm:
  23. Sarcoptes scabiei [TaxId:197185] [188883] (2 PDB entries)
    1. Domains for 3h7o:
      1. Domain d3h7oa_: 3h7o A: [177308]
        automated match to d1fxya_
        complexed with gol, so4
      2. Domain d3h7ob_: 3h7o B: [177309]
        automated match to d1fxya_
        complexed with gol, so4
    2. Domains for 3h7t:
      1. Domain d3h7ta_: 3h7t A: [199492]
        automated match to d3h7tb_
        complexed with zn
      2. Domain d3h7tb_: 3h7t B: [196574]
        automated match to d3h7oa_
        complexed with zn
  24. Staphylococcus aureus [TaxId:1280] [187423] (6 PDB entries)
    1. Domains for 2as9:
      1. Domain d2as9a1: 2as9 A:1-204 [162886]
        Other proteins in same PDB: d2as9a2, d2as9b2
        automated match to d1qy6a_
        complexed with zn
      2. Domain d2as9b1: 2as9 B:3-204 [162887]
        Other proteins in same PDB: d2as9a2, d2as9b2
        automated match to d1qy6a_
        complexed with zn
    2. Domains for 2vid:
      1. Domain d2vida_: 2vid A: [198445]
        automated match to d2vidb_
      2. Domain d2vidb_: 2vid B: [195319]
        automated match to d2as9a_
    3. Domains for 4k1s:
      1. Domain d4k1sa_: 4k1s A: [256833]
        automated match to d2vida_
      2. Domain d4k1sb_: 4k1s B: [258916]
        automated match to d2vida_
    4. Domains for 4k1t:
      1. Domain d4k1ta1: 4k1t A:1-204 [258915]
        Other proteins in same PDB: d4k1ta2, d4k1tb2, d4k1tc2
        automated match to d2vida_
        complexed with cl, so4, zn
      2. Domain d4k1tb1: 4k1t B:1-204 [262785]
        Other proteins in same PDB: d4k1ta2, d4k1tb2, d4k1tc2
        automated match to d4k1ta_
        complexed with cl, so4, zn
      3. Domain d4k1tc1: 4k1t C:1-204 [262786]
        Other proteins in same PDB: d4k1ta2, d4k1tb2, d4k1tc2
        automated match to d4k1ta_
        complexed with cl, so4, zn
    5. Domain for 5mm8:
    6. Domain for 6yv5:
  25. Staphylococcus aureus [TaxId:367830] [400366] (1 PDB entry)
  26. Staphylococcus aureus [TaxId:93061] [193276] (7 PDB entries)
    1. Domains for 2w7s:
      1. Domain d2w7sa_: 2w7s A: [206694]
        automated match to d3ufab_
      2. Domain d2w7sb_: 2w7s B: [206695]
        automated match to d3ufab_
      3. Domain d2w7sc_: 2w7s C: [206696]
        automated match to d3ufab_
      4. Domain d2w7sd_: 2w7s D: [206697]
        automated match to d3ufab_
    2. Domains for 2w7u:
      1. Domain d2w7ua_: 2w7u A: [206698]
        automated match to d3ufab_
      2. Domain d2w7ub_: 2w7u B: [206699]
        automated match to d3ufab_
      3. Domain d2w7uc_: 2w7u C: [206700]
        automated match to d3ufab_
      4. Domain d2w7ud_: 2w7u D: [206701]
        automated match to d3ufab_
    3. Domains for 3ufa:
      1. Domain d3ufaa_: 3ufa A: [200981]
        automated match to d3ufab_
        complexed with cl, vpf
      2. Domain d3ufab_: 3ufa B: [193277]
        automated match to d2as9a_
        complexed with cl, vpf
    4. Domain for 4ink:
    5. Domain for 4inl:
    6. Domains for 4mvn:
      1. Domain d4mvna_: 4mvn A: [236217]
        automated match to d3ufab_
        complexed with i1s
      2. Domain d4mvnb_: 4mvn B: [236218]
        automated match to d3ufab_
        complexed with i1s
      3. Domain d4mvnc_: 4mvn C: [236220]
        automated match to d3ufab_
        complexed with i1s
      4. Domain d4mvnd_: 4mvn D: [236219]
        automated match to d3ufab_
        complexed with i1s
    7. Domain for 6yv6:
  27. Streptomyces monomycini [TaxId:371720] [401122] (1 PDB entry)
  28. Thale cress (Arabidopsis thaliana) [TaxId:3702] [256299] (1 PDB entry)
  29. Thermobifida fusca YX [TaxId:269800] [187339] (1 PDB entry)
  30. Tobacco vein mottling virus [TaxId:12228] [189503] (1 PDB entry)
  31. Tylonycteris bat coronavirus hku4 [TaxId:694007] [228570] (6 PDB entries)
    1. Domains for 2yna:
      1. Domain d2ynaa_: 2yna A: [228571]
        automated match to d3ea8a_
        complexed with gol, imd, ni
      2. Domain d2ynab_: 2yna B: [231657]
        automated match to d2ynaa_
        complexed with gol, imd, ni
    2. Domains for 2ynb:
      1. Domain d2ynba_: 2ynb A: [231658]
        automated match to d2ynaa_
        complexed with g85, ni
      2. Domain d2ynbb_: 2ynb B: [231660]
        automated match to d2ynaa_
        complexed with g85, ni
    3. Domains for 4yo9:
      1. Domain d4yo9a_: 4yo9 A: [275730]
        automated match to d2ynaa_
        complexed with act, fmt, ipa, mpd, sin, zn
      2. Domain d4yo9b_: 4yo9 B: [275732]
        automated match to d2ynaa_
        complexed with act, fmt, ipa, mpd, sin, zn
    4. Domains for 4yog:
      1. Domain d4yoga_: 4yog A: [275729]
        automated match to d2ynaa_
        complexed with 4f5, act
      2. Domain d4yogb_: 4yog B: [275731]
        automated match to d2ynaa_
        complexed with 4f5, act
    5. Domains for 4yoi:
      1. Domain d4yoia_: 4yoi A: [275734]
        automated match to d2ynaa_
        complexed with 4f4, act, fmt
      2. Domain d4yoib_: 4yoi B: [275736]
        automated match to d2ynaa_
        complexed with 4f4, act, fmt
    6. Domains for 4yoj:
      1. Domain d4yoja_: 4yoj A: [275733]
        automated match to d2ynaa_
        complexed with act, fmt, rfm
      2. Domain d4yojb_: 4yoj B: [275735]
        automated match to d2ynaa_
        complexed with act, fmt, rfm
  32. Worm (Eisenia fetida) [TaxId:6396] [188141] (1 PDB entry)
  33. Yellow fever virus [TaxId:11089] [379382] (1 PDB entry)
  34. Japanese encephalitis virus [TaxId:11072] [419922] (1 PDB entry)
  35. Human rhinovirus 2 [TaxId:12130] [420100] (1 PDB entry)

More info for Protein automated matches from b.47.1.0: automated matches

Timeline for Protein automated matches from b.47.1.0: automated matches: