Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1307103Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 1307104Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 1308833Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 1308834Protein automated matches [190437] (23 species)
    not a true protein

Species:

  1. 1308835Agrocybe aegerita [TaxId:5400] [231694] (14 PDB entries)
    1. Domains for 2zgl:
      1. 1308836Domain d2zgla_: 2zgl A: [231695]
        automated match to d1ww4a_
      2. 1308837Domain d2zglb_: 2zgl B: [231696]
        automated match to d1ww4a_
    2. Domain for 2zgm:
    3. Domains for 2zgo:
      1. 1308844Domain d2zgoa_: 2zgo A: [231698]
        automated match to d1ww4a_
        complexed with lat; mutant
      2. 1308845Domain d2zgob_: 2zgo B: [231699]
        automated match to d1ww4a_
        complexed with lat; mutant
    4. Domains for 2zgp:
      1. 1308857Domain d2zgpa_: 2zgp A: [231700]
        automated match to d1ww4a_
        mutant
      2. 1308858Domain d2zgpb_: 2zgp B: [231701]
        automated match to d1ww4a_
        mutant
    5. Domains for 2zgq:
      1. 1308839Domain d2zgqa_: 2zgq A: [231702]
        automated match to d1ww4a_
        mutant
      2. 1308840Domain d2zgqb_: 2zgq B: [231703]
        automated match to d1ww4a_
        mutant
    6. Domain for 2zgs:
    7. Domain for 2zgt:
    8. Domain for 2zgu:
    9. Domains for 3m3c:
      1. 1308842Domain d3m3ca_: 3m3c A: [232870]
        automated match to d1ww4a_
        complexed with npo, so4
      2. 1308843Domain d3m3cb_: 3m3c B: [232871]
        automated match to d1ww4a_
        complexed with npo, so4
    10. Domains for 3m3e:
      1. 1308849Domain d3m3ea_: 3m3e A: [232872]
        automated match to d1ww4a_
        complexed with npo; mutant
      2. 1308850Domain d3m3eb_: 3m3e B: [232873]
        automated match to d1ww4a_
        complexed with npo; mutant
      3. 1308851Domain d3m3ec_: 3m3e C: [232874]
        automated match to d1ww4a_
        complexed with npo; mutant
      4. 1308852Domain d3m3ed_: 3m3e D: [232875]
        automated match to d1ww4a_
        complexed with npo; mutant
    11. Domain for 3m3o:
    12. Domain for 3m3q:
    13. Domains for 3wg1:
      1. 1308846Domain d3wg1a_: 3wg1 A: [233955]
        automated match to d3wg3a_
        complexed with lat
      2. 1308847Domain d3wg1b_: 3wg1 B: [233954]
        automated match to d3wg3a_
        complexed with lat
    14. Domains for 3wg2:
      1. 1308855Domain d3wg2a_: 3wg2 A: [233956]
        automated match to d3wg4a_
        complexed with pge; mutant
      2. 1308856Domain d3wg2b_: 3wg2 B: [233957]
        automated match to d3wg4a_
        complexed with pge; mutant
  2. 1308860Agrocybe cylindracea [TaxId:64608] [225007] (6 PDB entries)
    1. Domains for 1ww4:
      1. 1308877Domain d1ww4a_: 1ww4 A: [203033]
        automated match to d2r0hb_
      2. 1308878Domain d1ww4b_: 1ww4 B: [203034]
        automated match to d2r0hb_
      3. 1308879Domain d1ww4c_: 1ww4 C: [203035]
        automated match to d2r0hb_
      4. 1308880Domain d1ww4d_: 1ww4 D: [203036]
        automated match to d2r0hb_
    2. Domains for 1ww5:
      1. 1308869Domain d1ww5a_: 1ww5 A: [203037]
        automated match to d2r0hb_
      2. 1308870Domain d1ww5b_: 1ww5 B: [203038]
        automated match to d2r0hb_
      3. 1308871Domain d1ww5c_: 1ww5 C: [203039]
        automated match to d2r0hb_
      4. 1308872Domain d1ww5d_: 1ww5 D: [203040]
        automated match to d2r0hb_
    3. Domains for 1ww6:
      1. 1308873Domain d1ww6a_: 1ww6 A: [203041]
        automated match to d2r0hb_
      2. 1308874Domain d1ww6b_: 1ww6 B: [203042]
        automated match to d2r0hb_
      3. 1308875Domain d1ww6c_: 1ww6 C: [203043]
        automated match to d2r0hb_
      4. 1308876Domain d1ww6d_: 1ww6 D: [203044]
        automated match to d2r0hb_
    4. Domains for 1ww7:
      1. 1308865Domain d1ww7a_: 1ww7 A: [203045]
        automated match to d2r0hb_
        complexed with so4
      2. 1308866Domain d1ww7b_: 1ww7 B: [203046]
        automated match to d2r0hb_
        complexed with so4
      3. 1308867Domain d1ww7c_: 1ww7 C: [203047]
        automated match to d2r0hb_
        complexed with so4
      4. 1308868Domain d1ww7d_: 1ww7 D: [203048]
        automated match to d2r0hb_
        complexed with so4
    5. Domains for 3wg3:
      1. 1308861Domain d3wg3a_: 3wg3 A: [229348]
        automated match to d1ww4a_
        complexed with edo, peg
      2. 1308862Domain d3wg3b_: 3wg3 B: [233958]
        automated match to d3wg3a_
        complexed with edo, peg
    6. Domains for 3wg4:
      1. 1308863Domain d3wg4a_: 3wg4 A: [229347]
        automated match to d1ww4a_
        complexed with peg; mutant
      2. 1308864Domain d3wg4b_: 3wg4 B: [233959]
        automated match to d3wg4a_
        complexed with peg; mutant
  3. 1308881Bowringia mildbraedii [TaxId:28956] [187718] (1 PDB entry)
  4. 1308883Clostridium botulinum [TaxId:1491] [225675] (9 PDB entries)
    1. Domain for 2vxr:
    2. Domain for 3fuq:
    3. Domain for 3mpp:
    4. Domains for 3n7k:
      1. 1308894Domain d3n7ka1: 3n7k A:867-1080 [232989]
        Other proteins in same PDB: d3n7ka2, d3n7kb2
        automated match to d3btaa1
      2. 1308895Domain d3n7kb1: 3n7k B:867-1080 [232990]
        Other proteins in same PDB: d3n7ka2, d3n7kb2
        automated match to d3btaa1
    5. Domain for 3pme:
    6. Domains for 3r4s:
      1. 1308887Domain d3r4sa1: 3r4s A:864-1080 [233391]
        Other proteins in same PDB: d3r4sa2, d3r4sb2
        automated match to d3btaa1
        complexed with sia, slb
      2. 1308888Domain d3r4sb1: 3r4s B:864-1080 [233389]
        Other proteins in same PDB: d3r4sa2, d3r4sb2
        automated match to d3btaa1
        complexed with sia, slb
    7. Domain for 3r4u:
    8. Domains for 3rsj:
      1. 1308890Domain d3rsja1: 3rsj A:866-1072 [233495]
        Other proteins in same PDB: d3rsja2
        automated match to d3btaa1
      2. 1308891Domain d3rsjb1: 3rsj B:868-1072 [233497]
        Other proteins in same PDB: d3rsja2
        automated match to d3btaa1
    9. Domain for 4iqp:
  5. 1308896Coprinus cinereus [188451] (2 PDB entries)
    1. Domains for 2r0f:
      1. 1308901Domain d2r0fa_: 2r0f A: [167902]
        automated match to d1ul9a_
      2. 1308902Domain d2r0fb_: 2r0f B: [167903]
        automated match to d1ul9a_
    2. Domains for 2r0h:
      1. 1308897Domain d2r0ha_: 2r0h A: [167904]
        automated match to d1ul9a_
        complexed with cto
      2. 1308898Domain d2r0hb_: 2r0h B: [167905]
        automated match to d1ul9a_
        complexed with cto
      3. 1308899Domain d2r0hc_: 2r0h C: [167906]
        automated match to d1ul9a_
        complexed with cto
      4. 1308900Domain d2r0hd_: 2r0h D: [167907]
        automated match to d1ul9a_
        complexed with cto
  6. 1308903Escherichia coli [TaxId:562] [231350] (1 PDB entry)
  7. 1308905Fungus (Aspergillus aculeatus) [TaxId:5053] [195557] (3 PDB entries)
    1. Domain for 3vl8:
    2. Domains for 3vl9:
      1. 1308906Domain d3vl9a_: 3vl9 A: [217912]
        automated match to d3vl8a_
      2. 1308907Domain d3vl9b_: 3vl9 B: [217913]
        automated match to d3vl8a_
    3. Domains for 3vlb:
      1. 1308909Domain d3vlbb_: 3vlb B: [195563]
        Other proteins in same PDB: d3vlba_, d3vlbc_
        automated match to d1oa2a_
      2. 1308910Domain d3vlbd_: 3vlb D: [201249]
        Other proteins in same PDB: d3vlba_, d3vlbc_
        automated match to d3vlbb_
  8. 1308911Fungus (Melanocarpus albomyces) [TaxId:204285] [188605] (4 PDB entries)
    1. Domains for 2rfw:
      1. 1308912Domain d2rfwa_: 2rfw A: [168093]
        automated match to d1q9ha_
      2. 1308913Domain d2rfwb_: 2rfw B: [168094]
        automated match to d1q9ha_
      3. 1308914Domain d2rfwc_: 2rfw C: [168095]
        automated match to d1q9ha_
      4. 1308915Domain d2rfwd_: 2rfw D: [168096]
        automated match to d1q9ha_
    2. Domains for 2rfy:
      1. 1308916Domain d2rfya_: 2rfy A: [168097]
        automated match to d1q9ha_
        complexed with cbi
      2. 1308917Domain d2rfyb_: 2rfy B: [168098]
        automated match to d1q9ha_
        complexed with cbi
      3. 1308918Domain d2rfyc_: 2rfy C: [168099]
        automated match to d1q9ha_
        complexed with cbi
      4. 1308919Domain d2rfyd_: 2rfy D: [168100]
        automated match to d1q9ha_
        complexed with cbi
    3. Domains for 2rfz:
      1. 1308920Domain d2rfza_: 2rfz A: [168101]
        automated match to d1q9ha_
        complexed with ctr
      2. 1308921Domain d2rfzb_: 2rfz B: [168102]
        automated match to d1q9ha_
        complexed with ctr
      3. 1308922Domain d2rfzc_: 2rfz C: [168103]
        automated match to d1q9ha_
        complexed with ctr
      4. 1308923Domain d2rfzd_: 2rfz D: [168104]
        automated match to d1q9ha_
        complexed with ctr
    4. Domains for 2rg0:
      1. 1308924Domain d2rg0a_: 2rg0 A: [168105]
        automated match to d1q9ha_
        complexed with cbi, ctt
      2. 1308925Domain d2rg0b_: 2rg0 B: [168106]
        automated match to d1q9ha_
        complexed with cbi, ctt
      3. 1308926Domain d2rg0c_: 2rg0 C: [168107]
        automated match to d1q9ha_
        complexed with cbi, ctt
      4. 1308927Domain d2rg0d_: 2rg0 D: [168108]
        automated match to d1q9ha_
        complexed with cbi, ctt
  9. 1308928Gallus gallus [TaxId:9031] [227626] (1 PDB entry)
  10. 1308935Human (Homo sapiens) [TaxId:9606] [187655] (29 PDB entries)
    1. Domains for 2eak:
      1. 1308974Domain d2eaka_: 2eak A: [163920]
        automated match to d1a3ka_
        complexed with dtv, gol, lbt
      2. 1308975Domain d2eakb_: 2eak B: [163921]
        automated match to d1a3ka_
        complexed with dtv, gol, lbt
      3. 1308976Domain d2eakc_: 2eak C: [163922]
        automated match to d1a3ka_
        complexed with dtv, gol, lbt
    2. Domains for 2eal:
      1. 1308958Domain d2eala_: 2eal A: [163923]
        automated match to d1a3ka_
      2. 1308959Domain d2ealb_: 2eal B: [163924]
        automated match to d1a3ka_
    3. Domains for 2jj6:
      1. 1308977Domain d2jj6a_: 2jj6 A: [166212]
        automated match to d1bkza_
      2. 1308978Domain d2jj6b_: 2jj6 B: [166213]
        automated match to d1bkza_
    4. Domain for 2wl1:
    5. Domain for 2yv8:
    6. Domain for 2yxs:
    7. Domain for 2yy1:
    8. Domains for 2zhk:
      1. 1308955Domain d2zhka_: 2zhk A: [171224]
        automated match to d1a3ka_
      2. 1308956Domain d2zhkb_: 2zhk B: [171225]
        automated match to d1a3ka_
    9. Domains for 2zhl:
      1. 1308947Domain d2zhla_: 2zhl A: [171226]
        automated match to d1a3ka_
      2. 1308948Domain d2zhlb_: 2zhl B: [171227]
        automated match to d1a3ka_
      3. 1308949Domain d2zhlc_: 2zhl C: [171228]
        automated match to d1a3ka_
      4. 1308950Domain d2zhld_: 2zhl D: [171229]
        automated match to d1a3ka_
    10. Domains for 2zhm:
      1. 1308951Domain d2zhma_: 2zhm A: [171230]
        automated match to d1a3ka_
        complexed with rpn
      2. 1308952Domain d2zhmb_: 2zhm B: [171231]
        automated match to d1a3ka_
        complexed with rpn
      3. 1308953Domain d2zhmc_: 2zhm C: [171232]
        automated match to d1a3ka_
        complexed with rpn
      4. 1308954Domain d2zhmd_: 2zhm D: [171233]
        automated match to d1a3ka_
        complexed with rpn
    11. Domain for 2zhn:
    12. Domains for 3ap4:
      1. 1308980Domain d3ap4a_: 3ap4 A: [172283]
        automated match to d1a3ka_
        complexed with lbt
      2. 1308981Domain d3ap4b_: 3ap4 B: [172284]
        automated match to d1a3ka_
        complexed with lbt
      3. 1308982Domain d3ap4c_: 3ap4 C: [172285]
        automated match to d1a3ka_
        complexed with lbt
      4. 1308983Domain d3ap4d_: 3ap4 D: [172286]
        automated match to d1a3ka_
        complexed with lbt
    13. Domain for 3ap5:
    14. Domains for 3ap6:
      1. 1308943Domain d3ap6a_: 3ap6 A: [172288]
        automated match to d1a3ka_
        complexed with lat, so4
      2. 1308944Domain d3ap6b_: 3ap6 B: [172289]
        automated match to d1a3ka_
        complexed with lat, so4
      3. 1308945Domain d3ap6c_: 3ap6 C: [172290]
        automated match to d1a3ka_
        complexed with lat, so4
      4. 1308946Domain d3ap6d_: 3ap6 D: [172291]
        automated match to d1a3ka_
        complexed with lat, so4
    15. Domain for 3ap7:
    16. Domain for 3ap9:
    17. Domains for 3apb:
      1. 1308962Domain d3apba_: 3apb A: [172294]
        automated match to d1a3ka_
        complexed with iod
      2. 1308963Domain d3apbb_: 3apb B: [172295]
        automated match to d1a3ka_
        complexed with iod
    18. Domains for 3b9c:
      1. 1308966Domain d3b9ca_: 3b9c A: [172502]
        automated match to d1bkza_
        complexed with bme, so4
      2. 1308967Domain d3b9cb_: 3b9c B: [172503]
        automated match to d1bkza_
        complexed with bme, so4
      3. 1308968Domain d3b9cc_: 3b9c C: [172504]
        automated match to d1bkza_
        complexed with bme, so4
      4. 1308969Domain d3b9cd_: 3b9c D: [172505]
        automated match to d1bkza_
        complexed with bme, so4
    19. Domain for 3lsd:
    20. Domain for 3lse:
    21. Domain for 3nv1:
    22. Domain for 3nv2:
    23. Domain for 3nv3:
    24. Domain for 3nv4:
    25. Domain for 3sh5:
    26. Domains for 3vkn:
      1. 1308964Domain d3vkna_: 3vkn A: [194698]
        automated match to d3ap5a_
        complexed with cl
      2. 1308965Domain d3vknb_: 3vkn B: [194697]
        automated match to d3ap5a_
        complexed with cl
    27. Domains for 3vko:
      1. 1308972Domain d3vkoa_: 3vko A: [194695]
        automated match to d3ap5a_
        complexed with cl
      2. 1308973Domain d3vkob_: 3vko B: [194696]
        automated match to d3ap5a_
        complexed with cl
    28. Domain for 4bmb:
    29. Domains for 4bme:
      1. 1308985Domain d4bmea_: 4bme A: [237763]
        automated match to d1a3ka_
        complexed with lbt; mutant
      2. 1308986Domain d4bmeb_: 4bme B: [237761]
        automated match to d1a3ka_
        complexed with lbt; mutant
  11. 1308989Human rotavirus a [TaxId:10941] [187643] (1 PDB entry)
  12. 1308991Lotus tetragonolobus [TaxId:3868] [188358] (1 PDB entry)
  13. 1308996Mouse (Mus musculus) [TaxId:10090] [187609] (10 PDB entries)
    1. Domains for 2d6k:
      1. 1309010Domain d2d6ka_: 2d6k A: [163591]
        automated match to d1a3ka_
      2. 1309011Domain d2d6kb_: 2d6k B: [163592]
        automated match to d1a3ka_
    2. Domain for 2d6l:
    3. Domains for 2d6m:
      1. 1308999Domain d2d6ma_: 2d6m A: [163594]
        automated match to d1a3ka_
        complexed with lbt
      2. 1309000Domain d2d6mb_: 2d6m B: [163595]
        automated match to d1a3ka_
        complexed with lbt
    4. Domains for 2d6n:
      1. 1309002Domain d2d6na_: 2d6n A: [163596]
        automated match to d1a3ka_
      2. 1309003Domain d2d6nb_: 2d6n B: [163597]
        automated match to d1a3ka_
    5. Domain for 2d6o:
    6. Domains for 2d6p:
      1. 1309012Domain d2d6pa_: 2d6p A: [163599]
        automated match to d1a3ka_
      2. 1309013Domain d2d6pb_: 2d6p B: [163600]
        automated match to d1a3ka_
    7. Domain for 2dyc:
    8. Domains for 2jd4:
      1. 1309004Domain d2jd4a1: 2jd4 A:2678-2872 [230907]
        automated match to d1dyka1
      2. 1309005Domain d2jd4b1: 2jd4 B:2685-2872 [230908]
        automated match to d1dyka1
        complexed with cl, mg
      3. 1309006Domain d2jd4b2: 2jd4 B:2873-3060 [230969]
        automated match to d1okqa2
        complexed with cl, mg
    9. Domain for 3i8t:
    10. Domains for 3pve:
      1. 1308997Domain d3pvea_: 3pve A: [214952]
        automated match to d3v64b_
      2. 1308998Domain d3pveb_: 3pve B: [214953]
        automated match to d3v64b_
  14. 1309014Neocallimastix patriciarum [TaxId:4758] [237916] (3 PDB entries)
    1. Domain for 3wp4:
    2. Domain for 3wp5:
    3. Domain for 3wp6:
  15. 1309018Rhesus monkey (Macaca mulatta) [TaxId:9544] [226434] (1 PDB entry)
  16. 1309020Rotavirus a [TaxId:10941] [187397] (1 PDB entry)
  17. 1309029Rotavirus sp. [TaxId:10970] [195633] (3 PDB entries)
    1. Domain for 4drr:
    2. Domain for 4drv:
    3. Domain for 4ds0:
  18. 1309033Selenomonas ruminantium [TaxId:971] [225445] (1 PDB entry)
  19. 1309038Sphingomonas sp. [188455] (2 PDB entries)
    1. Domain for 2z42:
    2. Domain for 2za9:
  20. 1309041Sphingomonas sp. [TaxId:90322] [187577] (4 PDB entries)
    1. Domain for 2cws:
    2. Domain for 2zaa:
    3. Domain for 2zab:
    4. Domain for 2zac:
  21. 1309046Tropaeolum majus [TaxId:4020] [187334] (4 PDB entries)
    1. Domains for 2uwa:
      1. 1309047Domain d2uwaa_: 2uwa A: [168193]
        automated match to d1umza_
        complexed with gol
      2. 1309048Domain d2uwab_: 2uwa B: [168194]
        automated match to d1umza_
        complexed with gol
      3. 1309049Domain d2uwac_: 2uwa C: [168195]
        automated match to d1umza_
        complexed with gol
    2. Domains for 2uwb:
      1. 1309052Domain d2uwba_: 2uwb A: [168196]
        automated match to d1umzb_
        mutant
      2. 1309053Domain d2uwbb_: 2uwb B: [168197]
        automated match to d1umzb_
        mutant
    3. Domains for 2uwc:
      1. 1309054Domain d2uwca_: 2uwc A: [168198]
        automated match to d1umza_
      2. 1309055Domain d2uwcb_: 2uwc B: [168199]
        automated match to d1umza_
    4. Domains for 2vh9:
      1. 1309050Domain d2vh9a_: 2vh9 A: [206357]
        automated match to d1umza_
        complexed with bgc, gol, zn
      2. 1309051Domain d2vh9b_: 2vh9 B: [206358]
        automated match to d1umza_
        complexed with bgc, gol, zn
  22. 1309056Trypanosoma cruzi [TaxId:5693] [226152] (1 PDB entry)
  23. 1309058Zobellia galactanivorans [TaxId:63186] [224860] (1 PDB entry)

More info for Protein automated matches from b.29.1.0: automated matches

Timeline for Protein automated matches from b.29.1.0: automated matches: