Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 943754Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 943755Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 945308Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 945309Protein automated matches [190437] (11 species)
    not a true protein

Species:

  1. 945310Bowringia mildbraedii [TaxId:28956] [187718] (1 PDB entry)
  2. 945312Coprinus cinereus [188451] (2 PDB entries)
    1. Domains for 2r0f:
      1. 945317Domain d2r0fa_: 2r0f A: [167902]
        automated match to d1ul9a_
      2. 945318Domain d2r0fb_: 2r0f B: [167903]
        automated match to d1ul9a_
    2. Domains for 2r0h:
      1. 945313Domain d2r0ha_: 2r0h A: [167904]
        automated match to d1ul9a_
        complexed with cto
      2. 945314Domain d2r0hb_: 2r0h B: [167905]
        automated match to d1ul9a_
        complexed with cto
      3. 945315Domain d2r0hc_: 2r0h C: [167906]
        automated match to d1ul9a_
        complexed with cto
      4. 945316Domain d2r0hd_: 2r0h D: [167907]
        automated match to d1ul9a_
        complexed with cto
  3. 945319Fungus (Melanocarpus albomyces) [TaxId:204285] [188605] (4 PDB entries)
    1. Domains for 2rfw:
      1. 945320Domain d2rfwa_: 2rfw A: [168093]
        automated match to d1q9ha_
      2. 945321Domain d2rfwb_: 2rfw B: [168094]
        automated match to d1q9ha_
      3. 945322Domain d2rfwc_: 2rfw C: [168095]
        automated match to d1q9ha_
      4. 945323Domain d2rfwd_: 2rfw D: [168096]
        automated match to d1q9ha_
    2. Domains for 2rfy:
      1. 945324Domain d2rfya_: 2rfy A: [168097]
        automated match to d1q9ha_
        complexed with cbi
      2. 945325Domain d2rfyb_: 2rfy B: [168098]
        automated match to d1q9ha_
        complexed with cbi
      3. 945326Domain d2rfyc_: 2rfy C: [168099]
        automated match to d1q9ha_
        complexed with cbi
      4. 945327Domain d2rfyd_: 2rfy D: [168100]
        automated match to d1q9ha_
        complexed with cbi
    3. Domains for 2rfz:
      1. 945328Domain d2rfza_: 2rfz A: [168101]
        automated match to d1q9ha_
        complexed with ctr
      2. 945329Domain d2rfzb_: 2rfz B: [168102]
        automated match to d1q9ha_
        complexed with ctr
      3. 945330Domain d2rfzc_: 2rfz C: [168103]
        automated match to d1q9ha_
        complexed with ctr
      4. 945331Domain d2rfzd_: 2rfz D: [168104]
        automated match to d1q9ha_
        complexed with ctr
    4. Domains for 2rg0:
      1. 945332Domain d2rg0a_: 2rg0 A: [168105]
        automated match to d1q9ha_
        complexed with cbi, ctt
      2. 945333Domain d2rg0b_: 2rg0 B: [168106]
        automated match to d1q9ha_
        complexed with cbi, ctt
      3. 945334Domain d2rg0c_: 2rg0 C: [168107]
        automated match to d1q9ha_
        complexed with cbi, ctt
      4. 945335Domain d2rg0d_: 2rg0 D: [168108]
        automated match to d1q9ha_
        complexed with cbi, ctt
  4. 945336Human (Homo sapiens) [TaxId:9606] [187655] (21 PDB entries)
    1. Domains for 2eak:
      1. 945368Domain d2eaka_: 2eak A: [163920]
        automated match to d1a3ka_
        complexed with dtt, gol, lbt
      2. 945369Domain d2eakb_: 2eak B: [163921]
        automated match to d1a3ka_
        complexed with dtt, gol, lbt
      3. 945370Domain d2eakc_: 2eak C: [163922]
        automated match to d1a3ka_
        complexed with dtt, gol, lbt
    2. Domains for 2eal:
      1. 945357Domain d2eala_: 2eal A: [163923]
        automated match to d1a3ka_
      2. 945358Domain d2ealb_: 2eal B: [163924]
        automated match to d1a3ka_
    3. Domains for 2jj6:
      1. 945371Domain d2jj6a_: 2jj6 A: [166212]
        automated match to d1bkza_
      2. 945372Domain d2jj6b_: 2jj6 B: [166213]
        automated match to d1bkza_
    4. Domain for 2wl1:
    5. Domains for 2zhk:
      1. 945355Domain d2zhka_: 2zhk A: [171224]
        automated match to d1a3ka_
      2. 945356Domain d2zhkb_: 2zhk B: [171225]
        automated match to d1a3ka_
    6. Domains for 2zhl:
      1. 945347Domain d2zhla_: 2zhl A: [171226]
        automated match to d1a3ka_
      2. 945348Domain d2zhlb_: 2zhl B: [171227]
        automated match to d1a3ka_
      3. 945349Domain d2zhlc_: 2zhl C: [171228]
        automated match to d1a3ka_
      4. 945350Domain d2zhld_: 2zhl D: [171229]
        automated match to d1a3ka_
    7. Domains for 2zhm:
      1. 945351Domain d2zhma_: 2zhm A: [171230]
        automated match to d1a3ka_
        complexed with rpn
      2. 945352Domain d2zhmb_: 2zhm B: [171231]
        automated match to d1a3ka_
        complexed with rpn
      3. 945353Domain d2zhmc_: 2zhm C: [171232]
        automated match to d1a3ka_
        complexed with rpn
      4. 945354Domain d2zhmd_: 2zhm D: [171233]
        automated match to d1a3ka_
        complexed with rpn
    8. Domain for 2zhn:
    9. Domains for 3ap4:
      1. 945373Domain d3ap4a_: 3ap4 A: [172283]
        automated match to d1a3ka_
        complexed with lbt
      2. 945374Domain d3ap4b_: 3ap4 B: [172284]
        automated match to d1a3ka_
        complexed with lbt
      3. 945375Domain d3ap4c_: 3ap4 C: [172285]
        automated match to d1a3ka_
        complexed with lbt
      4. 945376Domain d3ap4d_: 3ap4 D: [172286]
        automated match to d1a3ka_
        complexed with lbt
    10. Domain for 3ap5:
    11. Domains for 3ap6:
      1. 945343Domain d3ap6a_: 3ap6 A: [172288]
        automated match to d1a3ka_
        complexed with lat, so4
      2. 945344Domain d3ap6b_: 3ap6 B: [172289]
        automated match to d1a3ka_
        complexed with lat, so4
      3. 945345Domain d3ap6c_: 3ap6 C: [172290]
        automated match to d1a3ka_
        complexed with lat, so4
      4. 945346Domain d3ap6d_: 3ap6 D: [172291]
        automated match to d1a3ka_
        complexed with lat, so4
    12. Domain for 3ap7:
    13. Domain for 3ap9:
    14. Domains for 3apb:
      1. 945361Domain d3apba_: 3apb A: [172294]
        automated match to d1a3ka_
        complexed with iod
      2. 945362Domain d3apbb_: 3apb B: [172295]
        automated match to d1a3ka_
        complexed with iod
    15. Domains for 3b9c:
      1. 945363Domain d3b9ca_: 3b9c A: [172502]
        automated match to d1bkza_
        complexed with bme, so4
      2. 945364Domain d3b9cb_: 3b9c B: [172503]
        automated match to d1bkza_
        complexed with bme, so4
      3. 945365Domain d3b9cc_: 3b9c C: [172504]
        automated match to d1bkza_
        complexed with bme, so4
      4. 945366Domain d3b9cd_: 3b9c D: [172505]
        automated match to d1bkza_
        complexed with bme, so4
    16. Domain for 3lsd:
    17. Domain for 3lse:
    18. Domain for 3nv1:
    19. Domain for 3nv2:
    20. Domain for 3nv3:
    21. Domain for 3nv4:
  5. 945379Human rotavirus a [TaxId:10941] [187643] (1 PDB entry)
  6. 945381Lotus tetragonolobus [TaxId:3868] [188358] (1 PDB entry)
  7. 945383Mouse (Mus musculus) [TaxId:10090] [187609] (7 PDB entries)
    1. Domains for 2d6k:
      1. 945391Domain d2d6ka_: 2d6k A: [163591]
        automated match to d1a3ka_
      2. 945392Domain d2d6kb_: 2d6k B: [163592]
        automated match to d1a3ka_
    2. Domain for 2d6l:
    3. Domains for 2d6m:
      1. 945384Domain d2d6ma_: 2d6m A: [163594]
        automated match to d1a3ka_
        complexed with lbt
      2. 945385Domain d2d6mb_: 2d6m B: [163595]
        automated match to d1a3ka_
        complexed with lbt
    4. Domains for 2d6n:
      1. 945387Domain d2d6na_: 2d6n A: [163596]
        automated match to d1a3ka_
      2. 945388Domain d2d6nb_: 2d6n B: [163597]
        automated match to d1a3ka_
    5. Domain for 2d6o:
    6. Domains for 2d6p:
      1. 945393Domain d2d6pa_: 2d6p A: [163599]
        automated match to d1a3ka_
      2. 945394Domain d2d6pb_: 2d6p B: [163600]
        automated match to d1a3ka_
    7. Domain for 2dyc:
  8. 945395Rotavirus a [TaxId:10941] [187397] (1 PDB entry)
  9. 945404Sphingomonas sp. [188455] (2 PDB entries)
    1. Domain for 2z42:
    2. Domain for 2za9:
  10. 945407Sphingomonas sp. [TaxId:90322] [187577] (4 PDB entries)
    1. Domain for 2cws:
    2. Domain for 2zaa:
    3. Domain for 2zab:
    4. Domain for 2zac:
  11. 945412Tropaeolum majus [TaxId:4020] [187334] (3 PDB entries)
    1. Domains for 2uwa:
      1. 945413Domain d2uwaa_: 2uwa A: [168193]
        automated match to d1umza_
        complexed with gol
      2. 945414Domain d2uwab_: 2uwa B: [168194]
        automated match to d1umza_
        complexed with gol
      3. 945415Domain d2uwac_: 2uwa C: [168195]
        automated match to d1umza_
        complexed with gol
    2. Domains for 2uwb:
      1. 945416Domain d2uwba_: 2uwb A: [168196]
        automated match to d1umzb_
        mutant
      2. 945417Domain d2uwbb_: 2uwb B: [168197]
        automated match to d1umzb_
        mutant
    3. Domains for 2uwc:
      1. 945418Domain d2uwca_: 2uwc A: [168198]
        automated match to d1umza_
      2. 945419Domain d2uwcb_: 2uwc B: [168199]
        automated match to d1umza_

More info for Protein automated matches from b.29.1.0: automated matches

Timeline for Protein automated matches from b.29.1.0: automated matches: