SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families)
Family c.66.1.17: Spermidine synthase [69557] (3 proteins)
contains additional N-terminal tetramerisation all-beta domain, res. 1-71
Protein automated matches [190432] (5 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [189789] (1 PDB entry)
- Domains for 3rw9:
  1. Domain d3rw9a_: 3rw9 A: [185196]
    automated match to d2o05a1
    complexed with dsh
  2. Domain d3rw9b_: 3rw9 B: [185197]
    automated match to d2o05a1
    complexed with dsh
Nematode (Caenorhabditis elegans) [TaxId:6239] [187439] (1 PDB entry)
- Domain for 2b2c:
  - Domain d2b2cb_: 2b2c B: [127707]
    Other proteins in same PDB: d2b2ca1
    automated match to d2b2ca1
Pyrococcus horikoshii OT3 [TaxId:70601] [187326] (1 PDB entry)
- Domains for 2e5w:
  1. Domain d2e5wa_: 2e5w A: [163836]
    automated match to d1mjfa_
    complexed with act, ag3, mta
  2. Domain d2e5wb_: 2e5w B: [163837]
    automated match to d1mjfa_
    complexed with act, ag3, mta
  3. Domain d2e5wc_: 2e5w C: [163838]
    automated match to d1mjfa_
    complexed with act, ag3, mta
  4. Domain d2e5wd_: 2e5w D: [163839]
    automated match to d1mjfa_
    complexed with act, ag3, mta
Pyrococcus horikoshii [TaxId:53953] [188640] (1 PDB entry)
- Domains for 2zsu:
  1. Domain d2zsua_: 2zsu A: [171481]
    automated match to d1mjfa_
    complexed with ag3
  2. Domain d2zsub_: 2zsu B: [171482]
    automated match to d1mjfa_
    complexed with ag3
  3. Domain d2zsuc_: 2zsu C: [171483]
    automated match to d1mjfa_
    complexed with ag3
  4. Domain d2zsud_: 2zsu D: [171484]
    automated match to d1mjfa_
    complexed with ag3
  5. Domain d2zsue_: 2zsu E: [171485]
    automated match to d1mjfa_
    complexed with ag3
  6. Domain d2zsuf_: 2zsu F: [171486]
    automated match to d1mjfa_
    complexed with ag3
Thermus thermophilus HB8 [TaxId:300852] [189902] (1 PDB entry)
- Domains for 3anx:
  1. Domain d3anxa_: 3anx A: [172251]
    automated match to d1uirb_
    complexed with mta
  2. Domain d3anxb_: 3anx B: [172252]
    automated match to d1uirb_
    complexed with mta

More info for Protein automated matches from c.66.1.17: Spermidine synthase

Timeline for Protein automated matches from c.66.1.17: Spermidine synthase:

Protein automated matches from c.66.1.17: Spermidine synthase first appeared in SCOPe 2.01
Protein automated matches from c.66.1.17: Spermidine synthase appears in SCOPe 2.05
Protein automated matches from c.66.1.17: Spermidine synthase appears in SCOPe 2.07
Protein automated matches from c.66.1.17: Spermidine synthase appears in the current release, SCOPe 2.08