Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1681140Fold d.165: Ribosome inactivating proteins (RIP) [56370] (1 superfamily)
    contains mixed beta-sheet
  4. 1681141Superfamily d.165.1: Ribosome inactivating proteins (RIP) [56371] (3 families) (S)
  5. 1681142Family d.165.1.1: Plant cytotoxins [56372] (18 proteins)
  6. 1681285Protein automated matches [190420] (8 species)
    not a true protein

Species:

  1. 1681286Abrus precatorius [TaxId:3816] [189038] (1 PDB entry)
  2. 1681289Castor bean (Ricinus communis) [TaxId:3988] [188830] (7 PDB entries)
    1. Domain for 3ej5:
    2. Domain for 3px8:
    3. Domain for 3px9:
    4. Domains for 4lgp:
      1. 1681297Domain d4lgpa_: 4lgp A: [257021]
        automated match to d4hv3a_
        complexed with cl, edo
      2. 1681298Domain d4lgpc_: 4lgp C: [257835]
        automated match to d4hv3a_
        complexed with cl, edo
    5. Domain for 4lgr:
    6. Domain for 4lhj:
    7. Domains for 4lhq:
      1. 1681295Domain d4lhqa_: 4lhq A: [257025]
        automated match to d1br5a_
      2. 1681296Domain d4lhqc_: 4lhq C: [257837]
        automated match to d1br5a_
  3. 1681299Cushaw squash (Cucurbita moschata) [TaxId:3662] [188622] (1 PDB entry)
  4. 1681301European mistletoe (Viscum album) [TaxId:3972] [188629] (6 PDB entries)
    1. Domain for 2r9k:
    2. Domain for 2rg9:
    3. Domain for 3d7w:
    4. Domain for 3o5w:
    5. Domain for 4eb2:
    6. Domain for 4jkx:
  5. 1681308Momordica balsamina [TaxId:3672] [189375] (55 PDB entries)
    1. Domain for 3mrw:
    2. Domain for 3mry:
    3. Domain for 3my6:
    4. Domain for 3n1d:
    5. Domain for 3n1n:
    6. Domain for 3n2d:
    7. Domain for 3n31:
    8. Domain for 3n3x:
    9. Domain for 3n5d:
    10. Domain for 3nfm:
    11. Domain for 3njs:
    12. Domain for 3nx9:
    13. Domain for 3q4p:
    14. Domain for 3qji:
    15. Domain for 3rl9:
    16. Domain for 3s9q:
    17. Domain for 3sj6:
    18. Domain for 3u6t:
    19. Domain for 3u6z:
    20. Domain for 3u70:
    21. Domain for 3u8f:
    22. Domain for 3v14:
    23. Domain for 3v2k:
    24. Domain for 4dwm:
    25. Domain for 4emf:
    26. Domain for 4emr:
    27. Domain for 4f9n:
    28. Domain for 4fpz:
    29. Domain for 4fxa:
    30. Domain for 4fz9:
    31. Domain for 4g2x:
    32. Domain for 4guw:
    33. Domain for 4h0z:
    34. Domain for 4hoa:
    35. Domain for 4i47:
    36. Domain for 4jtb:
    37. Domain for 4jtp:
    38. Domain for 4k2z:
    39. Domain for 4k6p:
    40. Domain for 4k6q:
    41. Domain for 4k6s:
    42. Domain for 4kjh:
    43. Domain for 4kl4:
    44. Domain for 4kmk:
    45. Domain for 4kpv:
    46. Domain for 4kwn:
    47. Domain for 4l66:
    48. Domain for 4lro:
    49. Domain for 4lt4:
    50. Domain for 4lwx:
    51. Domain for 4m5a:
    52. Domain for 4o0o:
    53. Domain for 4o4q:
    54. Domain for 4o8e:
    55. Domain for 4q9f:
  6. 1681364Mongolian snake-gourd (Trichosanthes kirilowii) [TaxId:3677] [187299] (2 PDB entries)
    1. Domains for 2jdl:
      1. 1681365Domain d2jdla_: 2jdl A: [147987]
        automated match to d1gisa_
      2. 1681366Domain d2jdlb_: 2jdl B: [147988]
        automated match to d1gisa_
    2. Domains for 2vs6:
      1. 1681367Domain d2vs6a_: 2vs6 A: [168784]
        automated match to d1gisa_
      2. 1681368Domain d2vs6b_: 2vs6 B: [168785]
        automated match to d1gisa_
  7. 1681369Phytolacca acinosa [188469] (1 PDB entry)
  8. 1681371Phytolacca dioica [TaxId:29725] [188356] (6 PDB entries)
    1. Domain for 2qes:
    2. Domain for 2qet:
    3. Domain for 2z4u:
    4. Domain for 2z53:
    5. Domains for 3h5k:
      1. 1681376Domain d3h5ka_: 3h5k A: [177199]
        automated match to d1gika_
        complexed with edo, nag
      2. 1681377Domain d3h5kb_: 3h5k B: [177200]
        automated match to d1gika_
        complexed with edo, nag
    6. Domains for 3le7:
      1. 1681378Domain d3le7a_: 3le7 A: [180217]
        automated match to d1gika_
        complexed with ade, nag
      2. 1681379Domain d3le7b_: 3le7 B: [180218]
        automated match to d1gika_
        complexed with ade, nag

More info for Protein automated matches from d.165.1.1: Plant cytotoxins

Timeline for Protein automated matches from d.165.1.1: Plant cytotoxins: