Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1042202Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 1042203Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 1044054Family d.144.1.0: automated matches [191359] (1 protein)
    not a true family
  6. 1044055Protein automated matches [190417] (3 species)
    not a true protein

Species:

  1. 1044056Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187449] (9 PDB entries)
    1. Domain for 2b9f:
    2. Domain for 2b9h:
    3. Domain for 2b9i:
    4. Domain for 2b9j:
    5. Domains for 2f49:
      1. 1044059Domain d2f49a_: 2f49 A: [164267]
        automated match to d3erka_
        complexed with mg, scn
      2. 1044060Domain d2f49b_: 2f49 B: [164268]
        automated match to d3erka_
        complexed with mg, scn
    6. Domain for 2f9g:
    7. Domains for 2fa2:
      1. 1044064Domain d2fa2a_: 2fa2 A: [164305]
        automated match to d3erka_
        complexed with scn
      2. 1044065Domain d2fa2b_: 2fa2 B: [164306]
        automated match to d3erka_
        complexed with scn
    8. Domains for 2pk9:
      1. 1044066Domain d2pk9a_: 2pk9 A: [167204]
        automated match to d1e9hc_
        complexed with mes
      2. 1044067Domain d2pk9c_: 2pk9 C: [167205]
        automated match to d1e9hc_
        complexed with mes
    9. Domains for 2pmi:
      1. 1044068Domain d2pmia_: 2pmi A: [167217]
        automated match to d1e9hc_
        complexed with mes, sap
      2. 1044069Domain d2pmic_: 2pmi C: [167218]
        automated match to d1e9hc_
        complexed with mes, sap
  2. 1044070Human (Homo sapiens) [TaxId:9606] [187294] (40 PDB entries)
    1. Domain for 1yvj:
    2. Domains for 2a19:
      1. 1044118Domain d2a19b_: 2a19 B: [162646]
        automated match to d2java1
        complexed with anp, mg, po4
      2. 1044119Domain d2a19c_: 2a19 C: [162647]
        automated match to d2java1
        complexed with anp, mg, po4
    3. Domain for 2a1a:
    4. Domains for 2b7a:
      1. 1044083Domain d2b7aa_: 2b7a A: [162998]
        automated match to d1u46a_
        complexed with iza
      2. 1044084Domain d2b7ab_: 2b7a B: [162999]
        automated match to d1u46a_
        complexed with iza
    5. Domains for 2bva:
      1. 1044116Domain d2bvaa_: 2bva A: [163184]
        automated match to d1f3mc_
      2. 1044117Domain d2bvab_: 2bva B: [163185]
        automated match to d1f3mc_
    6. Domain for 2cdz:
    7. Domains for 2ivs:
      1. 1044080Domain d2ivsa_: 2ivs A: [165709]
        automated match to d1agwb_
        complexed with ack, fmt
      2. 1044081Domain d2ivsb_: 2ivs B: [165710]
        automated match to d1agwb_
        complexed with ack, fmt
    8. Domain for 2ivt:
    9. Domain for 2ivu:
    10. Domain for 2ivv:
    11. Domain for 2j0i:
    12. Domain for 2q0n:
    13. Domains for 2vn9:
      1. 1044095Domain d2vn9a_: 2vn9 A: [168728]
        automated match to d1a06a_
        complexed with cl, epe, gvd, po4
      2. 1044096Domain d2vn9b_: 2vn9 B: [168729]
        automated match to d1a06a_
        complexed with cl, epe, gvd, po4
    14. Domains for 2vz6:
      1. 1044088Domain d2vz6a_: 2vz6 A: [168957]
        automated match to d1a06a_
        complexed with fef, pgo
      2. 1044089Domain d2vz6b_: 2vz6 B: [168958]
        automated match to d1a06a_
        complexed with fef, pgo
    15. Domain for 2x2k:
    16. Domain for 2x2l:
    17. Domains for 2x2m:
      1. 1044107Domain d2x2ma_: 2x2m A: [169829]
        automated match to d1agwb_
        complexed with fmt, x2m
      2. 1044108Domain d2x2mb_: 2x2m B: [169830]
        automated match to d1agwb_
        complexed with fmt, x2m
    18. Domain for 2x4z:
    19. Domains for 2xa4:
      1. 1044086Domain d2xa4a_: 2xa4 A: [169971]
        automated match to d1u46b_
        complexed with az5
      2. 1044087Domain d2xa4b_: 2xa4 B: [169972]
        automated match to d1u46b_
        complexed with az5
    20. Domain for 3a8w:
    21. Domain for 3a8x:
    22. Domain for 3bhh:
    23. Domain for 3blq:
    24. Domain for 3blr:
    25. Domains for 3cok:
      1. 1044097Domain d3coka_: 3cok A: [173381]
        automated match to d1ol5a_
        complexed with anp, so4
      2. 1044098Domain d3cokb_: 3cok B: [173382]
        automated match to d1ol5a_
        complexed with anp, so4
    26. Domain for 3dtc:
    27. Domain for 3e62:
    28. Domain for 3e63:
    29. Domain for 3e64:
    30. Domains for 3fup:
      1. 1044099Domain d3fupa_: 3fup A: [176064]
        automated match to d1u46a_
        complexed with mi1
      2. 1044100Domain d3fupb_: 3fup B: [176065]
        automated match to d1u46a_
        complexed with mi1
    31. Domain for 3kmu:
    32. Domain for 3kmw:
    33. Domain for 3krr:
    34. Domain for 3lpb:
    35. Domain for 3nyx:
    36. Domain for 3nz0:
    37. Domains for 3q32:
      1. 1044103Domain d3q32a_: 3q32 A: [184178]
        automated match to d1u46a_
        complexed with j2i
      2. 1044104Domain d3q32b_: 3q32 B: [184179]
        automated match to d1u46a_
        complexed with j2i
    38. Domain for 3rep:
    39. Domains for 3tjc:
      1. 1044114Domain d3tjca_: 3tjc A: [185857]
        automated match to d1u46a_
        complexed with 0tp
      2. 1044115Domain d3tjcb_: 3tjc B: [185858]
        automated match to d1u46a_
        complexed with 0tp
    40. Domains for 3tjd:
      1. 1044122Domain d3tjda_: 3tjd A: [185859]
        automated match to d1u46a_
        complexed with 6tp
      2. 1044123Domain d3tjdb_: 3tjd B: [185860]
        automated match to d1u46a_
        complexed with 6tp
  3. 1044124Thale cress (Arabidopsis thaliana) [TaxId:3702] [188319] (1 PDB entry)

More info for Protein automated matches from d.144.1.0: automated matches

Timeline for Protein automated matches from d.144.1.0: automated matches: