Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2210472Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2211247Superfamily d.110.7: Roadblock/LC7 domain [103196] (1 family) (S)
    alpha-beta(2)-alpha-beta(3)-alpha; structurally most similar to the SNARE-like superfamily with a circular permutation of the terminal helices
  5. 2211248Family d.110.7.1: Roadblock/LC7 domain [103197] (5 proteins)
    Pfam PF03259
  6. 2211279Protein automated matches [190414] (3 species)
    not a true protein

Species:

  1. 2211280Fruit fly (Drosophila melanogaster) [TaxId:7227] [189327] (2 PDB entries)
    1. Domains for 3l7h:
      1. 2211281Domain d3l7ha_: 3l7h A: [180048]
        automated match to d1z09a1
      2. 2211282Domain d3l7hb_: 3l7h B: [180049]
        automated match to d1z09a1
      3. 2211283Domain d3l7hc_: 3l7h C: [180050]
        automated match to d1z09a1
      4. 2211284Domain d3l7hd_: 3l7h D: [180051]
        automated match to d1z09a1
    2. Domains for 3l9k:
      1. 2211285Domain d3l9ka_: 3l9k A: [247427]
        automated match to d3l7hb_
      2. 2211286Domain d3l9kb_: 3l9k B: [247428]
        automated match to d3l7hb_
      3. 2211287Domain d3l9kc_: 3l9k C: [247429]
        automated match to d3l7hb_
      4. 2211288Domain d3l9kd_: 3l9k D: [247430]
        automated match to d3l7hb_
  2. 2211289Human (Homo sapiens) [TaxId:9606] [187290] (9 PDB entries)
    1. Domain for 2b95:
    2. Domains for 2e8j:
      1. 2211307Domain d2e8ja_: 2e8j A: [146726]
        automated match to d2b95a1
      2. 2211308Domain d2e8jb_: 2e8j B: [146727]
        automated match to d2b95a1
    3. Domains for 2hz5:
      1. 2211292Domain d2hz5a_: 2hz5 A: [147460]
        automated match to d1tgqa_
        complexed with cs
      2. 2211293Domain d2hz5b_: 2hz5 B: [147461]
        automated match to d1tgqa_
        complexed with cs
    4. Domains for 5x6u:
      1. 2211298Domain d5x6ua1: 5x6u A:2-123 [342528]
        Other proteins in same PDB: d5x6ua2
        automated match to d1veta_
      2. 2211299Domain d5x6ub_: 5x6u B: [342532]
        Other proteins in same PDB: d5x6ua2
        automated match to d1szva_
    5. Domains for 5x6v:
      1. 2211294Domain d5x6va_: 5x6v A: [342568]
        automated match to d1veta_
        complexed with act, na
      2. 2211295Domain d5x6vb_: 5x6v B: [342544]
        automated match to d1szva_
        complexed with act, na
    6. Domains for 5y39:
      1. 2211300Domain d5y39b_: 5y39 B: [342625]
        automated match to d1szva_
      2. 2211301Domain d5y39c_: 5y39 C: [342638]
        automated match to d1veta_
      3. 2211302Domain d5y39g_: 5y39 G: [342613]
        automated match to d1szva_
      4. 2211303Domain d5y39h_: 5y39 H: [342607]
        automated match to d1veta_
    7. Domains for 6b9x:
      1. 2211290Domain d6b9xb1: 6b9x B:1-125 [341184]
        Other proteins in same PDB: d6b9xb2
        automated match to d1szva_
      2. 2211291Domain d6b9xc_: 6b9x C: [341181]
        Other proteins in same PDB: d6b9xb2
        automated match to d1veta_
    8. Domains for 6ehp:
      1. 2211296Domain d6ehpa_: 6ehp A: [339755]
        automated match to d1veta_
        complexed with cl
      2. 2211297Domain d6ehpb_: 6ehp B: [339756]
        automated match to d1szva_
        complexed with cl
    9. Domains for 6ehr:
      1. 2211304Domain d6ehra_: 6ehr A: [339753]
        automated match to d1veta_
      2. 2211305Domain d6ehrb_: 6ehr B: [339754]
        automated match to d1szva_
  3. 2211309Mouse (Mus musculus) [TaxId:10090] [254900] (1 PDB entry)

More info for Protein automated matches from d.110.7.1: Roadblock/LC7 domain

Timeline for Protein automated matches from d.110.7.1: Roadblock/LC7 domain: