Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2499233Fold d.9: IL8-like [54116] (2 superfamilies)
    beta(3)-alpha
  4. 2499234Superfamily d.9.1: Interleukin 8-like chemokines [54117] (2 families) (S)
    form dimers with different dimerisation modes
  5. 2499235Family d.9.1.1: Interleukin 8-like chemokines [54118] (25 protein domains)
  6. 2499552Protein automated matches [190403] (3 species)
    not a true protein

Species:

  1. 2499553Human (Homo sapiens) [TaxId:9606] [187277] (22 PDB entries)
    1. Domain for 2hdm:
    2. Domains for 2n54:
      1. 2499614Domain d2n54a_: 2n54 A: [277872]
        automated match to d1j9oa_
      2. 2499615Domain d2n54b_: 2n54 B: [277873]
        automated match to d1j9oa_
    3. Domains for 2nz1:
      1. 2499573Domain d2nz1d_: 2nz1 D: [148524]
        Other proteins in same PDB: d2nz1a_, d2nz1b_, d2nz1x_
        automated match to d1doma_
      2. 2499574Domain d2nz1e_: 2nz1 E: [148525]
        Other proteins in same PDB: d2nz1a_, d2nz1b_, d2nz1x_
        automated match to d1doma_
      3. 2499575Domain d2nz1y_: 2nz1 Y: [148527]
        Other proteins in same PDB: d2nz1a_, d2nz1b_, d2nz1x_
        automated match to d1doma_
    4. Domains for 2ra4:
      1. 2499554Domain d2ra4a_: 2ra4 A: [168029]
        automated match to d1doma_
        complexed with so4, tfa
      2. 2499555Domain d2ra4b_: 2ra4 B: [168030]
        automated match to d1doma_
        complexed with so4, tfa
    5. Domains for 2vxw:
      1. 2499556Domain d2vxwa1: 2vxw A:10-68 [168925]
        Other proteins in same PDB: d2vxwa2, d2vxwb2, d2vxwc2, d2vxwd2
        automated match to d1hrja_
      2. 2499557Domain d2vxwb1: 2vxw B:10-68 [168926]
        Other proteins in same PDB: d2vxwa2, d2vxwb2, d2vxwc2, d2vxwd2
        automated match to d1hrja_
      3. 2499558Domain d2vxwc1: 2vxw C:10-68 [168927]
        Other proteins in same PDB: d2vxwa2, d2vxwb2, d2vxwc2, d2vxwd2
        automated match to d1hrja_
      4. 2499559Domain d2vxwd1: 2vxw D:10-68 [168928]
        Other proteins in same PDB: d2vxwa2, d2vxwb2, d2vxwc2, d2vxwd2
        automated match to d1hrja_
    6. Domain for 3fpu:
    7. Domains for 3kbx:
      1. 2499576Domain d3kbxa_: 3kbx A: [179243]
        automated match to d1b50a_
        complexed with act, k
      2. 2499577Domain d3kbxb_: 3kbx B: [179244]
        automated match to d1b50a_
        complexed with act, k
      3. 2499578Domain d3kbxc_: 3kbx C: [179245]
        automated match to d1b50a_
        complexed with act, k
      4. 2499579Domain d3kbxd_: 3kbx D: [179246]
        automated match to d1b50a_
        complexed with act, k
      5. 2499580Domain d3kbxe_: 3kbx E: [179247]
        automated match to d1b50a_
        complexed with act, k
    8. Domain for 3ona:
    9. Domains for 3tn1:
      1. 2499592Domain d3tn1a1: 3tn1 A:3-69 [306564]
        Other proteins in same PDB: d3tn1a2, d3tn1b2, d3tn1d2, d3tn1e2
        automated match to d4ra8b_
        complexed with zn; mutant
      2. 2499593Domain d3tn1b1: 3tn1 B:3-69 [306566]
        Other proteins in same PDB: d3tn1a2, d3tn1b2, d3tn1d2, d3tn1e2
        automated match to d4ra8b_
        complexed with zn; mutant
      3. 2499594Domain d3tn1c_: 3tn1 C: [306568]
        Other proteins in same PDB: d3tn1a2, d3tn1b2, d3tn1d2, d3tn1e2
        automated match to d4ra8b_
        complexed with zn; mutant
      4. 2499595Domain d3tn1d1: 3tn1 D:3-69 [306569]
        Other proteins in same PDB: d3tn1a2, d3tn1b2, d3tn1d2, d3tn1e2
        automated match to d4ra8b_
        complexed with zn; mutant
      5. 2499596Domain d3tn1e1: 3tn1 E:3-69 [306571]
        Other proteins in same PDB: d3tn1a2, d3tn1b2, d3tn1d2, d3tn1e2
        automated match to d4ra8b_
        complexed with zn; mutant
    10. Domain for 3tn2:
    11. Domains for 4hsv:
      1. 2499563Domain d4hsva_: 4hsv A: [202466]
        automated match to d4hsvc_
      2. 2499564Domain d4hsvb_: 4hsv B: [202467]
        automated match to d4hsvc_
      3. 2499565Domain d4hsvc_: 4hsv C: [196784]
        automated match to d1f9qd_
      4. 2499566Domain d4hsvd_: 4hsv D: [202468]
        automated match to d4hsvc_
    12. Domains for 4r9w:
      1. 2499602Domain d4r9wa_: 4r9w A: [279930]
        automated match to d1f9qd_
        complexed with nto
      2. 2499603Domain d4r9wb_: 4r9w B: [279931]
        automated match to d1f9qd_
        complexed with nto
    13. Domains for 4ra8:
      1. 2499597Domain d4ra8a_: 4ra8 A: [260014]
        automated match to d1huna_
        mutant
      2. 2499598Domain d4ra8b_: 4ra8 B: [263837]
        mutant
      3. 2499599Domain d4ra8c_: 4ra8 C: [263838]
        mutant
      4. 2499600Domain d4ra8d_: 4ra8 D: [263839]
        mutant
      5. 2499601Domain d4ra8e_: 4ra8 E: [263840]
        mutant
    14. Domain for 4xt1:
    15. Domain for 4zk9:
    16. Domain for 4zkb:
    17. Domain for 4zkc:
    18. Domains for 5cor:
      1. 2499582Domain d5cora_: 5cor A: [315242]
        automated match to d4ra8b_
        complexed with act, hez
      2. 2499583Domain d5corb_: 5cor B: [315222]
        automated match to d4ra8b_
        complexed with act, hez
      3. 2499584Domain d5corc_: 5cor C: [315305]
        automated match to d4ra8b_
        complexed with act, hez
      4. 2499585Domain d5cord_: 5cor D: [315281]
        automated match to d4ra8b_
        complexed with act, hez
      5. 2499586Domain d5core_: 5cor E: [315225]
        automated match to d4ra8b_
        complexed with act, hez
      6. 2499587Domain d5corf_: 5cor F: [315223]
        automated match to d4ra8b_
        complexed with act, hez
      7. 2499588Domain d5corg_: 5cor G: [315221]
        automated match to d4ra8b_
        complexed with act, hez
      8. 2499589Domain d5corh_: 5cor H: [315571]
        automated match to d4ra8b_
        complexed with act, hez
      9. 2499590Domain d5cori_: 5cor I: [315257]
        automated match to d4ra8b_
        complexed with act, hez
      10. 2499591Domain d5corj_: 5cor J: [315266]
        automated match to d4ra8b_
        complexed with act, hez
    19. Domains for 5d65:
      1. 2499606Domain d5d65a_: 5d65 A: [316055]
        automated match to d4ra8b_
        complexed with bgc, cl, glc, ids, sgn
      2. 2499607Domain d5d65b_: 5d65 B: [316053]
        automated match to d4ra8b_
        complexed with bgc, cl, glc, ids, sgn
      3. 2499608Domain d5d65c_: 5d65 C: [316051]
        automated match to d4ra8b_
        complexed with bgc, cl, glc, ids, sgn
      4. 2499609Domain d5d65d_: 5d65 D: [316096]
        automated match to d4ra8b_
        complexed with bgc, cl, glc, ids, sgn
      5. 2499610Domain d5d65e_: 5d65 E: [316054]
        automated match to d4ra8b_
        complexed with bgc, cl, glc, ids, sgn
    20. Domain for 5ob5:
    21. Domains for 5ur7:
      1. 2499571Domain d5ur7a_: 5ur7 A: [341910]
        automated match to d1ha6a_
        complexed with act, ipa
      2. 2499572Domain d5ur7b_: 5ur7 B: [341909]
        automated match to d1ha6a_
        complexed with act, ipa
    22. Domains for 5wk3:
      1. 2499567Domain d5wk3a_: 5wk3 A: [343370]
        Other proteins in same PDB: d5wk3p1, d5wk3p2, d5wk3r1, d5wk3r2, d5wk3t1, d5wk3t2, d5wk3v1, d5wk3v2
        automated match to d1nr4e_
        complexed with gol
      2. 2499568Domain d5wk3b_: 5wk3 B: [343376]
        Other proteins in same PDB: d5wk3p1, d5wk3p2, d5wk3r1, d5wk3r2, d5wk3t1, d5wk3t2, d5wk3v1, d5wk3v2
        automated match to d1nr4e_
        complexed with gol
      3. 2499569Domain d5wk3c_: 5wk3 C: [343293]
        Other proteins in same PDB: d5wk3p1, d5wk3p2, d5wk3r1, d5wk3r2, d5wk3t1, d5wk3t2, d5wk3v1, d5wk3v2
        automated match to d1nr4e_
        complexed with gol
      4. 2499570Domain d5wk3d_: 5wk3 D: [343282]
        Other proteins in same PDB: d5wk3p1, d5wk3p2, d5wk3r1, d5wk3r2, d5wk3t1, d5wk3t2, d5wk3v1, d5wk3v2
        automated match to d1nr4e_
        complexed with gol
  2. 2499616Human herpesvirus 8 strain gk18 [TaxId:868565] [269363] (1 PDB entry)
  3. 2499618Mouse (Mus musculus) [TaxId:10090] [188560] (1 PDB entry)

More info for Protein automated matches from d.9.1.1: Interleukin 8-like chemokines

Timeline for Protein automated matches from d.9.1.1: Interleukin 8-like chemokines: