Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2481726Fold c.82: ALDH-like [53719] (1 superfamily)
    consists of two similar domains with 3 layers (a/b/a) each; duplication
    core: parallel beta-sheet of 5 strands, order 32145
  4. 2481727Superfamily c.82.1: ALDH-like [53720] (3 families) (S)
    binds NAD differently from other NAD(P)-dependent oxidoreductases
  5. 2481728Family c.82.1.1: ALDH-like [53721] (6 protein domains)
  6. 2482050Protein automated matches [190401] (5 species)
    not a true protein

Species:

  1. 2482051Human (Homo sapiens) [TaxId:9606] [189906] (22 PDB entries)
    1. Domains for 2vle:
      1. 2482064Domain d2vlea_: 2vle A: [153269]
        automated match to d1cw3a_
        complexed with dzn
      2. 2482065Domain d2vleb_: 2vle B: [153270]
        automated match to d1cw3a_
        complexed with dzn
      3. 2482066Domain d2vlec_: 2vle C: [153271]
        automated match to d1cw3a_
        complexed with dzn
      4. 2482067Domain d2vled_: 2vle D: [153272]
        automated match to d1cw3a_
        complexed with dzn
      5. 2482068Domain d2vlee_: 2vle E: [153273]
        automated match to d1cw3a_
        complexed with dzn
      6. 2482069Domain d2vlef_: 2vle F: [153274]
        automated match to d1cw3a_
        complexed with dzn
      7. 2482070Domain d2vleg_: 2vle G: [153275]
        automated match to d1cw3a_
        complexed with dzn
      8. 2482071Domain d2vleh_: 2vle H: [153276]
        automated match to d1cw3a_
        complexed with dzn
    2. Domains for 3sza:
      1. 2482052Domain d3szaa_: 3sza A: [185593]
        automated match to d1ad3a_
        complexed with act, k
      2. 2482053Domain d3szab_: 3sza B: [185594]
        automated match to d1ad3a_
        complexed with act, k
    3. Domains for 3szb:
      1. 2482054Domain d3szba_: 3szb A: [185595]
        automated match to d1ad3a_
        complexed with act, i1e, k
      2. 2482055Domain d3szbb_: 3szb B: [185596]
        automated match to d1ad3a_
        complexed with act, i1e, k
    4. Domains for 4h80:
      1. 2482089Domain d4h80a_: 4h80 A: [230029]
        automated match to d3szba_
        complexed with 04t
      2. 2482090Domain d4h80b_: 4h80 B: [230032]
        automated match to d3szba_
        complexed with 04t
      3. 2482091Domain d4h80c_: 4h80 C: [230030]
        automated match to d3szba_
        complexed with 04t
      4. 2482092Domain d4h80d_: 4h80 D: [230028]
        automated match to d3szba_
        complexed with 04t
      5. 2482093Domain d4h80e_: 4h80 E: [230034]
        automated match to d3szba_
        complexed with 04t
      6. 2482094Domain d4h80f_: 4h80 F: [230031]
        automated match to d3szba_
        complexed with 04t
      7. 2482095Domain d4h80g_: 4h80 G: [230033]
        automated match to d3szba_
        complexed with 04t
      8. 2482096Domain d4h80h_: 4h80 H: [230035]
        automated match to d3szba_
        complexed with 04t
    5. Domains for 4l1o:
      1. 2482077Domain d4l1oa_: 4l1o A: [256961]
        automated match to d3szab_
        complexed with 1vl, act, k
      2. 2482078Domain d4l1ob_: 4l1o B: [260891]
        automated match to d3szab_
        complexed with 1vl, act, k
    6. Domains for 4l2o:
      1. 2482060Domain d4l2oa_: 4l2o A: [236436]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      2. 2482061Domain d4l2ob_: 4l2o B: [236437]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      3. 2482062Domain d4l2oe_: 4l2o E: [236439]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      4. 2482063Domain d4l2og_: 4l2o G: [236438]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
    7. Domains for 4qgk:
      1. 2482074Domain d4qgka1: 4qgk A:1-460 [258359]
        Other proteins in same PDB: d4qgka2, d4qgkb2
        automated match to d3szaa_
      2. 2482075Domain d4qgkb1: 4qgk B:1-457 [263701]
        Other proteins in same PDB: d4qgka2, d4qgkb2
        automated match to d4qgka_
    8. Domain for 4wb9:
    9. Domain for 4wj9:
    10. Domain for 4wp7:
    11. Domain for 4wpn:
    12. Domains for 4x2q:
      1. 2482097Domain d4x2qa_: 4x2q A: [279762]
        automated match to d1ag8a_
        complexed with nad
      2. 2482098Domain d4x2qb_: 4x2q B: [279764]
        automated match to d1ag8a_
        complexed with nad
      3. 2482099Domain d4x2qc_: 4x2q C: [279760]
        automated match to d1ag8a_
        complexed with nad
      4. 2482100Domain d4x2qd_: 4x2q D: [279765]
        automated match to d1ag8a_
        complexed with nad
    13. Domain for 4x4l:
    14. Domain for 5ac2:
    15. Domain for 5l2m:
    16. Domain for 5l2n:
    17. Domains for 5l2o:
      1. 2482079Domain d5l2oa_: 5l2o A: [330743]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      2. 2482080Domain d5l2ob_: 5l2o B: [330788]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      3. 2482081Domain d5l2oc_: 5l2o C: [330719]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      4. 2482082Domain d5l2od_: 5l2o D: [330787]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      5. 2482083Domain d5l2oe_: 5l2o E: [330792]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      6. 2482084Domain d5l2of_: 5l2o F: [330737]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      7. 2482085Domain d5l2og_: 5l2o G: [330690]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      8. 2482086Domain d5l2oh_: 5l2o H: [330862]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
    18. Domain for 5tei:
    19. Domains for 6alj:
      1. 3049034Domain d6aljd_: 6alj D: [349096]
        automated match to d3n80a_
        complexed with cw2, nad
      2. 3049037Domain d6aljb_: 6alj B: [349099]
        automated match to d3n80a_
        complexed with cw2, nad
      3. 3049063Domain d6aljc_: 6alj C: [349125]
        automated match to d3n80a_
        complexed with cw2, nad
      4. 3049100Domain d6alja_: 6alj A: [349162]
        automated match to d3n80a_
        complexed with cw2, nad
    20. Domains for 6b5g:
      1. 3049355Domain d6b5gd_: 6b5g D: [349417]
        automated match to d3n80a_
        complexed with cqy, nad
      2. 3049372Domain d6b5gb_: 6b5g B: [349434]
        automated match to d3n80a_
        complexed with cqy, nad
      3. 3049436Domain d6b5gc_: 6b5g C: [349498]
        automated match to d3n80a_
        complexed with cqy, nad
      4. 3049450Domain d6b5ga_: 6b5g A: [349512]
        automated match to d3n80a_
        complexed with cqy, nad
    21. Domains for 6b5h:
      1. 3049378Domain d6b5hd_: 6b5h D: [349440]
        automated match to d3n80a_
        complexed with cu4, nad
      2. 3049394Domain d6b5hb_: 6b5h B: [349456]
        automated match to d3n80a_
        complexed with cu4, nad
      3. 3049395Domain d6b5hc_: 6b5h C: [349457]
        automated match to d3n80a_
        complexed with cu4, nad
      4. 3049406Domain d6b5ha_: 6b5h A: [349468]
        automated match to d3n80a_
        complexed with cu4, nad
    22. Domains for 6b5i:
      1. 3049382Domain d6b5ia_: 6b5i A: [349444]
        automated match to d3n80a_
        complexed with cu4
      2. 3049408Domain d6b5id_: 6b5i D: [349470]
        automated match to d3n80a_
        complexed with cu4
      3. 3049473Domain d6b5ib_: 6b5i B: [349535]
        automated match to d3n80a_
        complexed with cu4
      4. 3049517Domain d6b5ic_: 6b5i C: [349579]
        automated match to d3n80a_
        complexed with cu4
  2. 2482101Sheep (Ovis aries) [TaxId:9940] [276868] (1 PDB entry)
  3. 2482106Streptococcus mutans [TaxId:1309] [187673] (3 PDB entries)
    1. Domains for 2esd:
      1. 2482115Domain d2esda_: 2esd A: [164195]
        automated match to d1euha_
        complexed with g3h, nap
      2. 2482116Domain d2esdb_: 2esd B: [164196]
        automated match to d1euha_
        complexed with g3h, nap
      3. 2482117Domain d2esdc_: 2esd C: [164197]
        automated match to d1euha_
        complexed with g3h, nap
      4. 2482118Domain d2esdd_: 2esd D: [164198]
        automated match to d1euha_
        complexed with g3h, nap
    2. Domains for 2id2:
      1. 2482107Domain d2id2a_: 2id2 A: [165491]
        automated match to d1euha_
        complexed with nap, so4; mutant
      2. 2482108Domain d2id2b_: 2id2 B: [165492]
        automated match to d1euha_
        complexed with nap, so4; mutant
      3. 2482109Domain d2id2c_: 2id2 C: [165493]
        automated match to d1euha_
        complexed with nap, so4; mutant
      4. 2482110Domain d2id2d_: 2id2 D: [165494]
        automated match to d1euha_
        complexed with nap, so4; mutant
    3. Domains for 2qe0:
      1. 2482111Domain d2qe0a_: 2qe0 A: [167551]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      2. 2482112Domain d2qe0b_: 2qe0 B: [167552]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      3. 2482113Domain d2qe0c_: 2qe0 C: [167553]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      4. 2482114Domain d2qe0d_: 2qe0 D: [167554]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
  4. 2482119Thermus thermophilus HB8 [TaxId:300852] [187273] (15 PDB entries)
    1. Domains for 2bhp:
      1. 2482136Domain d2bhpa_: 2bhp A: [163085]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad
      2. 2482137Domain d2bhpb_: 2bhp B: [163086]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad
    2. Domains for 2bhq:
      1. 2482122Domain d2bhqa_: 2bhq A: [163087]
        automated match to d1uzba_
        complexed with act, glu, mpd, mrd
      2. 2482123Domain d2bhqb_: 2bhq B: [163088]
        automated match to d1uzba_
        complexed with act, glu, mpd, mrd
    3. Domains for 2bja:
      1. 2482144Domain d2bjaa_: 2bja A: [163092]
        automated match to d1uzba_
        complexed with act, cl, mpd, mrd, nad
      2. 2482145Domain d2bjab_: 2bja B: [163093]
        automated match to d1uzba_
        complexed with act, cl, mpd, mrd, nad
    4. Domains for 2bjk:
      1. 2482120Domain d2bjka_: 2bjk A: [163108]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, nad
      2. 2482121Domain d2bjkb_: 2bjk B: [163109]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, nad
    5. Domains for 2ehq:
      1. 2482124Domain d2ehqa_: 2ehq A: [164040]
        automated match to d1uzba_
        complexed with act, mpd, na, nap
      2. 2482125Domain d2ehqb_: 2ehq B: [164041]
        automated match to d1uzba_
        complexed with act, mpd, na, nap
    6. Domains for 2ehu:
      1. 2482132Domain d2ehua_: 2ehu A: [164044]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, ser
      2. 2482133Domain d2ehub_: 2ehu B: [164045]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, ser
    7. Domains for 2eii:
      1. 2482138Domain d2eiia_: 2eii A: [164048]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, val
      2. 2482139Domain d2eiib_: 2eii B: [164049]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, val
    8. Domains for 2eit:
      1. 2482130Domain d2eita_: 2eit A: [164057]
        automated match to d1uzba_
        complexed with act, ala, mpd, na, nad
      2. 2482131Domain d2eitb_: 2eit B: [164058]
        automated match to d1uzba_
        complexed with act, ala, mpd, na, nad
    9. Domains for 2eiw:
      1. 2482142Domain d2eiwa_: 2eiw A: [146868]
        automated match to d1uzba_
        complexed with act, mpd, na, pro
      2. 2482143Domain d2eiwb_: 2eiw B: [146869]
        automated match to d1uzba_
        complexed with act, mpd, na, pro
    10. Domains for 2ej6:
      1. 2482148Domain d2ej6a_: 2ej6 A: [164091]
        automated match to d1uzba_
        complexed with act, dpr, mpd, na
      2. 2482149Domain d2ej6b_: 2ej6 B: [164092]
        automated match to d1uzba_
        complexed with act, dpr, mpd, na
    11. Domains for 2ejd:
      1. 2482140Domain d2ejda_: 2ejd A: [164097]
        automated match to d1uzba_
        complexed with act, ala, mpd, na
      2. 2482141Domain d2ejdb_: 2ejd B: [164098]
        automated match to d1uzba_
        complexed with act, ala, mpd, na
    12. Domains for 2ejl:
      1. 2482126Domain d2ejla_: 2ejl A: [164103]
        automated match to d1uzba_
        complexed with act, mpd, na, ser
      2. 2482127Domain d2ejlb_: 2ejl B: [164104]
        automated match to d1uzba_
        complexed with act, mpd, na, ser
    13. Domains for 2iy6:
      1. 2482134Domain d2iy6a_: 2iy6 A: [165765]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, na
      2. 2482135Domain d2iy6b_: 2iy6 B: [165766]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, na
    14. Domains for 2j40:
      1. 2482146Domain d2j40a_: 2j40 A: [165858]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad, pro
      2. 2482147Domain d2j40b_: 2j40 B: [165859]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad, pro
    15. Domains for 2j5n:
      1. 2482128Domain d2j5na_: 2j5n A: [165911]
        automated match to d1uzba_
        complexed with act, gly, mpd, mrd, na, nad
      2. 2482129Domain d2j5nb_: 2j5n B: [165912]
        automated match to d1uzba_
        complexed with act, gly, mpd, mrd, na, nad
  5. 2482150Thermus thermophilus [TaxId:262724] [197417] (1 PDB entry)

More info for Protein automated matches from c.82.1.1: ALDH-like

Timeline for Protein automated matches from c.82.1.1: ALDH-like: