Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2140671Fold c.82: ALDH-like [53719] (1 superfamily)
    consists of two similar domains with 3 layers (a/b/a) each; duplication
    core: parallel beta-sheet of 5 strands, order 32145
  4. 2140672Superfamily c.82.1: ALDH-like [53720] (3 families) (S)
    binds NAD differently from other NAD(P)-dependent oxidoreductases
  5. 2140673Family c.82.1.1: ALDH-like [53721] (6 protein domains)
  6. 2140987Protein automated matches [190401] (5 species)
    not a true protein

Species:

  1. 2140988Human (Homo sapiens) [TaxId:9606] [189906] (18 PDB entries)
    1. Domains for 2vle:
      1. 2140999Domain d2vlea_: 2vle A: [153269]
        automated match to d1cw3a_
        complexed with dzn
      2. 2141000Domain d2vleb_: 2vle B: [153270]
        automated match to d1cw3a_
        complexed with dzn
      3. 2141001Domain d2vlec_: 2vle C: [153271]
        automated match to d1cw3a_
        complexed with dzn
      4. 2141002Domain d2vled_: 2vle D: [153272]
        automated match to d1cw3a_
        complexed with dzn
      5. 2141003Domain d2vlee_: 2vle E: [153273]
        automated match to d1cw3a_
        complexed with dzn
      6. 2141004Domain d2vlef_: 2vle F: [153274]
        automated match to d1cw3a_
        complexed with dzn
      7. 2141005Domain d2vleg_: 2vle G: [153275]
        automated match to d1cw3a_
        complexed with dzn
      8. 2141006Domain d2vleh_: 2vle H: [153276]
        automated match to d1cw3a_
        complexed with dzn
    2. Domains for 3sza:
      1. 2140989Domain d3szaa_: 3sza A: [185593]
        automated match to d1ad3a_
        complexed with act, k
      2. 2140990Domain d3szab_: 3sza B: [185594]
        automated match to d1ad3a_
        complexed with act, k
    3. Domains for 3szb:
      1. 2140991Domain d3szba_: 3szb A: [185595]
        automated match to d1ad3a_
        complexed with act, i1e, k
      2. 2140992Domain d3szbb_: 3szb B: [185596]
        automated match to d1ad3a_
        complexed with act, i1e, k
    4. Domains for 4h80:
      1. 2141015Domain d4h80a_: 4h80 A: [230029]
        automated match to d3szba_
        complexed with 04t
      2. 2141016Domain d4h80b_: 4h80 B: [230032]
        automated match to d3szba_
        complexed with 04t
      3. 2141017Domain d4h80c_: 4h80 C: [230030]
        automated match to d3szba_
        complexed with 04t
      4. 2141018Domain d4h80d_: 4h80 D: [230028]
        automated match to d3szba_
        complexed with 04t
      5. 2141019Domain d4h80e_: 4h80 E: [230034]
        automated match to d3szba_
        complexed with 04t
      6. 2141020Domain d4h80f_: 4h80 F: [230031]
        automated match to d3szba_
        complexed with 04t
      7. 2141021Domain d4h80g_: 4h80 G: [230033]
        automated match to d3szba_
        complexed with 04t
      8. 2141022Domain d4h80h_: 4h80 H: [230035]
        automated match to d3szba_
        complexed with 04t
    5. Domains for 4l1o:
      1. 2141012Domain d4l1oa_: 4l1o A: [256961]
        automated match to d3szab_
        complexed with 1vl, act, k
      2. 2141013Domain d4l1ob_: 4l1o B: [260891]
        automated match to d3szab_
        complexed with 1vl, act, k
    6. Domains for 4l2o:
      1. 2140995Domain d4l2oa_: 4l2o A: [236436]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      2. 2140996Domain d4l2ob_: 4l2o B: [236437]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      3. 2140997Domain d4l2oe_: 4l2o E: [236439]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
      4. 2140998Domain d4l2og_: 4l2o G: [236438]
        automated match to d3szba_
        complexed with 1dd, act, k, nad
    7. Domains for 4qgk:
      1. 2141009Domain d4qgka1: 4qgk A:1-460 [258359]
        Other proteins in same PDB: d4qgka2, d4qgkb2
        automated match to d3szaa_
      2. 2141010Domain d4qgkb1: 4qgk B:1-457 [263701]
        Other proteins in same PDB: d4qgka2, d4qgkb2
        automated match to d4qgka_
    8. Domain for 4wb9:
    9. Domain for 4wj9:
    10. Domain for 4wp7:
    11. Domain for 4wpn:
    12. Domains for 4x2q:
      1. 2141023Domain d4x2qa_: 4x2q A: [279762]
        automated match to d1ag8a_
        complexed with nad
      2. 2141024Domain d4x2qb_: 4x2q B: [279764]
        automated match to d1ag8a_
        complexed with nad
      3. 2141025Domain d4x2qc_: 4x2q C: [279760]
        automated match to d1ag8a_
        complexed with nad
      4. 2141026Domain d4x2qd_: 4x2q D: [279765]
        automated match to d1ag8a_
        complexed with nad
    13. Domain for 4x4l:
    14. Domain for 5ac2:
    15. Domain for 5l2m:
    16. Domain for 5l2n:
    17. Domains for 5l2o:
      1. 2287389Domain d5l2og_: 5l2o G: [330690]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      2. 2287418Domain d5l2oc_: 5l2o C: [330719]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      3. 2287436Domain d5l2of_: 5l2o F: [330737]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      4. 2287442Domain d5l2oa_: 5l2o A: [330743]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      5. 2287486Domain d5l2od_: 5l2o D: [330787]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      6. 2287487Domain d5l2ob_: 5l2o B: [330788]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      7. 2287491Domain d5l2oe_: 5l2o E: [330792]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
      8. 2287561Domain d5l2oh_: 5l2o H: [330862]
        automated match to d5ac2a_
        complexed with 6zw, cl, yb
    18. Domain for 5tei:
  2. 2141027Sheep (Ovis aries) [TaxId:9940] [276868] (1 PDB entry)
  3. 2141032Streptococcus mutans [TaxId:1309] [187673] (3 PDB entries)
    1. Domains for 2esd:
      1. 2141041Domain d2esda_: 2esd A: [164195]
        automated match to d1euha_
        complexed with g3h, nap
      2. 2141042Domain d2esdb_: 2esd B: [164196]
        automated match to d1euha_
        complexed with g3h, nap
      3. 2141043Domain d2esdc_: 2esd C: [164197]
        automated match to d1euha_
        complexed with g3h, nap
      4. 2141044Domain d2esdd_: 2esd D: [164198]
        automated match to d1euha_
        complexed with g3h, nap
    2. Domains for 2id2:
      1. 2141037Domain d2id2a_: 2id2 A: [165491]
        automated match to d1euha_
        complexed with nap, so4; mutant
      2. 2141038Domain d2id2b_: 2id2 B: [165492]
        automated match to d1euha_
        complexed with nap, so4; mutant
      3. 2141039Domain d2id2c_: 2id2 C: [165493]
        automated match to d1euha_
        complexed with nap, so4; mutant
      4. 2141040Domain d2id2d_: 2id2 D: [165494]
        automated match to d1euha_
        complexed with nap, so4; mutant
    3. Domains for 2qe0:
      1. 2141033Domain d2qe0a_: 2qe0 A: [167551]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      2. 2141034Domain d2qe0b_: 2qe0 B: [167552]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      3. 2141035Domain d2qe0c_: 2qe0 C: [167553]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
      4. 2141036Domain d2qe0d_: 2qe0 D: [167554]
        automated match to d1euha_
        protein/RNA complex; complexed with g3h, nap
  4. 2141045Thermus thermophilus HB8 [TaxId:300852] [187273] (15 PDB entries)
    1. Domains for 2bhp:
      1. 2141062Domain d2bhpa_: 2bhp A: [163085]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad
      2. 2141063Domain d2bhpb_: 2bhp B: [163086]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad
    2. Domains for 2bhq:
      1. 2141048Domain d2bhqa_: 2bhq A: [163087]
        automated match to d1uzba_
        complexed with act, glu, mpd, mrd
      2. 2141049Domain d2bhqb_: 2bhq B: [163088]
        automated match to d1uzba_
        complexed with act, glu, mpd, mrd
    3. Domains for 2bja:
      1. 2141070Domain d2bjaa_: 2bja A: [163092]
        automated match to d1uzba_
        complexed with act, cl, mpd, mrd, nad
      2. 2141071Domain d2bjab_: 2bja B: [163093]
        automated match to d1uzba_
        complexed with act, cl, mpd, mrd, nad
    4. Domains for 2bjk:
      1. 2141046Domain d2bjka_: 2bjk A: [163108]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, nad
      2. 2141047Domain d2bjkb_: 2bjk B: [163109]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, nad
    5. Domains for 2ehq:
      1. 2141050Domain d2ehqa_: 2ehq A: [164040]
        automated match to d1uzba_
        complexed with act, mpd, na, nap
      2. 2141051Domain d2ehqb_: 2ehq B: [164041]
        automated match to d1uzba_
        complexed with act, mpd, na, nap
    6. Domains for 2ehu:
      1. 2141058Domain d2ehua_: 2ehu A: [164044]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, ser
      2. 2141059Domain d2ehub_: 2ehu B: [164045]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, ser
    7. Domains for 2eii:
      1. 2141064Domain d2eiia_: 2eii A: [164048]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, val
      2. 2141065Domain d2eiib_: 2eii B: [164049]
        automated match to d1uzba_
        complexed with act, mpd, na, nad, val
    8. Domains for 2eit:
      1. 2141056Domain d2eita_: 2eit A: [164057]
        automated match to d1uzba_
        complexed with act, ala, mpd, na, nad
      2. 2141057Domain d2eitb_: 2eit B: [164058]
        automated match to d1uzba_
        complexed with act, ala, mpd, na, nad
    9. Domains for 2eiw:
      1. 2141068Domain d2eiwa_: 2eiw A: [146868]
        automated match to d1uzba_
        complexed with act, mpd, na, pro
      2. 2141069Domain d2eiwb_: 2eiw B: [146869]
        automated match to d1uzba_
        complexed with act, mpd, na, pro
    10. Domains for 2ej6:
      1. 2141074Domain d2ej6a_: 2ej6 A: [164091]
        automated match to d1uzba_
        complexed with act, dpr, mpd, na
      2. 2141075Domain d2ej6b_: 2ej6 B: [164092]
        automated match to d1uzba_
        complexed with act, dpr, mpd, na
    11. Domains for 2ejd:
      1. 2141066Domain d2ejda_: 2ejd A: [164097]
        automated match to d1uzba_
        complexed with act, ala, mpd, na
      2. 2141067Domain d2ejdb_: 2ejd B: [164098]
        automated match to d1uzba_
        complexed with act, ala, mpd, na
    12. Domains for 2ejl:
      1. 2141052Domain d2ejla_: 2ejl A: [164103]
        automated match to d1uzba_
        complexed with act, mpd, na, ser
      2. 2141053Domain d2ejlb_: 2ejl B: [164104]
        automated match to d1uzba_
        complexed with act, mpd, na, ser
    13. Domains for 2iy6:
      1. 2141060Domain d2iy6a_: 2iy6 A: [165765]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, na
      2. 2141061Domain d2iy6b_: 2iy6 B: [165766]
        automated match to d1uzba_
        complexed with cl, flc, mpd, mrd, na
    14. Domains for 2j40:
      1. 2141072Domain d2j40a_: 2j40 A: [165858]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad, pro
      2. 2141073Domain d2j40b_: 2j40 B: [165859]
        automated match to d1uzba_
        complexed with act, mpd, mrd, na, nad, pro
    15. Domains for 2j5n:
      1. 2141054Domain d2j5na_: 2j5n A: [165911]
        automated match to d1uzba_
        complexed with act, gly, mpd, mrd, na, nad
      2. 2141055Domain d2j5nb_: 2j5n B: [165912]
        automated match to d1uzba_
        complexed with act, gly, mpd, mrd, na, nad
  5. 2141076Thermus thermophilus [TaxId:262724] [197417] (1 PDB entry)

More info for Protein automated matches from c.82.1.1: ALDH-like

Timeline for Protein automated matches from c.82.1.1: ALDH-like: