Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1379866Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 1379867Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 1380298Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)
  6. 1380484Protein automated matches [190399] (4 species)
    not a true protein

Species:

  1. 1380485Human (Homo sapiens) [TaxId:9606] [189951] (3 PDB entries)
    1. Domains for 2yob:
      1. 1380486Domain d2yoba_: 2yob A: [231661]
        automated match to d2yobb_
        complexed with btb, gol, plp, so4
      2. 1380487Domain d2yobb_: 2yob B: [228745]
        automated match to d3kgwb_
        complexed with btb, gol, plp, so4
    2. Domains for 3r9a:
      1. 1380488Domain d3r9aa_: 3r9a A: [184855]
        Other proteins in same PDB: d3r9ab_, d3r9ad_
        automated match to d1h0ca_
        complexed with btb
      2. 1380489Domain d3r9ac_: 3r9a C: [184857]
        Other proteins in same PDB: d3r9ab_, d3r9ad_
        automated match to d1h0ca_
        complexed with btb
    3. Domains for 4i8a:
      1. 1380490Domain d4i8aa_: 4i8a A: [196965]
        automated match to d3r9ac_
        complexed with gol
      2. 1380491Domain d4i8ab_: 4i8a B: [202593]
        automated match to d4i8aa_
        complexed with gol
      3. 1380492Domain d4i8ac_: 4i8a C: [202594]
        automated match to d4i8aa_
        complexed with gol
      4. 1380493Domain d4i8ad_: 4i8a D: [202595]
        automated match to d4i8aa_
        complexed with gol
  2. 1380494Mouse (Mus musculus) [TaxId:10090] [189108] (2 PDB entries)
    1. Domains for 3kgw:
      1. 1380495Domain d3kgwa_: 3kgw A: [179364]
        automated match to d1h0ca_
        complexed with cl, edo, plp
      2. 1380496Domain d3kgwb_: 3kgw B: [179365]
        automated match to d1h0ca_
        complexed with cl, edo, plp
    2. Domains for 3kgx:
      1. 1380497Domain d3kgxa_: 3kgx A: [179366]
        automated match to d1h0ca_
        complexed with cl, edo, mg
      2. 1380498Domain d3kgxb_: 3kgx B: [179367]
        automated match to d1h0ca_
        complexed with cl, edo, mg
  3. 1380499Pseudomonas putida [TaxId:303] [187269] (4 PDB entries)
    1. Domains for 2o7c:
      1. 1380500Domain d2o7ca_: 2o7c A: [148663]
        automated match to d1pg8a_
        complexed with so4
      2. 1380501Domain d2o7cb_: 2o7c B: [148664]
        automated match to d1pg8a_
        complexed with so4
      3. 1380502Domain d2o7cc_: 2o7c C: [148665]
        automated match to d1pg8a_
        complexed with so4
      4. 1380503Domain d2o7cd_: 2o7c D: [148666]
        automated match to d1pg8a_
        complexed with so4
    2. Domains for 3vk2:
      1. 1380508Domain d3vk2a_: 3vk2 A: [194670]
        automated match to d1ukja_
        complexed with so4; mutant
      2. 1380509Domain d3vk2b_: 3vk2 B: [194669]
        automated match to d1ukja_
        complexed with so4; mutant
      3. 1380510Domain d3vk2c_: 3vk2 C: [194668]
        automated match to d1ukja_
        complexed with so4; mutant
      4. 1380511Domain d3vk2d_: 3vk2 D: [194671]
        automated match to d1ukja_
        complexed with so4; mutant
    3. Domains for 3vk3:
      1. 1380504Domain d3vk3a_: 3vk3 A: [194675]
        automated match to d1ukja_
        complexed with met; mutant
      2. 1380505Domain d3vk3b_: 3vk3 B: [194673]
        automated match to d1ukja_
        complexed with met; mutant
      3. 1380506Domain d3vk3c_: 3vk3 C: [194672]
        automated match to d1ukja_
        complexed with met; mutant
      4. 1380507Domain d3vk3d_: 3vk3 D: [194674]
        automated match to d1ukja_
        complexed with met; mutant
    4. Domains for 3vk4:
      1. 1380512Domain d3vk4a_: 3vk4 A: [194665]
        automated match to d1ukja_
        complexed with hcs; mutant
      2. 1380513Domain d3vk4b_: 3vk4 B: [194666]
        automated match to d1ukja_
        complexed with hcs; mutant
      3. 1380514Domain d3vk4c_: 3vk4 C: [194664]
        automated match to d1ukja_
        complexed with hcs; mutant
      4. 1380515Domain d3vk4d_: 3vk4 D: [194667]
        automated match to d1ukja_
        complexed with hcs; mutant
  4. 1380516Thermus thermophilus [TaxId:274] [187566] (1 PDB entry)

More info for Protein automated matches from c.67.1.3: Cystathionine synthase-like

Timeline for Protein automated matches from c.67.1.3: Cystathionine synthase-like: