Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2125386Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2126724Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) (S)
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
  5. 2126725Family c.56.5.1: Pancreatic carboxypeptidases [53188] (5 protein domains)
  6. 2126816Protein automated matches [190397] (2 species)
    not a true protein

Species:

  1. 2126817Human (Homo sapiens) [TaxId:9606] [188484] (5 PDB entries)
    1. Domains for 2v77:
      1. 2126819Domain d2v77a_: 2v77 A: [168367]
        automated match to d1pytb_
        complexed with epe, pay, zn
      2. 2126820Domain d2v77b_: 2v77 B: [168368]
        automated match to d1pytb_
        complexed with epe, pay, zn
    2. Domain for 3fju:
    3. Domains for 4uee:
      1. 2268236Domain d4ueeb_: 4uee B: [311542]
        automated match to d2v77a_
        complexed with la9, zn
      2. 2268370Domain d4ueea_: 4uee A: [311676]
        automated match to d2v77a_
        complexed with la9, zn
    4. Domains for 4uef:
      1. 2268238Domain d4uefa_: 4uef A: [311544]
        automated match to d2v77a_
        complexed with tje, zn
      2. 2268307Domain d4uefb_: 4uef B: [311613]
        automated match to d2v77a_
        complexed with tje, zn
    5. Domains for 4uez:
      1. 2268241Domain d4ueza_: 4uez A: [311547]
        automated match to d2v77a_
        complexed with lff, zn
      2. 2268454Domain d4uezb_: 4uez B: [311760]
        automated match to d2v77a_
        complexed with lff, zn
  2. 2126821Pig (Sus scrofa) [TaxId:9823] [187266] (26 PDB entries)
    1. Domains for 1z5r:
      1. 2126822Domain d1z5rb_: 1z5r B: [124489]
        Other proteins in same PDB: d1z5ra1
        automated match to d1z5ra1
        complexed with zn
      2. 2126823Domain d1z5rc_: 1z5r C: [124490]
        Other proteins in same PDB: d1z5ra1
        automated match to d1z5ra1
        complexed with zn
    2. Domains for 1zg7:
      1. 2126862Domain d1zg7a_: 1zg7 A: [125014]
        automated match to d1z5ra1
        complexed with p20, zn
      2. 2126863Domain d1zg7b_: 1zg7 B: [125015]
        automated match to d1z5ra1
        complexed with p20, zn
      3. 2126864Domain d1zg7c_: 1zg7 C: [125016]
        automated match to d1z5ra1
        complexed with p20, zn
    3. Domains for 1zg8:
      1. 2126873Domain d1zg8a_: 1zg8 A: [125017]
        automated match to d1z5ra1
        complexed with l98, zn
      2. 2126874Domain d1zg8b_: 1zg8 B: [125018]
        automated match to d1z5ra1
        complexed with l98, zn
      3. 2126875Domain d1zg8c_: 1zg8 C: [125019]
        automated match to d1z5ra1
        complexed with l98, zn
    4. Domains for 1zg9:
      1. 2126868Domain d1zg9a_: 1zg9 A: [125020]
        automated match to d1z5ra1
        complexed with l06, zn
      2. 2126869Domain d1zg9b_: 1zg9 B: [125021]
        automated match to d1z5ra1
        complexed with l06, zn
      3. 2126870Domain d1zg9c_: 1zg9 C: [125022]
        automated match to d1z5ra1
        complexed with l06, zn
    5. Domain for 2jew:
    6. Domains for 2piy:
      1. 2126824Domain d2piya_: 2piy A: [149522]
        automated match to d1z5ra1
        complexed with 528, zn
      2. 2126825Domain d2piyb_: 2piy B: [149523]
        automated match to d1z5ra1
        complexed with 528, zn
      3. 2126826Domain d2piyc_: 2piy C: [149524]
        automated match to d1z5ra1
        complexed with 528, zn
    7. Domains for 2piz:
      1. 2126855Domain d2piza_: 2piz A: [149525]
        automated match to d1z5ra1
        complexed with 606, zn
      2. 2126856Domain d2pizb_: 2piz B: [149526]
        automated match to d1z5ra1
        complexed with 606, zn
      3. 2126857Domain d2pizc_: 2piz C: [149527]
        automated match to d1z5ra1
        complexed with 606, zn
    8. Domains for 2pj0:
      1. 2126851Domain d2pj0a_: 2pj0 A: [149528]
        automated match to d1z5ra1
        complexed with 922, zn
      2. 2126852Domain d2pj0b_: 2pj0 B: [149529]
        automated match to d1z5ra1
        complexed with 922, zn
      3. 2126853Domain d2pj0c_: 2pj0 C: [149530]
        automated match to d1z5ra1
        complexed with 922, zn
    9. Domains for 2pj1:
      1. 2126829Domain d2pj1a_: 2pj1 A: [149531]
        automated match to d1z5ra1
        complexed with 578, zn
      2. 2126830Domain d2pj1b_: 2pj1 B: [149532]
        automated match to d1z5ra1
        complexed with 578, zn
      3. 2126831Domain d2pj1c_: 2pj1 C: [149533]
        automated match to d1z5ra1
        complexed with 578, zn
    10. Domains for 2pj2:
      1. 2126865Domain d2pj2a_: 2pj2 A: [149534]
        automated match to d1z5ra1
        complexed with 864, zn
      2. 2126866Domain d2pj2b_: 2pj2 B: [149535]
        automated match to d1z5ra1
        complexed with 864, zn
      3. 2126867Domain d2pj2c_: 2pj2 C: [149536]
        automated match to d1z5ra1
        complexed with 864, zn
    11. Domains for 2pj3:
      1. 2126835Domain d2pj3a_: 2pj3 A: [149537]
        automated match to d1z5ra1
        complexed with 86a, zn
      2. 2126836Domain d2pj3b_: 2pj3 B: [149538]
        automated match to d1z5ra1
        complexed with 86a, zn
      3. 2126837Domain d2pj3c_: 2pj3 C: [149539]
        automated match to d1z5ra1
        complexed with 86a, zn
    12. Domains for 2pj4:
      1. 2126871Domain d2pj4a_: 2pj4 A: [149540]
        automated match to d1z5ra1
        complexed with 414, zn
      2. 2126872Domain d2pj4b_: 2pj4 B: [149541]
        automated match to d1z5ra1
        complexed with 414, zn
    13. Domains for 2pj5:
      1. 2126832Domain d2pj5a_: 2pj5 A: [149542]
        automated match to d1z5ra1
        complexed with 11b, zn
      2. 2126833Domain d2pj5b_: 2pj5 B: [149543]
        automated match to d1z5ra1
        complexed with 11b, zn
      3. 2126834Domain d2pj5c_: 2pj5 C: [149544]
        automated match to d1z5ra1
        complexed with 11b, zn
    14. Domain for 2pj6:
    15. Domains for 2pj7:
      1. 2126858Domain d2pj7a_: 2pj7 A: [149546]
        automated match to d1z5ra1
        complexed with 235, zn
      2. 2126859Domain d2pj7b_: 2pj7 B: [149547]
        automated match to d1z5ra1
        complexed with 235, zn
      3. 2126860Domain d2pj7c_: 2pj7 C: [149548]
        automated match to d1z5ra1
        complexed with 235, zn
    16. Domains for 2pj8:
      1. 2126842Domain d2pj8a_: 2pj8 A: [149549]
        automated match to d1z5ra1
        complexed with 17a, zn
      2. 2126843Domain d2pj8b_: 2pj8 B: [149550]
        automated match to d1z5ra1
        complexed with 17a, zn
      3. 2126844Domain d2pj8c_: 2pj8 C: [149551]
        automated match to d1z5ra1
        complexed with 17a, zn
    17. Domain for 2pj9:
    18. Domains for 2pja:
      1. 2126845Domain d2pjaa_: 2pja A: [149553]
        automated match to d1z5ra1
        complexed with 33z, zn
      2. 2126846Domain d2pjab_: 2pja B: [149554]
        automated match to d1z5ra1
        complexed with 33z, zn
      3. 2126847Domain d2pjac_: 2pja C: [149555]
        automated match to d1z5ra1
        complexed with 33z, zn
    19. Domains for 2pjb:
      1. 2126839Domain d2pjba_: 2pjb A: [149556]
        automated match to d1z5ra1
        complexed with 983, zn
      2. 2126840Domain d2pjbb_: 2pjb B: [149557]
        automated match to d1z5ra1
        complexed with 983, zn
      3. 2126841Domain d2pjbc_: 2pjb C: [149558]
        automated match to d1z5ra1
        complexed with 983, zn
    20. Domains for 2pjc:
      1. 2126848Domain d2pjca_: 2pjc A: [149559]
        automated match to d1z5ra1
        complexed with 343, zn
      2. 2126849Domain d2pjcb_: 2pjc B: [149560]
        automated match to d1z5ra1
        complexed with 343, zn
      3. 2126850Domain d2pjcc_: 2pjc C: [149561]
        automated match to d1z5ra1
        complexed with 343, zn
    21. Domain for 3glj:
    22. Domain for 4z65:
    23. Domain for 5lyd:
    24. Domain for 5lyf:
    25. Domain for 5lyi:
    26. Domain for 5lyl:

More info for Protein automated matches from c.56.5.1: Pancreatic carboxypeptidases

Timeline for Protein automated matches from c.56.5.1: Pancreatic carboxypeptidases: