SCOPe 2.01: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.01
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
consists of one domain of this fold
Family c.55.3.0: automated matches [191357] (1 protein)
not a true family
Protein automated matches [190396] (2 species)
not a true protein

Species:

Mouse (Mus musculus) [TaxId:10090] [187264] (5 PDB entries)
1. Domain for 2ioc:
  - Domain d2iocb_: 2ioc B: [147743]
    Other proteins in same PDB: d2ioca1
    automated match to d1y97a1
    complexed with d5m, mn
2. Domains for 2o4g:
  1. Domain d2o4gb_: 2o4g B: [148585]
    Other proteins in same PDB: d2o4ga1
    automated match to d1y97a1
    protein/DNA complex; complexed with mg, tmp
  2. Domain d2o4gc_: 2o4g C: [148586]
    Other proteins in same PDB: d2o4ga1
    automated match to d1y97a1
    protein/DNA complex; complexed with mg, tmp
  3. Domain d2o4gd_: 2o4g D: [148587]
    Other proteins in same PDB: d2o4ga1
    automated match to d1y97a1
    protein/DNA complex; complexed with mg, tmp
3. Domains for 2oa8:
  1. Domain d2oa8a_: 2oa8 A: [148693]
    automated match to d1y97a1
    protein/DNA complex; complexed with ca
  2. Domain d2oa8b_: 2oa8 B: [148694]
    automated match to d1y97a1
    protein/DNA complex; complexed with ca
4. Domains for 3b6o:
  1. Domain d3b6oa_: 3b6o A: [154901]
    automated match to d1y97a1
    protein/DNA complex; complexed with li, tmp
  2. Domain d3b6ob_: 3b6o B: [154902]
    automated match to d1y97a1
    protein/DNA complex; complexed with li, tmp
  3. Domain d3b6oc_: 3b6o C: [154903]
    automated match to d1y97a1
    protein/DNA complex; complexed with li, tmp
  4. Domain d3b6od_: 3b6o D: [154904]
    automated match to d1y97a1
    protein/DNA complex; complexed with li, tmp
5. Domains for 3b6p:
  1. Domain d3b6pa_: 3b6p A: [154905]
    automated match to d1y97a1
    protein/DNA complex; complexed with na, tmp, zn
  2. Domain d3b6pb_: 3b6p B: [154906]
    automated match to d1y97a1
    protein/DNA complex; complexed with na, tmp, zn
  3. Domain d3b6pc_: 3b6p C: [154907]
    automated match to d1y97a1
    protein/DNA complex; complexed with na, tmp, zn
  4. Domain d3b6pd_: 3b6p D: [154908]
    automated match to d1y97a1
    protein/DNA complex; complexed with na, tmp, zn
Xanthomonas campestris pv. campestris [TaxId:340] [187742] (1 PDB entry)
- Domain for 2gbz:
  - Domain d2gbza_: 2gbz A: [164664]
    automated match to d1ytaa1
    complexed with mg

More info for Protein automated matches from c.55.3.0: automated matches

Timeline for Protein automated matches from c.55.3.0: automated matches:

Protein automated matches from c.55.3.0: automated matches is new in SCOPe 2.01-stable
Protein automated matches from c.55.3.0: automated matches appears in SCOPe 2.02
Protein automated matches from c.55.3.0: automated matches appears in the current release, SCOPe 2.08