Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1793083Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 1793084Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 1795288Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (4 proteins)
  6. 1795471Protein automated matches [190384] (12 species)
    not a true protein

Species:

  1. 1795472Coxsackievirus b3 [TaxId:103903] [188647] (1 PDB entry)
  2. 1795474Enterovirus a71 [TaxId:39054] [279546] (1 PDB entry)
  3. 1795476Foot-and-mouth disease virus (strain a10-61) [TaxId:12112] [187901] (1 PDB entry)
  4. 1795478Foot-and-mouth disease virus [TaxId:12110] [187460] (1 PDB entry)
  5. 1795480Foot-and-mouth disease virus [TaxId:12112] [189099] (2 PDB entries)
    1. Domains for 2wv4:
      1. 1795481Domain d2wv4a_: 2wv4 A: [169651]
        automated match to d2j92a1
      2. 1795482Domain d2wv4b_: 2wv4 B: [169652]
        automated match to d2j92a1
    2. Domains for 2wv5:
      1. 1795483Domain d2wv5a_: 2wv5 A: [169653]
        automated match to d2j92a1
      2. 1795484Domain d2wv5b_: 2wv5 B: [169654]
        automated match to d2j92a1
      3. 1795485Domain d2wv5c_: 2wv5 C: [169655]
        automated match to d2j92a1
      4. 1795486Domain d2wv5d_: 2wv5 D: [169656]
        automated match to d2j92a1
  6. 1795487Human coxsackievirus B3 [TaxId:12072] [188738] (7 PDB entries)
    1. Domain for 2ztx:
    2. Domain for 2zty:
    3. Domains for 2ztz:
      1. 1795492Domain d2ztza_: 2ztz A: [171521]
        automated match to d1l1na_
      2. 1795493Domain d2ztzb_: 2ztz B: [171522]
        automated match to d1l1na_
    4. Domains for 2zu1:
      1. 1795488Domain d2zu1a_: 2zu1 A: [198813]
        automated match to d2zu1b_
        mutant
      2. 1795489Domain d2zu1b_: 2zu1 B: [196614]
        automated match to d2vb0a_
        mutant
    5. Domain for 3zyd:
    6. Domain for 3zye:
    7. Domain for 3zz6:
  7. 1795497Human coxsackievirus [TaxId:12072] [188739] (11 PDB entries)
    1. Domain for 2zu3:
    2. Domains for 3zz3:
      1. 1795501Domain d3zz3a_: 3zz3 A: [194661]
        automated match to d2vb0a_
        mutant
      2. 1795502Domain d3zz3b_: 3zz3 B: [194660]
        automated match to d2vb0a_
        mutant
    3. Domains for 3zz4:
      1. 1795508Domain d3zz4a_: 3zz4 A: [194659]
        automated match to d2vb0a_
        mutant
      2. 1795509Domain d3zz4b_: 3zz4 B: [194658]
        automated match to d2vb0a_
        mutant
    4. Domain for 3zz5:
    5. Domain for 3zz7:
    6. Domain for 3zz8:
    7. Domain for 3zz9:
    8. Domain for 3zza:
    9. Domain for 3zzb:
    10. Domain for 3zzc:
    11. Domain for 3zzd:
  8. 1795511Human enterovirus [TaxId:42789] [196804] (9 PDB entries)
    1. Domain for 3zv8:
    2. Domain for 3zv9:
    3. Domain for 3zva:
    4. Domain for 3zvb:
    5. Domain for 3zvc:
    6. Domain for 3zvd:
    7. Domain for 3zve:
    8. Domain for 3zvf:
    9. Domain for 3zvg:
  9. 1795521Human poliovirus 1 [TaxId:12081] [193776] (1 PDB entry)
  10. 1795523Human sars coronavirus [TaxId:227859] [187234] (1 PDB entry)
  11. 1795526Rhinovirus c [TaxId:463676] [255484] (1 PDB entry)
  12. 1795528SARS coronavirus [TaxId:227859] [187411] (12 PDB entries)
    1. Domains for 1wof:
      1. 1795531Domain d1wofa_: 1wof A: [161971]
        automated match to d1uj1b_
        complexed with i12
      2. 1795532Domain d1wofb_: 1wof B: [161972]
        automated match to d1uj1b_
        complexed with i12
    2. Domains for 2amd:
      1. 1795529Domain d2amda_: 2amd A: [162828]
        automated match to d1uj1b_
        complexed with 9in
      2. 1795530Domain d2amdb_: 2amd B: [162829]
        automated match to d1uj1b_
        complexed with 9in
    3. Domains for 2amq:
      1. 1795534Domain d2amqa_: 2amq A: [162832]
        automated match to d1uj1b_
        complexed with 3ih
      2. 1795535Domain d2amqb_: 2amq B: [162833]
        automated match to d1uj1b_
        complexed with 3ih
    4. Domains for 2d2d:
      1. 1795548Domain d2d2da_: 2d2d A: [163557]
        automated match to d1uj1b_
        complexed with enb
      2. 1795549Domain d2d2db_: 2d2d B: [163558]
        automated match to d1uj1b_
        complexed with enb
    5. Domains for 2yy4:
      1. 1795536Domain d2yy4a_: 2yy4 A: [170921]
        automated match to d1uj1b_
      2. 1795537Domain d2yy4b_: 2yy4 B: [170922]
        automated match to d1uj1b_
    6. Domains for 3e91:
      1. 1795539Domain d3e91a_: 3e91 A: [174764]
        automated match to d1uj1b_
        mutant
      2. 1795540Domain d3e91b_: 3e91 B: [174765]
        automated match to d1uj1b_
        mutant
    7. Domains for 3ea7:
      1. 1795541Domain d3ea7a_: 3ea7 A: [174793]
        automated match to d1uj1b_
        mutant
      2. 1795542Domain d3ea7b_: 3ea7 B: [174794]
        automated match to d1uj1b_
        mutant
    8. Domain for 3ea8:
    9. Domain for 3ea9:
    10. Domains for 3eaj:
      1. 1795543Domain d3eaja_: 3eaj A: [174805]
        automated match to d1uj1b_
        mutant
      2. 1795544Domain d3eajb_: 3eaj B: [174806]
        automated match to d1uj1b_
        mutant
    11. Domain for 3m3t:
    12. Domains for 3m3v:
      1. 1795545Domain d3m3va_: 3m3v A: [180807]
        automated match to d1uj1b_
        mutant
      2. 1795546Domain d3m3vb_: 3m3v B: [180808]
        automated match to d1uj1b_
        mutant

More info for Protein automated matches from b.47.1.4: Viral cysteine protease of trypsin fold

Timeline for Protein automated matches from b.47.1.4: Viral cysteine protease of trypsin fold: