Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2788203Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  5. 2788204Family b.40.2.1: Bacterial AB5 toxins, B-subunits [50204] (7 proteins)
  6. 2788746Protein automated matches [190381] (11 species)
    not a true protein

Species:

  1. 2788747Bordetella pertussis [TaxId:520] [386828] (1 PDB entry)
  2. 2788758Citrobacter freundii [TaxId:546] [189098] (1 PDB entry)
  3. 2788769Enterobacteria phage [TaxId:10730] [350541] (1 PDB entry)
  4. 2788775Escherichia coli O157:H7 [TaxId:83334] [189598] (1 PDB entry)
  5. 2788786Escherichia coli [TaxId:562] [187229] (8 PDB entries)
    1. Domains for 2o2l:
      1. 2788832Domain d2o2ld_: 2o2l D: [148554]
        automated match to d1b44d_
      2. 2788833Domain d2o2le_: 2o2l E: [148555]
        automated match to d1b44d_
      3. 2788834Domain d2o2lf_: 2o2l F: [148556]
        automated match to d1b44d_
      4. 2788835Domain d2o2lg_: 2o2l G: [148557]
        automated match to d1b44d_
      5. 2788836Domain d2o2lh_: 2o2l H: [148558]
        automated match to d1b44d_
      6. 2788837Domain d2o2li_: 2o2l I: [148559]
        automated match to d1b44d_
      7. 2788838Domain d2o2lj_: 2o2l J: [148560]
        automated match to d1b44d_
      8. 2788839Domain d2o2lk_: 2o2l K: [148561]
        automated match to d1b44d_
      9. 2788840Domain d2o2ll_: 2o2l L: [148562]
        automated match to d1b44d_
      10. 2788841Domain d2o2lm_: 2o2l M: [148563]
        automated match to d1b44d_
    2. Domains for 4fnf:
      1. 2788812Domain d4fnfa_: 4fnf A: [202065]
        automated match to d4fnfe_
        complexed with act; mutant
      2. 2788813Domain d4fnfb_: 4fnf B: [202066]
        automated match to d4fnfe_
        complexed with act; mutant
      3. 2788814Domain d4fnfc_: 4fnf C: [202067]
        automated match to d4fnfe_
        complexed with act; mutant
      4. 2788815Domain d4fnfd_: 4fnf D: [202068]
        automated match to d4fnfe_
        complexed with act; mutant
      5. 2788816Domain d4fnfe_: 4fnf E: [193370]
        automated match to d1qb5d_
        complexed with act; mutant
      6. 2788817Domain d4fnff_: 4fnf F: [202069]
        automated match to d4fnfe_
        complexed with act; mutant
      7. 2788818Domain d4fnfg_: 4fnf G: [202070]
        automated match to d4fnfe_
        complexed with act; mutant
      8. 2788819Domain d4fnfh_: 4fnf H: [202071]
        automated match to d4fnfe_
        complexed with act; mutant
      9. 2788820Domain d4fnfi_: 4fnf I: [202072]
        automated match to d4fnfe_
        complexed with act; mutant
      10. 2788821Domain d4fnfj_: 4fnf J: [202073]
        automated match to d4fnfe_
        complexed with act; mutant
    3. Domains for 4fo2:
      1. 2788787Domain d4fo2a_: 4fo2 A: [202074]
        automated match to d4fo2j_
        complexed with act, na; mutant
      2. 2788788Domain d4fo2b_: 4fo2 B: [202075]
        automated match to d4fo2j_
        complexed with act, na; mutant
      3. 2788789Domain d4fo2c_: 4fo2 C: [202076]
        automated match to d4fo2j_
        complexed with act, na; mutant
      4. 2788790Domain d4fo2d_: 4fo2 D: [202077]
        automated match to d4fo2j_
        complexed with act, na; mutant
      5. 2788791Domain d4fo2e_: 4fo2 E: [202078]
        automated match to d4fo2j_
        complexed with act, na; mutant
      6. 2788792Domain d4fo2f_: 4fo2 F: [202079]
        automated match to d4fo2j_
        complexed with act, na; mutant
      7. 2788793Domain d4fo2g_: 4fo2 G: [202080]
        automated match to d4fo2j_
        complexed with act, na; mutant
      8. 2788794Domain d4fo2h_: 4fo2 H: [202081]
        automated match to d4fo2j_
        complexed with act, na; mutant
      9. 2788795Domain d4fo2i_: 4fo2 I: [202082]
        automated match to d4fo2j_
        complexed with act, na; mutant
      10. 2788796Domain d4fo2j_: 4fo2 J: [193369]
        automated match to d1qb5d_
        complexed with act, na; mutant
      11. 2788797Domain d4fo2k_: 4fo2 K: [202083]
        automated match to d4fo2j_
        complexed with act, na; mutant
      12. 2788798Domain d4fo2l_: 4fo2 L: [202084]
        automated match to d4fo2j_
        complexed with act, na; mutant
      13. 2788799Domain d4fo2m_: 4fo2 M: [202085]
        automated match to d4fo2j_
        complexed with act, na; mutant
      14. 2788800Domain d4fo2n_: 4fo2 N: [202086]
        automated match to d4fo2j_
        complexed with act, na; mutant
      15. 2788801Domain d4fo2o_: 4fo2 O: [202087]
        automated match to d4fo2j_
        complexed with act, na; mutant
      16. 2788802Domain d4fo2p_: 4fo2 P: [202088]
        automated match to d4fo2j_
        complexed with act, na; mutant
      17. 2788803Domain d4fo2q_: 4fo2 Q: [202089]
        automated match to d4fo2j_
        complexed with act, na; mutant
      18. 2788804Domain d4fo2r_: 4fo2 R: [202090]
        automated match to d4fo2j_
        complexed with act, na; mutant
      19. 2788805Domain d4fo2s_: 4fo2 S: [202091]
        automated match to d4fo2j_
        complexed with act, na; mutant
      20. 2788806Domain d4fo2t_: 4fo2 T: [202092]
        automated match to d4fo2j_
        complexed with act, na; mutant
    4. Domains for 4fp5:
      1. 2788807Domain d4fp5d_: 4fp5 D: [194306]
        automated match to d1tiid_
        complexed with so4; mutant
      2. 2788808Domain d4fp5e_: 4fp5 E: [194305]
        automated match to d1tiid_
        complexed with so4; mutant
      3. 2788809Domain d4fp5f_: 4fp5 F: [194304]
        automated match to d1tiid_
        complexed with so4; mutant
      4. 2788810Domain d4fp5g_: 4fp5 G: [194303]
        automated match to d1tiid_
        complexed with so4; mutant
      5. 2788811Domain d4fp5h_: 4fp5 H: [194302]
        automated match to d1tiid_
        complexed with so4; mutant
    5. Domains for 4l63:
      1. 2788822Domain d4l63b1: 4l63 B:0-103 [235280]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      2. 2788823Domain d4l63c1: 4l63 C:0-103 [235279]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      3. 2788824Domain d4l63d1: 4l63 D:0-103 [235281]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      4. 2788825Domain d4l63e1: 4l63 E:1-103 [235283]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      5. 2788826Domain d4l63f_: 4l63 F: [235282]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
    6. Domains for 4l6t:
      1. 2788827Domain d4l6tb1: 4l6t B:22-125 [228793]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d1jr0d_
        complexed with zn
      2. 2788828Domain d4l6tc1: 4l6t C:22-125 [235292]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
      3. 2788829Domain d4l6td1: 4l6t D:22-125 [228794]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d1jr0d_
        complexed with zn
      4. 2788830Domain d4l6te1: 4l6t E:22-125 [235295]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
      5. 2788831Domain d4l6tf1: 4l6t F:22-125 [235296]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
    7. Domains for 4p2c:
      1. 2788852Domain d4p2cb_: 4p2c B: [258076]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      2. 2788853Domain d4p2cc_: 4p2c C: [258077]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      3. 2788854Domain d4p2cd_: 4p2c D: [258976]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      4. 2788855Domain d4p2ce_: 4p2c E: [263420]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d4p2cb_
      5. 2788856Domain d4p2cf_: 4p2c F: [259908]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
    8. Domains for 6u3u:
      1. 2788842Domain d6u3uc_: 6u3u C: [388642]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      2. 2788843Domain d6u3ud_: 6u3u D: [388663]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      3. 2788844Domain d6u3ue_: 6u3u E: [388641]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      4. 2788845Domain d6u3uf_: 6u3u F: [388630]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      5. 2788846Domain d6u3ug_: 6u3u G: [388629]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      6. 2788847Domain d6u3uh_: 6u3u H: [388652]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      7. 2788848Domain d6u3ui_: 6u3u I: [388626]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      8. 2788849Domain d6u3uj_: 6u3u J: [388659]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      9. 2788850Domain d6u3uk_: 6u3u K: [388643]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
      10. 2788851Domain d6u3ul_: 6u3u L: [388633]
        Other proteins in same PDB: d6u3ua_, d6u3ub_
        automated match to d2ga4b_
        complexed with edo, epe, zn
  6. 2788857Escherichia coli [TaxId:634468] [322555] (1 PDB entry)
  7. 2788861Vibrio cholerae [346239] (1 PDB entry)
  8. 2788866Vibrio cholerae [TaxId:127906] [313688] (2 PDB entries)
    1. Domains for 5ele:
      1. 2788867Domain d5elea_: 5ele A: [313783]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      2. 2788868Domain d5eleb_: 5ele B: [313809]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      3. 2788869Domain d5elec_: 5ele C: [313833]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      4. 2788870Domain d5eled_: 5ele D: [313779]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      5. 2788871Domain d5elee_: 5ele E: [313689]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      6. 2788872Domain d5elef_: 5ele F: [313807]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      7. 2788873Domain d5eleg_: 5ele G: [313728]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      8. 2788874Domain d5eleh_: 5ele H: [313709]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      9. 2788875Domain d5elei_: 5ele I: [313727]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
      10. 2788876Domain d5elej_: 5ele J: [313802]
        automated match to d1jr0d_
        complexed with 1pe, bcn, ca, fuc, nag
    2. Domains for 6hsv:
      1. 2788877Domain d6hsva_: 6hsv A: [367447]
        automated match to d5elea_
        complexed with cl, mpd, po4
      2. 2788878Domain d6hsvc_: 6hsv C: [367445]
        automated match to d5elea_
        complexed with cl, mpd, po4
      3. 2788879Domain d6hsvd_: 6hsv D: [367462]
        automated match to d5elea_
        complexed with cl, mpd, po4
      4. 2788880Domain d6hsvh_: 6hsv H: [367441]
        automated match to d5elea_
        complexed with cl, mpd, po4
      5. 2788881Domain d6hsvi_: 6hsv I: [367452]
        automated match to d5elea_
        complexed with cl, mpd, po4
      6. 2788882Domain d6hsvk_: 6hsv K: [367489]
        automated match to d5elea_
        complexed with cl, mpd, po4
      7. 2788883Domain d6hsvq_: 6hsv Q: [367437]
        automated match to d5elea_
        complexed with cl, mpd, po4
      8. 2788884Domain d6hsvr_: 6hsv R: [367457]
        automated match to d5elea_
        complexed with cl, mpd, po4
      9. 2788885Domain d6hsvs_: 6hsv S: [367516]
        automated match to d5elea_
        complexed with cl, mpd, po4
      10. 2788886Domain d6hsvt_: 6hsv T: [367461]
        automated match to d5elea_
        complexed with cl, mpd, po4
  9. 2788887Vibrio cholerae [TaxId:243277] [313678] (4 PDB entries)
    1. Domains for 5elc:
      1. 2788898Domain d5elca_: 5elc A: [313737]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      2. 2788899Domain d5elcb_: 5elc B: [313736]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      3. 2788900Domain d5elcc_: 5elc C: [313725]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      4. 2788901Domain d5elcd_: 5elc D: [313788]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      5. 2788902Domain d5elce_: 5elc E: [313738]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      6. 2788903Domain d5elcf_: 5elc F: [313762]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      7. 2788904Domain d5elcg_: 5elc G: [313753]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      8. 2788905Domain d5elch_: 5elc H: [313761]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      9. 2788906Domain d5elci_: 5elc I: [313757]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
      10. 2788907Domain d5elcj_: 5elc J: [313724]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc
    2. Domains for 5elf:
      1. 2788908Domain d5elfa_: 5elf A: [313716]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      2. 2788909Domain d5elfb_: 5elf B: [313846]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      3. 2788910Domain d5elfc_: 5elf C: [313759]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      4. 2788911Domain d5elfd_: 5elf D: [313679]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      5. 2788912Domain d5elfe_: 5elf E: [313696]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      6. 2788913Domain d5elff_: 5elf F: [313735]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      7. 2788914Domain d5elfg_: 5elf G: [313743]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      8. 2788915Domain d5elfh_: 5elf H: [313732]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      9. 2788916Domain d5elfi_: 5elf I: [313774]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
      10. 2788917Domain d5elfj_: 5elf J: [313731]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, glc, pg4
    3. Domains for 5lzg:
      1. 2788888Domain d5lzga_: 5lzg A: [334899]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      2. 2788889Domain d5lzgb_: 5lzg B: [334848]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      3. 2788890Domain d5lzgc_: 5lzg C: [334957]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      4. 2788891Domain d5lzgd_: 5lzg D: [334878]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      5. 2788892Domain d5lzge_: 5lzg E: [334832]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
    4. Domains for 5lzj:
      1. 2788893Domain d5lzja_: 5lzj A: [334860]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      2. 2788894Domain d5lzjb_: 5lzj B: [334857]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      3. 2788895Domain d5lzjc_: 5lzj C: [334843]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      4. 2788896Domain d5lzjd_: 5lzj D: [334849]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      5. 2788897Domain d5lzje_: 5lzj E: [334884]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
  10. 2788918Vibrio cholerae [TaxId:37965] [187230] (2 PDB entries)
    1. Domains for 1tl0:
      1. 2788919Domain d1tl0f_: 1tl0 F: [303094]
        automated match to d1djrd_
      2. 2788920Domain d1tl0g_: 1tl0 G: [303095]
        automated match to d1djrd_
      3. 2788921Domain d1tl0h_: 1tl0 H: [303096]
        automated match to d1djrd_
      4. 2788922Domain d1tl0i_: 1tl0 I: [303097]
        automated match to d1djrd_
      5. 2788923Domain d1tl0j_: 1tl0 J: [303098]
        automated match to d1djrd_
      6. 2788924Domain d1tl0k_: 1tl0 K: [303099]
        automated match to d1djrd_
    2. Domains for 3efx:
      1. 2788925Domain d3efxe_: 3efx E: [158135]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      2. 2788926Domain d3efxf_: 3efx F: [158136]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      3. 2788927Domain d3efxg_: 3efx G: [158137]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      4. 2788928Domain d3efxh_: 3efx H: [158138]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      5. 2788929Domain d3efxi_: 3efx I: [158139]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      6. 2788930Domain d3efxj_: 3efx J: [158140]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      7. 2788931Domain d3efxk_: 3efx K: [158141]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      8. 2788932Domain d3efxl_: 3efx L: [158142]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      9. 2788933Domain d3efxm_: 3efx M: [158143]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
  11. 2788934Vibrio cholerae [TaxId:666] [311230] (2 PDB entries)
    1. Domains for 2nzg:
      1. 2788935Domain d2nzgd_: 2nzg D: [304242]
        automated match to d1djrd_
      2. 2788936Domain d2nzge_: 2nzg E: [304243]
        automated match to d1djrd_
      3. 2788937Domain d2nzgf_: 2nzg F: [304244]
        automated match to d1djrd_
      4. 2788938Domain d2nzgg_: 2nzg G: [304245]
        automated match to d1djrd_
      5. 2788939Domain d2nzgh_: 2nzg H: [304246]
        automated match to d1djrd_
      6. 2788940Domain d2nzgi_: 2nzg I: [304247]
        automated match to d1djrd_
      7. 2788941Domain d2nzgk_: 2nzg K: [304248]
        automated match to d1djrd_
      8. 2788942Domain d2nzgl_: 2nzg L: [304249]
        automated match to d1djrd_
      9. 2788943Domain d2nzgm_: 2nzg M: [304250]
        automated match to d1djrd_
    2. Domain for 6hsv:

More info for Protein automated matches from b.40.2.1: Bacterial AB5 toxins, B-subunits

Timeline for Protein automated matches from b.40.2.1: Bacterial AB5 toxins, B-subunits: