Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2050241Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  5. 2050242Family b.40.2.1: Bacterial AB5 toxins, B-subunits [50204] (7 protein domains)
  6. 2050706Protein automated matches [190381] (8 species)
    not a true protein

Species:

  1. 2050707Citrobacter freundii [TaxId:546] [189098] (1 PDB entry)
  2. 2050718Escherichia coli O157:H7 [TaxId:83334] [189598] (1 PDB entry)
  3. 2050729Escherichia coli [TaxId:562] [187229] (7 PDB entries)
    1. Domains for 2o2l:
      1. 2050775Domain d2o2ld_: 2o2l D: [148554]
        automated match to d1b44d_
      2. 2050776Domain d2o2le_: 2o2l E: [148555]
        automated match to d1b44d_
      3. 2050777Domain d2o2lf_: 2o2l F: [148556]
        automated match to d1b44d_
      4. 2050778Domain d2o2lg_: 2o2l G: [148557]
        automated match to d1b44d_
      5. 2050779Domain d2o2lh_: 2o2l H: [148558]
        automated match to d1b44d_
      6. 2050780Domain d2o2li_: 2o2l I: [148559]
        automated match to d1b44d_
      7. 2050781Domain d2o2lj_: 2o2l J: [148560]
        automated match to d1b44d_
      8. 2050782Domain d2o2lk_: 2o2l K: [148561]
        automated match to d1b44d_
      9. 2050783Domain d2o2ll_: 2o2l L: [148562]
        automated match to d1b44d_
      10. 2050784Domain d2o2lm_: 2o2l M: [148563]
        automated match to d1b44d_
    2. Domains for 4fnf:
      1. 2050755Domain d4fnfa_: 4fnf A: [202065]
        automated match to d4fnfe_
        complexed with act; mutant
      2. 2050756Domain d4fnfb_: 4fnf B: [202066]
        automated match to d4fnfe_
        complexed with act; mutant
      3. 2050757Domain d4fnfc_: 4fnf C: [202067]
        automated match to d4fnfe_
        complexed with act; mutant
      4. 2050758Domain d4fnfd_: 4fnf D: [202068]
        automated match to d4fnfe_
        complexed with act; mutant
      5. 2050759Domain d4fnfe_: 4fnf E: [193370]
        automated match to d1qb5d_
        complexed with act; mutant
      6. 2050760Domain d4fnff_: 4fnf F: [202069]
        automated match to d4fnfe_
        complexed with act; mutant
      7. 2050761Domain d4fnfg_: 4fnf G: [202070]
        automated match to d4fnfe_
        complexed with act; mutant
      8. 2050762Domain d4fnfh_: 4fnf H: [202071]
        automated match to d4fnfe_
        complexed with act; mutant
      9. 2050763Domain d4fnfi_: 4fnf I: [202072]
        automated match to d4fnfe_
        complexed with act; mutant
      10. 2050764Domain d4fnfj_: 4fnf J: [202073]
        automated match to d4fnfe_
        complexed with act; mutant
    3. Domains for 4fo2:
      1. 2050735Domain d4fo2a_: 4fo2 A: [202074]
        automated match to d4fo2j_
        complexed with act, na; mutant
      2. 2050736Domain d4fo2b_: 4fo2 B: [202075]
        automated match to d4fo2j_
        complexed with act, na; mutant
      3. 2050737Domain d4fo2c_: 4fo2 C: [202076]
        automated match to d4fo2j_
        complexed with act, na; mutant
      4. 2050738Domain d4fo2d_: 4fo2 D: [202077]
        automated match to d4fo2j_
        complexed with act, na; mutant
      5. 2050739Domain d4fo2e_: 4fo2 E: [202078]
        automated match to d4fo2j_
        complexed with act, na; mutant
      6. 2050740Domain d4fo2f_: 4fo2 F: [202079]
        automated match to d4fo2j_
        complexed with act, na; mutant
      7. 2050741Domain d4fo2g_: 4fo2 G: [202080]
        automated match to d4fo2j_
        complexed with act, na; mutant
      8. 2050742Domain d4fo2h_: 4fo2 H: [202081]
        automated match to d4fo2j_
        complexed with act, na; mutant
      9. 2050743Domain d4fo2i_: 4fo2 I: [202082]
        automated match to d4fo2j_
        complexed with act, na; mutant
      10. 2050744Domain d4fo2j_: 4fo2 J: [193369]
        automated match to d1qb5d_
        complexed with act, na; mutant
      11. 2050745Domain d4fo2k_: 4fo2 K: [202083]
        automated match to d4fo2j_
        complexed with act, na; mutant
      12. 2050746Domain d4fo2l_: 4fo2 L: [202084]
        automated match to d4fo2j_
        complexed with act, na; mutant
      13. 2050747Domain d4fo2m_: 4fo2 M: [202085]
        automated match to d4fo2j_
        complexed with act, na; mutant
      14. 2050748Domain d4fo2n_: 4fo2 N: [202086]
        automated match to d4fo2j_
        complexed with act, na; mutant
      15. 2050749Domain d4fo2o_: 4fo2 O: [202087]
        automated match to d4fo2j_
        complexed with act, na; mutant
      16. 2050750Domain d4fo2p_: 4fo2 P: [202088]
        automated match to d4fo2j_
        complexed with act, na; mutant
      17. 2050751Domain d4fo2q_: 4fo2 Q: [202089]
        automated match to d4fo2j_
        complexed with act, na; mutant
      18. 2050752Domain d4fo2r_: 4fo2 R: [202090]
        automated match to d4fo2j_
        complexed with act, na; mutant
      19. 2050753Domain d4fo2s_: 4fo2 S: [202091]
        automated match to d4fo2j_
        complexed with act, na; mutant
      20. 2050754Domain d4fo2t_: 4fo2 T: [202092]
        automated match to d4fo2j_
        complexed with act, na; mutant
    4. Domains for 4fp5:
      1. 2050730Domain d4fp5d_: 4fp5 D: [194306]
        automated match to d1tiid_
        complexed with so4; mutant
      2. 2050731Domain d4fp5e_: 4fp5 E: [194305]
        automated match to d1tiid_
        complexed with so4; mutant
      3. 2050732Domain d4fp5f_: 4fp5 F: [194304]
        automated match to d1tiid_
        complexed with so4; mutant
      4. 2050733Domain d4fp5g_: 4fp5 G: [194303]
        automated match to d1tiid_
        complexed with so4; mutant
      5. 2050734Domain d4fp5h_: 4fp5 H: [194302]
        automated match to d1tiid_
        complexed with so4; mutant
    5. Domains for 4l63:
      1. 2050765Domain d4l63b1: 4l63 B:0-103 [235280]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      2. 2050766Domain d4l63c1: 4l63 C:0-103 [235279]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      3. 2050767Domain d4l63d1: 4l63 D:0-103 [235281]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      4. 2050768Domain d4l63e1: 4l63 E:1-103 [235283]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
      5. 2050769Domain d4l63f_: 4l63 F: [235282]
        Other proteins in same PDB: d4l63b2, d4l63c2, d4l63d2, d4l63e2
        automated match to d4l6tb_
        complexed with epe, zn
    6. Domains for 4l6t:
      1. 2050770Domain d4l6tb1: 4l6t B:22-125 [228793]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d1jr0d_
        complexed with zn
      2. 2050771Domain d4l6tc1: 4l6t C:22-125 [235292]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
      3. 2050772Domain d4l6td1: 4l6t D:22-125 [228794]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d1jr0d_
        complexed with zn
      4. 2050773Domain d4l6te1: 4l6t E:22-125 [235295]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
      5. 2050774Domain d4l6tf1: 4l6t F:22-125 [235296]
        Other proteins in same PDB: d4l6tb2, d4l6tc2, d4l6td2, d4l6te2, d4l6tf2
        automated match to d4l6tb_
        complexed with zn
    7. Domains for 4p2c:
      1. 2050785Domain d4p2cb_: 4p2c B: [258076]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      2. 2050786Domain d4p2cc_: 4p2c C: [258077]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      3. 2050787Domain d4p2cd_: 4p2c D: [258976]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
      4. 2050788Domain d4p2ce_: 4p2c E: [263420]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d4p2cb_
      5. 2050789Domain d4p2cf_: 4p2c F: [259908]
        Other proteins in same PDB: d4p2ca_, d4p2cg_, d4p2ch_, d4p2ci_, d4p2cj1, d4p2cj2, d4p2ck_
        automated match to d2bosa_
  4. 2050790Vibrio cholerae [TaxId:37965] [187230] (2 PDB entries)
    1. Domains for 1tl0:
      1. 2050791Domain d1tl0f_: 1tl0 F: [303094]
        automated match to d1djrd_
      2. 2050792Domain d1tl0g_: 1tl0 G: [303095]
        automated match to d1djrd_
      3. 2050793Domain d1tl0h_: 1tl0 H: [303096]
        automated match to d1djrd_
      4. 2050794Domain d1tl0i_: 1tl0 I: [303097]
        automated match to d1djrd_
      5. 2050795Domain d1tl0j_: 1tl0 J: [303098]
        automated match to d1djrd_
      6. 2050796Domain d1tl0k_: 1tl0 K: [303099]
        automated match to d1djrd_
    2. Domains for 3efx:
      1. 2050797Domain d3efxe_: 3efx E: [158135]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      2. 2050798Domain d3efxf_: 3efx F: [158136]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      3. 2050799Domain d3efxg_: 3efx G: [158137]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      4. 2050800Domain d3efxh_: 3efx H: [158138]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      5. 2050801Domain d3efxi_: 3efx I: [158139]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      6. 2050802Domain d3efxj_: 3efx J: [158140]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      7. 2050803Domain d3efxk_: 3efx K: [158141]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      8. 2050804Domain d3efxl_: 3efx L: [158142]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
      9. 2050805Domain d3efxm_: 3efx M: [158143]
        Other proteins in same PDB: d3efxd1
        automated match to d1eeid_
  5. 2050806Vibrio cholerae [TaxId:666] [311230] (1 PDB entry)
  6. 2270373Vibrio cholerae [TaxId:243277] [313678] (4 PDB entries)
    1. Domains for 5elc:
      1. 2270419Domain d5elcj_: 5elc J: [313724]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      2. 2270420Domain d5elcc_: 5elc C: [313725]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      3. 2270431Domain d5elcb_: 5elc B: [313736]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      4. 2270432Domain d5elca_: 5elc A: [313737]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      5. 2270433Domain d5elce_: 5elc E: [313738]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      6. 2270448Domain d5elcg_: 5elc G: [313753]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      7. 2270452Domain d5elci_: 5elc I: [313757]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      8. 2270456Domain d5elch_: 5elc H: [313761]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      9. 2270457Domain d5elcf_: 5elc F: [313762]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
      10. 2270483Domain d5elcd_: 5elc D: [313788]
        automated match to d1jr0d_
        complexed with bcn, ca, fuc, gal, nag, ndg
    2. Domains for 5elf:
      1. 2270374Domain d5elfd_: 5elf D: [313679]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      2. 2270391Domain d5elfe_: 5elf E: [313696]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      3. 2270411Domain d5elfa_: 5elf A: [313716]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      4. 2270426Domain d5elfj_: 5elf J: [313731]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      5. 2270427Domain d5elfh_: 5elf H: [313732]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      6. 2270430Domain d5elff_: 5elf F: [313735]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      7. 2270438Domain d5elfg_: 5elf G: [313743]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      8. 2270454Domain d5elfc_: 5elf C: [313759]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      9. 2270469Domain d5elfi_: 5elf I: [313774]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
      10. 2270541Domain d5elfb_: 5elf B: [313846]
        automated match to d1jr0d_
        complexed with a2g, bcn, bgc, ca, fuc, gal, glc, pg4
    3. Domains for 5lzg:
      1. 2291531Domain d5lzge_: 5lzg E: [334832]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      2. 2291547Domain d5lzgb_: 5lzg B: [334848]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      3. 2291577Domain d5lzgd_: 5lzg D: [334878]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      4. 2291598Domain d5lzga_: 5lzg A: [334899]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
      5. 2291656Domain d5lzgc_: 5lzg C: [334957]
        automated match to d5elfd_
        complexed with 7bn, imd, mrd, peg, trs
    4. Domains for 5lzj:
      1. 2291542Domain d5lzjc_: 5lzj C: [334843]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      2. 2291548Domain d5lzjd_: 5lzj D: [334849]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      3. 2291556Domain d5lzjb_: 5lzj B: [334857]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      4. 2291559Domain d5lzja_: 5lzj A: [334860]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
      5. 2291583Domain d5lzje_: 5lzj E: [334884]
        automated match to d5elfd_
        complexed with 7bt, peg, pge, so4
  7. 2270383Vibrio cholerae [TaxId:127906] [313688] (1 PDB entry)
  8. 2279254Escherichia coli [TaxId:634468] [322555] (1 PDB entry)

More info for Protein automated matches from b.40.2.1: Bacterial AB5 toxins, B-subunits

Timeline for Protein automated matches from b.40.2.1: Bacterial AB5 toxins, B-subunits: