Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2043221Family b.29.1.4: Laminin G-like module [49944] (7 protein domains)
  6. 2043303Protein automated matches [190380] (2 species)
    not a true protein

Species:

  1. 2043304Mouse (Mus musculus) [TaxId:10090] [188387] (8 PDB entries)
    1. Domain for 3bod:
    2. Domains for 3bop:
      1. 2043311Domain d3bopa1: 3bop A:87-260 [245387]
        Other proteins in same PDB: d3bopa2, d3bopc2
        automated match to d3mw3a_
      2. 2043312Domain d3bopb_: 3bop B: [262265]
        Other proteins in same PDB: d3bopa2, d3bopc2
        automated match to d3bopa_
      3. 2043313Domain d3bopc1: 3bop C:87-260 [245388]
        Other proteins in same PDB: d3bopa2, d3bopc2
        automated match to d3mw3a_
    3. Domains for 3mw2:
      1. 2043309Domain d3mw2a1: 3mw2 A:86-288 [181623]
        Other proteins in same PDB: d3mw2a2, d3mw2b2
        automated match to d1c4ra_
        complexed with po4
      2. 2043310Domain d3mw2b1: 3mw2 B:86-288 [181624]
        Other proteins in same PDB: d3mw2a2, d3mw2b2
        automated match to d1c4ra_
        complexed with po4
    4. Domains for 3mw4:
      1. 2043306Domain d3mw4a1: 3mw4 A:83-256 [181626]
        Other proteins in same PDB: d3mw4a2, d3mw4b2, d3mw4c2
        automated match to d3b3qe1
        complexed with ca, so4
      2. 2043307Domain d3mw4b1: 3mw4 B:83-256 [181627]
        Other proteins in same PDB: d3mw4a2, d3mw4b2, d3mw4c2
        automated match to d3b3qe1
        complexed with ca, so4
      3. 2043308Domain d3mw4c1: 3mw4 C:83-256 [181628]
        Other proteins in same PDB: d3mw4a2, d3mw4b2, d3mw4c2
        automated match to d3b3qe1
        complexed with ca, so4
    5. Domains for 5ik4:
      1. 2277812Domain d5ik4a1: 5ik4 A:2740-2932 [321113]
        automated match to d1dyka1
        complexed with a2g, ca, gol, nag
      2. 2277813Domain d5ik4a2: 5ik4 A:2933-3118 [321114]
        automated match to d1okqa2
        complexed with a2g, ca, gol, nag
    6. Domains for 5ik5:
      1. 2277796Domain d5ik5a1: 5ik5 A:2740-2932 [321097]
        automated match to d1dyka1
        complexed with 4mu, a2g, bdp, ca, gal, gol, nag, xys
      2. 2277797Domain d5ik5a2: 5ik5 A:2933-3118 [321098]
        automated match to d1okqa2
        complexed with 4mu, a2g, bdp, ca, gal, gol, nag, xys
    7. Domains for 5ik7:
      1. 2277724Domain d5ik7b1: 5ik7 B:2742-2932 [321025]
        Other proteins in same PDB: d5ik7a3, d5ik7b3
        automated match to d1dyka1
        complexed with ca, edo, flc, nag
      2. 2277725Domain d5ik7b2: 5ik7 B:2933-3118 [321026]
        Other proteins in same PDB: d5ik7a3, d5ik7b3
        automated match to d1okqa2
        complexed with ca, edo, flc, nag
      3. 2277727Domain d5ik7a1: 5ik7 A:2742-2932 [321028]
        Other proteins in same PDB: d5ik7a3, d5ik7b3
        automated match to d1dyka1
        complexed with ca, edo, flc, nag
      4. 2277728Domain d5ik7a2: 5ik7 A:2933-3118 [321029]
        Other proteins in same PDB: d5ik7a3, d5ik7b3
        automated match to d1okqa2
        complexed with ca, edo, flc, nag
    8. Domains for 5ik8:
      1. 2277752Domain d5ik8a1: 5ik8 A:2742-2932 [321053]
        Other proteins in same PDB: d5ik8a3, d5ik8b3
        automated match to d1dyka1
        complexed with 4mu, bdp, ca, edo, flc, nag, xys
      2. 2277753Domain d5ik8a2: 5ik8 A:2933-3118 [321054]
        Other proteins in same PDB: d5ik8a3, d5ik8b3
        automated match to d1okqa2
        complexed with 4mu, bdp, ca, edo, flc, nag, xys
      3. 2277777Domain d5ik8b1: 5ik8 B:2742-2932 [321078]
        Other proteins in same PDB: d5ik8a3, d5ik8b3
        automated match to d1dyka1
        complexed with 4mu, bdp, ca, edo, flc, nag, xys
      4. 2277778Domain d5ik8b2: 5ik8 B:2933-3118 [321079]
        Other proteins in same PDB: d5ik8a3, d5ik8b3
        automated match to d1okqa2
        complexed with 4mu, bdp, ca, edo, flc, nag, xys
  2. 2043314Norway rat (Rattus norvegicus) [TaxId:10116] [189379] (3 PDB entries)
    1. Domains for 2xb6:
      1. 2043316Domain d2xb6c_: 2xb6 C: [169984]
        Other proteins in same PDB: d2xb6a1, d2xb6a2, d2xb6b1, d2xb6b2
        automated match to d1c4rg_
        complexed with ca, cl, edo, mes, nag
      2. 2043317Domain d2xb6d_: 2xb6 D: [169985]
        Other proteins in same PDB: d2xb6a1, d2xb6a2, d2xb6b1, d2xb6b2
        automated match to d1c4rg_
        complexed with ca, cl, edo, mes, nag
    2. Domain for 3mw3:
    3. Domains for 3v64:
      1. 2043318Domain d3v64a1: 3v64 A:1759-1948 [195490]
        Other proteins in same PDB: d3v64a2
        automated match to d1pz9b_
        complexed with ca, nag, po4
      2. 2043319Domain d3v64b_: 3v64 B: [195489]
        Other proteins in same PDB: d3v64a2
        automated match to d1pz9b_
        complexed with ca, nag, po4

More info for Protein automated matches from b.29.1.4: Laminin G-like module

Timeline for Protein automated matches from b.29.1.4: Laminin G-like module: