Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2369590Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2369591Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2369614Family b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 proteins)
    automatically mapped to Pfam PF00754
  6. 2369655Protein automated matches [190377] (2 species)
    not a true protein

Species:

  1. 2369656Human (Homo sapiens) [TaxId:9606] [187224] (7 PDB entries)
    1. Domain for 3hnb:
    2. Domain for 3hny:
    3. Domains for 3hob:
      1. 2369659Domain d3hoba_: 3hob A: [177727]
        automated match to d1d7pm_
      2. 2369660Domain d3hobm_: 3hob M: [177728]
        automated match to d1d7pm_
    4. Domains for 3i97:
      1. 2369664Domain d3i97a_: 3i97 A: [178156]
        automated match to d1kexa_
        complexed with 8dr, gol
      2. 2369665Domain d3i97b_: 3i97 B: [178157]
        automated match to d1kexa_
        complexed with 8dr, gol
    5. Domain for 4ki5:
    6. Domains for 4pt6:
      1. 2369661Domain d4pt6a_: 4pt6 A: [271196]
        automated match to d1d7pm_
      2. 2369662Domain d4pt6b_: 4pt6 B: [271197]
        automated match to d1d7pm_
    7. Domains for 4xzu:
      1. 2369666Domain d4xzug_: 4xzu G: [279856]
        Other proteins in same PDB: d4xzub1, d4xzub2, d4xzuf1, d4xzuf2
        automated match to d3hnym_
        complexed with mg
      2. 2369667Domain d4xzum_: 4xzu M: [279857]
        Other proteins in same PDB: d4xzub1, d4xzub2, d4xzuf1, d4xzuf2
        automated match to d3hnym_
        complexed with mg
  2. 2369668Pig (Sus scrofa) [TaxId:9823] [228810] (1 PDB entry)

More info for Protein automated matches from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain)

Timeline for Protein automated matches from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain):

  • Protein automated matches from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) first appeared in SCOPe 2.01
  • Protein automated matches from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) appears in SCOPe 2.06