Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1091822Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 1091823Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (1 family) (S)
  5. 1091824Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)
  6. 1091922Protein automated matches [190369] (4 species)
    not a true protein

Species:

  1. 1091923Human immunodeficiency virus 1 [TaxId:11676] [187207] (4 PDB entries)
    1. Domain for 2pxr:
    2. Domains for 2x2d:
      1. 1091928Domain d2x2dd_: 2x2d D: [169823]
        Other proteins in same PDB: d2x2db_, d2x2dc_
        automated match to d1afva_
      2. 1091929Domain d2x2de_: 2x2d E: [169824]
        Other proteins in same PDB: d2x2db_, d2x2dc_
        automated match to d1afva_
    3. Domains for 2xde:
      1. 1091925Domain d2xdea_: 2xde A: [170044]
        automated match to d1m9xc_
        complexed with 1b0
      2. 1091926Domain d2xdeb_: 2xde B: [170045]
        automated match to d1m9xc_
        complexed with 1b0
    4. Domain for 4b4n:
  2. 1091930Human immunodeficiency virus type 2 (isolate d194) [TaxId:11713] [189055] (2 PDB entries)
    1. Domains for 2wlv:
      1. 1091931Domain d2wlva_: 2wlv A: [169438]
        automated match to d1m9dc_
      2. 1091932Domain d2wlvb_: 2wlv B: [169439]
        automated match to d1m9dc_
    2. Domains for 2x82:
      1. 1091933Domain d2x82a_: 2x82 A: [169932]
        automated match to d1m9ec_
      2. 1091934Domain d2x82b_: 2x82 B: [169933]
        automated match to d1m9ec_
      3. 1091935Domain d2x82c_: 2x82 C: [169934]
        automated match to d1m9ec_
      4. 1091936Domain d2x82d_: 2x82 D: [169935]
        automated match to d1m9ec_
  3. 1091937Murine leukemia virus [TaxId:11786] [189823] (1 PDB entry)
  4. 1091939Simian immunodeficiency virus [TaxId:11723] [193087] (1 PDB entry)

More info for Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain

Timeline for Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain: