Species:

1. Human immunodeficiency virus 1 [TaxId:11676] [187207] (7 PDB entries)

   1. Domain for 2lf4:

      • Domain d2lf4a1: 2lf4 A:0-147 [242866] Other proteins in same PDB: d2lf4a2 automated match to d3ntea1 mutant

   2. Domain for 2pxr:

      • Domain d2pxrc_: 2pxr C: [149918] automated match to d1afva_ complexed with cl, zn

   3. Domains for 2x2d:

      1. Domain d2x2dd_: 2x2d D: [169823] Other proteins in same PDB: d2x2db_, d2x2dc_ automated match to d1afva_

      2. Domain d2x2de_: 2x2d E: [169824] Other proteins in same PDB: d2x2db_, d2x2dc_ automated match to d1afva_

   4. Domains for 2xde:

      1. Domain d2xdea1: 2xde A:1-146 [170044] Other proteins in same PDB: d2xdea2 automated match to d1m9xc_ complexed with 1b0

      2. Domain d2xdeb_: 2xde B: [170045] Other proteins in same PDB: d2xdea2 automated match to d1m9xc_ complexed with 1b0

   5. Domains for 3nte:

      1. Domain d3ntea1: 3nte A:1-147 [233045] Other proteins in same PDB: d3ntea2, d3nteb2 automated match to d1e6jp2 complexed with fe, i3m, iod, na

      2. Domain d3nteb1: 3nte B:1-147 [233042] Other proteins in same PDB: d3ntea2, d3nteb2 automated match to d1e6jp2 complexed with fe, i3m, iod, na

   6. Domains for 3p05:

      1. Domain d3p05a1: 3p05 A:1-147 [239593] Other proteins in same PDB: d3p05a2, d3p05b2, d3p05c2, d3p05e2 automated match to d3p05b1 complexed with iod

      2. Domain d3p05b1: 3p05 B:1-147 [233141] Other proteins in same PDB: d3p05a2, d3p05b2, d3p05c2, d3p05e2 automated match to d1e6jp2 complexed with iod

      3. Domain d3p05c1: 3p05 C:1-147 [233143] Other proteins in same PDB: d3p05a2, d3p05b2, d3p05c2, d3p05e2 automated match to d1e6jp2 complexed with iod

      4. Domain d3p05d1: 3p05 D:1-147 [233142] Other proteins in same PDB: d3p05a2, d3p05b2, d3p05c2, d3p05e2 automated match to d1e6jp2 complexed with iod

      5. Domain d3p05e1: 3p05 E:1-147 [239595] Other proteins in same PDB: d3p05a2, d3p05b2, d3p05c2, d3p05e2 automated match to d3p05b1 complexed with iod

   7. Domain for 4b4n:

      • Domain d4b4na_: 4b4n A: [194691] automated match to d1afva_ protein/RNA complex

2. Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [232370] (2 PDB entries)

   1. Domain for 3h47:

      • Domain d3h47a1: 3h47 A:1-147 [232371] Other proteins in same PDB: d3h47a2 automated match to d1e6jp2

   2. Domains for 3h4e:

      1. Domain d3h4ea1: 3h4e A:1-147 [232376] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      2. Domain d3h4eb1: 3h4e B:1-147 [232374] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      3. Domain d3h4ec1: 3h4e C:1-147 [232375] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      4. Domain d3h4ed1: 3h4e D:1-147 [232377] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      5. Domain d3h4ee1: 3h4e E:1-147 [232378] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      6. Domain d3h4ef1: 3h4e F:1-147 [232380] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      7. Domain d3h4eg1: 3h4e G:1-147 [232379] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      8. Domain d3h4eh1: 3h4e H:1-147 [232381] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      9. Domain d3h4ei1: 3h4e I:1-147 [232382] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      10. Domain d3h4ej1: 3h4e J:1-147 [232383] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d1e6jp2

      11. Domain d3h4ek1: 3h4e K:1-147 [239333] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d3h47a1

      12. Domain d3h4el1: 3h4e L:1-147 [239335] Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2 automated match to d3h47a1

3. Human immunodeficiency virus type 1 group m subtype b (isolate ny5) [TaxId:11698] [355560] (1 PDB entry)

   • Domain for 6bhs:

     • Domain d6bhsa1: 6bhs A:1-147 [355561] Other proteins in same PDB: d6bhsa2 automated match to d4xfxa1 complexed with ihp

4. Human immunodeficiency virus type 1 [TaxId:11698] [232915] (1 PDB entry)

   • Domain for 3mge:

     • Domain d3mgea1: 3mge A:1-147 [232916] Other proteins in same PDB: d3mgea2 automated match to d1e6jp2 complexed with edo

5. Human immunodeficiency virus type 2 (isolate d194) [TaxId:11713] [189055] (2 PDB entries)

   1. Domains for 2wlv:

      1. Domain d2wlva_: 2wlv A: [169438] automated match to d1m9dc_

      2. Domain d2wlvb_: 2wlv B: [169439] automated match to d1m9dc_

   2. Domains for 2x82:

      1. Domain d2x82a_: 2x82 A: [169932] automated match to d1m9ec_

      2. Domain d2x82b_: 2x82 B: [169933] automated match to d1m9ec_

      3. Domain d2x82c_: 2x82 C: [169934] automated match to d1m9ec_

      4. Domain d2x82d_: 2x82 D: [169935] automated match to d1m9ec_

6. Murine leukemia virus [TaxId:11786] [189823] (1 PDB entry)

   • Domain for 2y4z:

     • Domain d2y4za1: 2y4z A:1-132 [170604] Other proteins in same PDB: d2y4za2 automated match to d1u7ka_ complexed with gol; mutant

7. Rous sarcoma virus (strain prague c) [TaxId:11888] [403733] (1 PDB entry)

   • Domain for 7no0:

     • Domain d7no0a1: 7no0 A:1-150 [403734] Other proteins in same PDB: d7no0a2 automated match to d1d1da2

8. Simian immunodeficiency virus [TaxId:11723] [193087] (1 PDB entry)

   • Domain for 4htw:

     • Domain d4htwa_: 4htw A: [193088] automated match to d2wlva_

More info for Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain

Timeline for Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain:

• Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain first appeared in SCOPe 2.01
  
• Protein automated matches from a.73.1.1: Retrovirus capsid protein, N-terminal core domain appears in SCOPe 2.07