Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. Family a.29.2.1: Bromodomain [47371] (6 proteins)
  6. Protein automated matches [190366] (2 species)
    not a true protein

Species:

  1. Human (Homo sapiens) [TaxId:9606] [187201] (46 PDB entries)
    1. Domain for 1b91:
    2. Domains for 3d7c:
      1. Domain d3d7ca2: 3d7c A:729-837 [157420]
        Other proteins in same PDB: d3d7ca3
        automated match to d1f68a_
      2. Domain d3d7cb_: 3d7c B: [157421]
        Other proteins in same PDB: d3d7ca3
        automated match to d1f68a_
    3. Domains for 3i3j:
      1. Domain d3i3ja_: 3i3j A: [178050]
        automated match to d1jspb_
        complexed with cl, peg, so4
      2. Domain d3i3jb_: 3i3j B: [178051]
        automated match to d1jspb_
        complexed with cl, peg, so4
      3. Domain d3i3jc_: 3i3j C: [178052]
        automated match to d1jspb_
        complexed with cl, peg, so4
      4. Domain d3i3jd_: 3i3j D: [178053]
        automated match to d1jspb_
        complexed with cl, peg, so4
      5. Domain d3i3je_: 3i3j E: [178054]
        automated match to d1jspb_
        complexed with cl, peg, so4
      6. Domain d3i3jf_: 3i3j F: [178055]
        automated match to d1jspb_
        complexed with cl, peg, so4
      7. Domain d3i3jg_: 3i3j G: [178056]
        automated match to d1jspb_
        complexed with cl, peg, so4
      8. Domain d3i3jh_: 3i3j H: [178057]
        automated match to d1jspb_
        complexed with cl, peg, so4
      9. Domain d3i3ji_: 3i3j I: [178058]
        automated match to d1jspb_
        complexed with cl, peg, so4
      10. Domain d3i3jj_: 3i3j J: [178059]
        automated match to d1jspb_
        complexed with cl, peg, so4
      11. Domain d3i3jk_: 3i3j K: [178060]
        automated match to d1jspb_
        complexed with cl, peg, so4
      12. Domain d3i3jl_: 3i3j L: [178061]
        automated match to d1jspb_
        complexed with cl, peg, so4
    4. Domains for 3p1c:
      1. Domain d3p1ca_: 3p1c A: [183445]
        automated match to d1jspb_
        complexed with aly, k, scn
      2. Domain d3p1cb_: 3p1c B: [183446]
        automated match to d1jspb_
        complexed with aly, k, scn
    5. Domains for 3p1d:
      1. Domain d3p1da_: 3p1d A: [183447]
        automated match to d1jspb_
        complexed with k, mb3, scn
      2. Domain d3p1db_: 3p1d B: [183448]
        automated match to d1jspb_
        complexed with k, mb3, scn
    6. Domains for 3p1e:
      1. Domain d3p1ea_: 3p1e A: [183449]
        automated match to d1jspb_
        complexed with dms, k, scn
      2. Domain d3p1eb_: 3p1e B: [183450]
        automated match to d1jspb_
        complexed with dms, k, scn
    7. Domains for 3p1f:
      1. Domain d3p1fa1: 3p1f A:1081-1197 [183451]
        Other proteins in same PDB: d3p1fa2
        automated match to d1jspb_
        complexed with 3pf, edo, k
      2. Domain d3p1fb_: 3p1f B: [183452]
        Other proteins in same PDB: d3p1fa2
        automated match to d1jspb_
        complexed with 3pf, edo, k
    8. Domains for 3svh:
      1. Domain d3svha_: 3svh A: [200702]
        automated match to d3p1fa_
        complexed with edo, krg
      2. Domain d3svhb_: 3svh B: [192084]
        automated match to d3p1fa_
        complexed with edo, krg
    9. Domain for 3uv5:
    10. Domains for 4a9k:
      1. Domain d4a9ka_: 4a9k A: [186740]
        automated match to d1jspb_
        complexed with edo, k, scn, tyl
      2. Domain d4a9kb_: 4a9k B: [186741]
        automated match to d1jspb_
        complexed with edo, k, scn, tyl
    11. Domains for 4nr4:
      1. Domain d4nr4a_: 4nr4 A: [229960]
        automated match to d3p1fa_
        complexed with 2lk, edo, mg
      2. Domain d4nr4b_: 4nr4 B: [229961]
        automated match to d3p1fa_
        complexed with 2lk, edo, mg
    12. Domain for 4nr5:
    13. Domain for 4nr6:
    14. Domain for 4nr7:
    15. Domains for 4nyv:
      1. Domain d4nyva_: 4nyv A: [236475]
        automated match to d3p1fa_
        complexed with 15e
      2. Domain d4nyvb_: 4nyv B: [236477]
        automated match to d3p1fa_
        complexed with 15e
      3. Domain d4nyvc_: 4nyv C: [236478]
        automated match to d3p1ea_
        complexed with 15e
      4. Domain d4nyvd_: 4nyv D: [236479]
        automated match to d3p1ea_
        complexed with 15e
    16. Domain for 4nyw:
    17. Domain for 4nyx:
    18. Domain for 5bt3:
    19. Domains for 5fdz:
      1. Domain d5fdza_: 5fdz A: [280409]
        automated match to d1wuma_
        complexed with 5x0, edo
      2. Domain d5fdzb_: 5fdz B: [280408]
        automated match to d1wuma_
        complexed with 5x0, edo
    20. Domains for 5fe0:
      1. Domain d5fe0a_: 5fe0 A: [280414]
        automated match to d1wuma_
        complexed with aly
      2. Domain d5fe0b_: 5fe0 B: [280417]
        automated match to d1wuma_
        complexed with aly
    21. Domains for 5fe1:
      1. Domain d5fe1a_: 5fe1 A: [280418]
        automated match to d1wuma_
        complexed with 12q, edo
      2. Domain d5fe1b_: 5fe1 B: [280421]
        automated match to d1wuma_
        complexed with 12q, edo
    22. Domains for 5fe2:
      1. Domain d5fe2a_: 5fe2 A: [280425]
        automated match to d1wuma_
        complexed with 5wv, edo
      2. Domain d5fe2b_: 5fe2 B: [280419]
        automated match to d1wuma_
        complexed with 5wv, edo
    23. Domains for 5fe3:
      1. Domain d5fe3a_: 5fe3 A: [280420]
        automated match to d1wuma_
        complexed with 5wx, edo
      2. Domain d5fe3b_: 5fe3 B: [280426]
        automated match to d1wuma_
        complexed with 5wx, edo
    24. Domains for 5fe4:
      1. Domain d5fe4a_: 5fe4 A: [280413]
        automated match to d1wuma_
        complexed with 5wy, edo
      2. Domain d5fe4b_: 5fe4 B: [280410]
        automated match to d1wuma_
        complexed with 5wy, edo
    25. Domains for 5fe5:
      1. Domain d5fe5a_: 5fe5 A: [280411]
        automated match to d1wuma_
        complexed with 2qc, dms, edo
      2. Domain d5fe5b_: 5fe5 B: [280412]
        automated match to d1wuma_
        complexed with 2qc, dms, edo
    26. Domains for 5fe6:
      1. Domain d5fe6a_: 5fe6 A: [280432]
        automated match to d1wuma_
        complexed with 5wz, dms, edo
      2. Domain d5fe6b_: 5fe6 B: [280431]
        automated match to d1wuma_
        complexed with 5wz, dms, edo
    27. Domains for 5fe7:
      1. Domain d5fe7a_: 5fe7 A: [280415]
        automated match to d1wuma_
        complexed with 5wu, dms, edo
      2. Domain d5fe7b_: 5fe7 B: [280416]
        automated match to d1wuma_
        complexed with 5wu, dms, edo
    28. Domains for 5fe8:
      1. Domain d5fe8a_: 5fe8 A: [280424]
        automated match to d1wuma_
        complexed with 5wt, dms, edo
      2. Domain d5fe8b_: 5fe8 B: [280422]
        automated match to d1wuma_
        complexed with 5wt, dms, edo
    29. Domains for 5fe9:
      1. Domain d5fe9a_: 5fe9 A: [280423]
        automated match to d1wuma_
        complexed with 5ws, edo
      2. Domain d5fe9b_: 5fe9 B: [280430]
        automated match to d1wuma_
        complexed with 5ws, edo
    30. Domains for 5lpk:
      1. Domain d5lpka_: 5lpk A: [337857]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      2. Domain d5lpkb_: 5lpk B: [338115]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      3. Domain d5lpkc_: 5lpk C: [337861]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      4. Domain d5lpkd_: 5lpk D: [337884]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      5. Domain d5lpke_: 5lpk E: [337902]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      6. Domain d5lpkf_: 5lpk F: [337899]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      7. Domain d5lpkg_: 5lpk G: [338088]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
    31. Domains for 5lpm:
      1. Domain d5lpma1: 5lpm A:1048-1161 [337891]
        Other proteins in same PDB: d5lpma2, d5lpmb2
        automated match to d3i3je_
        complexed with 71y, act
      2. Domain d5lpmb1: 5lpm B:1048-1161 [337862]
        Other proteins in same PDB: d5lpma2, d5lpmb2
        automated match to d3i3je_
        complexed with 71y, act
    32. Domains for 5lvq:
      1. Domain d5lvqa_: 5lvq A: [324532]
        automated match to d1b91a_
        complexed with 2lx, dms, edo
      2. Domain d5lvqb_: 5lvq B: [324548]
        automated match to d1b91a_
        complexed with 2lx, dms, edo
    33. Domains for 5lvr:
      1. Domain d5lvra_: 5lvr A: [324576]
        automated match to d1b91a_
        complexed with 78y, dms, edo
      2. Domain d5lvrb_: 5lvr B: [324533]
        automated match to d1b91a_
        complexed with 78y, dms, edo
    34. Domains for 5mkx:
      1. Domain d5mkxa_: 5mkx A: [343163]
        automated match to d1b91a_
        complexed with 82i, bu1, epe, so4
      2. Domain d5mkxb_: 5mkx B: [343142]
        automated match to d1b91a_
        complexed with 82i, bu1, epe, so4
    35. Domains for 5mlj:
      1. Domain d5mlja_: 5mlj A: [343181]
        automated match to d1b91a_
        complexed with 9st, edo
      2. Domain d5mljb_: 5mlj B: [343131]
        automated match to d1b91a_
        complexed with 9st, edo
    36. Domains for 5nu5:
      1. Domain d5nu5a1: 5nu5 A:1048-1161 [337894]
        Other proteins in same PDB: d5nu5a2, d5nu5b2
        automated match to d3i3je_
        complexed with 99e, edo
      2. Domain d5nu5b1: 5nu5 B:1048-1161 [337879]
        Other proteins in same PDB: d5nu5a2, d5nu5b2
        automated match to d3i3je_
        complexed with 99e, edo
    37. Domains for 6j3o:
      1. Domain d6j3oa_: 6j3o A: [368416]
        automated match to d1b91a_
        complexed with b4l
      2. Domain d6j3ob_: 6j3o B: [368415]
        automated match to d1b91a_
        complexed with b4l
    38. Domains for 6j3p:
      1. Domain d6j3pa_: 6j3p A: [368418]
        automated match to d1b91a_
        complexed with b8o
      2. Domain d6j3pb_: 6j3p B: [368417]
        automated match to d1b91a_
        complexed with b8o
    39. Domains for 6lqx:
      1. Domain d6lqxa_: 6lqx A: [399880]
        automated match to d4nyxa_
        complexed with eoo, na
      2. Domain d6lqxb_: 6lqx B: [399828]
        automated match to d4nyxa_
        complexed with eoo, na
      3. Domain d6lqxc_: 6lqx C: [399905]
        automated match to d4nyxa_
        complexed with eoo, na
      4. Domain d6lqxd_: 6lqx D: [399901]
        automated match to d4nyxa_
        complexed with eoo, na
    40. Domains for 6sw3:
      1. Domain d6sw3a_: 6sw3 A: [375889]
        Other proteins in same PDB: d6sw3b2
        automated match to d4nyxa_
        mutant
      2. Domain d6sw3b1: 6sw3 B:1081-1197 [375891]
        Other proteins in same PDB: d6sw3b2
        automated match to d4nyxa_
        mutant
    41. Domains for 6sxx:
      1. Domain d6sxxa_: 6sxx A: [391878]
        automated match to d4nyxa_
        complexed with edo, lxq
      2. Domain d6sxxb_: 6sxx B: [391751]
        automated match to d4nyxa_
        complexed with edo, lxq
    42. Domains for 6yij:
      1. Domain d6yija1: 6yij A:1081-1197 [383870]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      2. Domain d6yijb1: 6yij B:1081-1197 [383927]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      3. Domain d6yijc1: 6yij C:1081-1197 [383950]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      4. Domain d6yijd_: 6yij D: [383869]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      5. Domain d6yije_: 6yij E: [383882]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      6. Domain d6yijf1: 6yij F:1081-1196 [383886]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
      7. Domain d6yijg_: 6yij G: [383943]
        Other proteins in same PDB: d6yija2, d6yijb2, d6yijc2, d6yijf2
        automated match to d4nyxa_
        complexed with osn
    43. Domains for 6yik:
      1. Domain d6yika_: 6yik A: [383959]
        automated match to d4nyxa_
        complexed with osq
      2. Domain d6yikb_: 6yik B: [383920]
        automated match to d4nyxa_
        complexed with osq
      3. Domain d6yikc_: 6yik C: [383954]
        automated match to d4nyxa_
        complexed with osq
    44. Domain for 6yil:
    45. Domain for 6yim:
    46. Domains for 7kpy:
      1. Domain d7kpya_: 7kpy A: [405552]
        automated match to d4nyxa_
        complexed with edo, wu1
      2. Domain d7kpyb_: 7kpy B: [405410]
        automated match to d4nyxa_
        complexed with edo, wu1
  2. Mouse (Mus musculus) [TaxId:10090] [343120] (1 PDB entry)

More info for Protein automated matches from a.29.2.1: Bromodomain

Timeline for Protein automated matches from a.29.2.1: Bromodomain: