Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2159632Superfamily d.15.2: CAD & PB1 domains [54277] (3 families) (S)
    contain extra helix; similar heterodimerization modes; possibly related to the ubiquitin-like superfamily
  5. 2159648Family d.15.2.2: PB1 domain [64225] (11 protein domains)
    Pfam PF00564
    forms heterodimers, although not all PB1 domain pairs associate.
  6. 2159698Protein automated matches [190335] (3 species)
    not a true protein

Species:

  1. 2159699Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255343] (2 PDB entries)
    1. Domain for 2kfj:
    2. Domains for 2kfk:
      1. 2159700Domain d2kfka1: 2kfk A:4-78 [242499]
        Other proteins in same PDB: d2kfka2, d2kfkb2
        automated match to d1ip9a_
      2. 2159701Domain d2kfkb1: 2kfk B:104-186 [242500]
        Other proteins in same PDB: d2kfka2, d2kfkb2
        automated match to d1q1oa_
  2. 2159703Human (Homo sapiens) [TaxId:9606] [187157] (2 PDB entries)
    1. Domain for 2g4s:
    2. Domain for 2pph:
  3. 2159706Norway rat (Rattus norvegicus) [TaxId:10116] [259200] (1 PDB entry)

More info for Protein automated matches from d.15.2.2: PB1 domain

Timeline for Protein automated matches from d.15.2.2: PB1 domain: