Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.58: Ferredoxin-like [54861] (59 superfamilies) alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 |
Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families) |
Family d.58.7.1: Canonical RBD [54929] (68 proteins) |
Protein automated matches [190332] (2 species) not a true protein |
Human (Homo sapiens) [TaxId:9606] [187155] (13 PDB entries) |
Domain d2ek1a_: 2ek1 A: [164107] automated match to d2cqpa1 |
Domain d2ek1b_: 2ek1 B: [164108] automated match to d2cqpa1 |
Domain d2ek1c_: 2ek1 C: [164109] automated match to d2cqpa1 |
Domain d2ek1d_: 2ek1 D: [164110] automated match to d2cqpa1 |
Domain d2ek1e_: 2ek1 E: [164111] automated match to d2cqpa1 |
Domain d2ek1f_: 2ek1 F: [164112] automated match to d2cqpa1 |
Domain d2ek1g_: 2ek1 G: [164113] automated match to d2cqpa1 |
Domain d2ek1h_: 2ek1 H: [164114] automated match to d2cqpa1 |
Domain d2ek6a_: 2ek6 A: [164121] automated match to d2cqpa1 |
Domain d2ek6b_: 2ek6 B: [164122] automated match to d2cqpa1 |
Domain d2ek6c_: 2ek6 C: [164123] automated match to d2cqpa1 |
Domain d2ek6d_: 2ek6 D: [164124] automated match to d2cqpa1 |
Domain d2j0sd_: 2j0s D: [137916] Other proteins in same PDB: d2j0sa1, d2j0sa2, d2j0sc_ automated match to d1p27b_ protein/DNA complex; protein/RNA complex; complexed with anp, mg |
Domain d3h2ve_: 3h2v E: [177160] Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_ automated match to d1wi6a1 protein/RNA complex |
Domain d3h2vf_: 3h2v F: [177161] Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_ automated match to d1wi6a1 protein/RNA complex |
Domain d3h2vg_: 3h2v G: [177162] Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_ automated match to d1wi6a1 protein/RNA complex |
Domain d3h2vh_: 3h2v H: [177163] Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_ automated match to d1wi6a1 protein/RNA complex |
Domain d3lpya_: 3lpy A: [180503] automated match to d2cqba1 complexed with epe, so4 |
Domain d3lpyb_: 3lpy B: [180504] automated match to d2cqba1 complexed with epe, so4 |
Domain d3lqva_: 3lqv A: [180519] automated match to d2f9da1 complexed with ade |
Domain d3lqvb_: 3lqv B: [180520] automated match to d2f9da1 complexed with ade |
Domain d3mdfa_: 3mdf A: [181019] automated match to d2cqba1 |
Domain d3mdfb_: 3mdf B: [181020] automated match to d2cqba1 |
Domain d3s7ra_: 3s7r A: [200592] automated match to d3s7rb_ complexed with unl |
Domain d3s7rb_: 3s7r B: [196248] automated match to d1hd0a_ complexed with unl |
Domain d3zzya_: 3zzy A: [218621] automated match to d1sjra_ protein/RNA complex |
Domain d3zzyb_: 3zzy B: [218622] automated match to d1sjra_ protein/RNA complex |
Domain d3zzza_: 3zzz A: [218623] automated match to d1sjra_ protein/RNA complex; complexed with iod |
Domain d3zzzb_: 3zzz B: [218624] automated match to d1sjra_ protein/RNA complex; complexed with iod |
Domain d4ckoa1: 4cko A:337-444 [236310] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckob1: 4cko B:337-444 [236308] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckoc1: 4cko C:337-444 [236309] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckod1: 4cko D:337-444 [236306] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckoe1: 4cko E:337-444 [236311] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckof1: 4cko F:337-444 [236313] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckog1: 4cko G:337-444 [236312] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4ckoh1: 4cko H:337-444 [236307] Other proteins in same PDB: d4ckob2, d4ckoc2, d4ckod2, d4ckoe2, d4ckof2, d4ckog2, d4ckoh2 automated match to d1qm9a1 complexed with cl, zn |
Domain d4cq1a1: 4cq1 A:337-444 [236982] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1b1: 4cq1 B:336-444 [236983] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1c1: 4cq1 C:337-444 [236985] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1d1: 4cq1 D:337-444 [236988] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1e1: 4cq1 E:337-444 [236984] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1f1: 4cq1 F:337-444 [236986] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1g1: 4cq1 G:337-444 [236987] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4cq1h1: 4cq1 H:337-444 [236989] Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2 automated match to d4ckob1 complexed with cl, zn |
Domain d4iufa_: 4iuf A: [236408] automated match to d1uawa_ protein/DNA complex; protein/RNA complex |
Mouse (Mus musculus) [TaxId:10090] [188825] (2 PDB entries) |
Domain d3d2wa_: 3d2w A: [173655] automated match to d1wf0a_ protein/DNA complex; protein/RNA complex; complexed with po4 |
Domain d3v4ma_: 3v4m A: [201157] automated match to d3v4mb_ complexed with cl, na |
Domain d3v4mb_: 3v4m B: [195127] automated match to d1o0pa_ complexed with cl, na |
Timeline for Protein automated matches from d.58.7.1: Canonical RBD: