Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1203810Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 1205320Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families) (S)
  5. 1205321Family d.58.7.1: Canonical RBD [54929] (68 proteins)
  6. 1205739Protein automated matches [190332] (2 species)
    not a true protein

Species:

  1. 1205740Human (Homo sapiens) [TaxId:9606] [187155] (11 PDB entries)
    1. Domains for 2ek1:
      1. 1205745Domain d2ek1a_: 2ek1 A: [164107]
        automated match to d2cqpa1
      2. 1205746Domain d2ek1b_: 2ek1 B: [164108]
        automated match to d2cqpa1
      3. 1205747Domain d2ek1c_: 2ek1 C: [164109]
        automated match to d2cqpa1
      4. 1205748Domain d2ek1d_: 2ek1 D: [164110]
        automated match to d2cqpa1
      5. 1205749Domain d2ek1e_: 2ek1 E: [164111]
        automated match to d2cqpa1
      6. 1205750Domain d2ek1f_: 2ek1 F: [164112]
        automated match to d2cqpa1
      7. 1205751Domain d2ek1g_: 2ek1 G: [164113]
        automated match to d2cqpa1
      8. 1205752Domain d2ek1h_: 2ek1 H: [164114]
        automated match to d2cqpa1
    2. Domains for 2ek6:
      1. 1205757Domain d2ek6a_: 2ek6 A: [164121]
        automated match to d2cqpa1
      2. 1205758Domain d2ek6b_: 2ek6 B: [164122]
        automated match to d2cqpa1
      3. 1205759Domain d2ek6c_: 2ek6 C: [164123]
        automated match to d2cqpa1
      4. 1205760Domain d2ek6d_: 2ek6 D: [164124]
        automated match to d2cqpa1
    3. Domain for 2hzc:
    4. Domain for 2j0s:
    5. Domain for 3fey:
    6. Domains for 3h2v:
      1. 1205765Domain d3h2ve_: 3h2v E: [177160]
        automated match to d1wi6a1
        protein/RNA complex
      2. 1205766Domain d3h2vf_: 3h2v F: [177161]
        automated match to d1wi6a1
        protein/RNA complex
      3. 1205767Domain d3h2vg_: 3h2v G: [177162]
        automated match to d1wi6a1
        protein/RNA complex
      4. 1205768Domain d3h2vh_: 3h2v H: [177163]
        automated match to d1wi6a1
        protein/RNA complex
    7. Domains for 3lpy:
      1. 1205753Domain d3lpya_: 3lpy A: [180503]
        automated match to d2cqba1
        complexed with epe, so4
      2. 1205754Domain d3lpyb_: 3lpy B: [180504]
        automated match to d2cqba1
        complexed with epe, so4
    8. Domains for 3lqv:
      1. 1205761Domain d3lqva_: 3lqv A: [180519]
        automated match to d2f9da1
        complexed with ade
      2. 1205762Domain d3lqvb_: 3lqv B: [180520]
        automated match to d2f9da1
        complexed with ade
    9. Domains for 3mdf:
      1. 1205742Domain d3mdfa_: 3mdf A: [181019]
        automated match to d2cqba1
      2. 1205743Domain d3mdfb_: 3mdf B: [181020]
        automated match to d2cqba1
    10. Domain for 3s7r:
    11. Domains for 4fxw:
      1. 1205763Domain d4fxwa_: 4fxw A: [194143]
        automated match to d1o0pa_
        protein/RNA complex; complexed with so4
      2. 1205764Domain d4fxwc_: 4fxw C: [194142]
        automated match to d1o0pa_
        protein/RNA complex; complexed with so4
  2. 1205769Mouse (Mus musculus) [TaxId:10090] [188825] (2 PDB entries)
    1. Domain for 3d2w:
      • 1205770Domain d3d2wa_: 3d2w A: [173655]
        automated match to d1wf0a_
        protein/DNA complex; protein/RNA complex; complexed with po4
    2. Domain for 3v4m:

More info for Protein automated matches from d.58.7.1: Canonical RBD

Timeline for Protein automated matches from d.58.7.1: Canonical RBD: