SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
Fold f.27: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81525] (1 superfamily)
membrane-associated alpha-helical protein; no transmembrane helices
Superfamily f.27.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81524] (1 family)
location - matrix side of the bc1 complex
automatically mapped to Pfam PF02271
Family f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81523] (2 proteins)
probably important for the complex assembly, caps the matrix face of cytochrome b
Protein automated matches [190325] (4 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187143] (1 PDB entry)

Domain for 2ibz:

Domain d2ibzf_: 2ibz F: [137225]
Other proteins in same PDB: d2ibza1, d2ibza2, d2ibzb1, d2ibzb2, d2ibzc1, d2ibzc2, d2ibzd1, d2ibzd2, d2ibze1, d2ibze2, d2ibzg_, d2ibzh_, d2ibzi_, d2ibzx_, d2ibzy_
automated match to d1ezvf_
complexed with fes, hem, sma, uq6

Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [187309] (5 PDB entries)

Domains for 3cx5:

Domain d3cx5g_: 3cx5 G: [157087]
Other proteins in same PDB: d3cx5a1, d3cx5a2, d3cx5b1, d3cx5b2, d3cx5c1, d3cx5c2, d3cx5d1, d3cx5d2, d3cx5e1, d3cx5e2, d3cx5f_, d3cx5h_, d3cx5i_, d3cx5j_, d3cx5k_, d3cx5l1, d3cx5l2, d3cx5m1, d3cx5m2, d3cx5n1, d3cx5n2, d3cx5o1, d3cx5o2, d3cx5p1, d3cx5p2, d3cx5q_, d3cx5s_, d3cx5t_, d3cx5u_, d3cx5v_, d3cx5w_
automated match to d1ezvf_
complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, sma, suc, umq

Domain d3cx5r_: 3cx5 R: [157103]
Other proteins in same PDB: d3cx5a1, d3cx5a2, d3cx5b1, d3cx5b2, d3cx5c1, d3cx5c2, d3cx5d1, d3cx5d2, d3cx5e1, d3cx5e2, d3cx5f_, d3cx5h_, d3cx5i_, d3cx5j_, d3cx5k_, d3cx5l1, d3cx5l2, d3cx5m1, d3cx5m2, d3cx5n1, d3cx5n2, d3cx5o1, d3cx5o2, d3cx5p1, d3cx5p2, d3cx5q_, d3cx5s_, d3cx5t_, d3cx5u_, d3cx5v_, d3cx5w_
automated match to d1ezvf_
complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, sma, suc, umq

Domains for 3cxh:

Domain d3cxhg_: 3cxh G: [157120]
Other proteins in same PDB: d3cxha1, d3cxha2, d3cxhb1, d3cxhb2, d3cxhc1, d3cxhc2, d3cxhd1, d3cxhd2, d3cxhe1, d3cxhe2, d3cxhf_, d3cxhh_, d3cxhi_, d3cxhj_, d3cxhk_, d3cxhl1, d3cxhl2, d3cxhm1, d3cxhm2, d3cxhn1, d3cxhn2, d3cxho1, d3cxho2, d3cxhp1, d3cxhp2, d3cxhq_, d3cxhs_, d3cxht_, d3cxhu_, d3cxhv_, d3cxhw_
automated match to d1ezvf_
complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, sma, suc, umq

Domain d3cxhr_: 3cxh R: [157136]
Other proteins in same PDB: d3cxha1, d3cxha2, d3cxhb1, d3cxhb2, d3cxhc1, d3cxhc2, d3cxhd1, d3cxhd2, d3cxhe1, d3cxhe2, d3cxhf_, d3cxhh_, d3cxhi_, d3cxhj_, d3cxhk_, d3cxhl1, d3cxhl2, d3cxhm1, d3cxhm2, d3cxhn1, d3cxhn2, d3cxho1, d3cxho2, d3cxhp1, d3cxhp2, d3cxhq_, d3cxhs_, d3cxht_, d3cxhu_, d3cxhv_, d3cxhw_
automated match to d1ezvf_
complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, sma, suc, umq

Domain for 4pd4:

Domain d4pd4g_: 4pd4 G: [257480]
Other proteins in same PDB: d4pd4a1, d4pd4a2, d4pd4b1, d4pd4b2, d4pd4c1, d4pd4c2, d4pd4d1, d4pd4d2, d4pd4e1, d4pd4e2, d4pd4f_, d4pd4h_, d4pd4i_, d4pd4j_, d4pd4k_
automated match to d3cx5g_
complexed with 3pe, 3ph, aoq, fes, hem, umq, uq6

Domains for 6t0b:

Domain d6t0bg_: 6t0b G: [384254]
Other proteins in same PDB: d6t0ba1, d6t0ba2, d6t0bb1, d6t0bb2, d6t0bc1, d6t0bc2, d6t0bd1, d6t0bd2, d6t0be1, d6t0be2, d6t0bf_, d6t0bh_, d6t0bi_, d6t0bj_, d6t0bl1, d6t0bl2, d6t0bm1, d6t0bm2, d6t0bn1, d6t0bn2, d6t0bo1, d6t0bo2, d6t0bp1, d6t0bp2, d6t0bq_, d6t0bs_, d6t0bt_, d6t0bw_
automated match to d3cx5g_
complexed with ca, cdl, cu, cua, fes, hea, hec, hem, mg, pcf, pef, zn

Domain d6t0br_: 6t0b R: [384557]
Other proteins in same PDB: d6t0ba1, d6t0ba2, d6t0bb1, d6t0bb2, d6t0bc1, d6t0bc2, d6t0bd1, d6t0bd2, d6t0be1, d6t0be2, d6t0bf_, d6t0bh_, d6t0bi_, d6t0bj_, d6t0bl1, d6t0bl2, d6t0bm1, d6t0bm2, d6t0bn1, d6t0bn2, d6t0bo1, d6t0bo2, d6t0bp1, d6t0bp2, d6t0bq_, d6t0bs_, d6t0bt_, d6t0bw_
automated match to d3cx5g_
complexed with ca, cdl, cu, cua, fes, hea, hec, hem, mg, pcf, pef, zn

Domains for 6ymx:

Domain d6ymxg_: 6ymx G: [393703]
Other proteins in same PDB: d6ymxa1, d6ymxa2, d6ymxb1, d6ymxb2, d6ymxc_, d6ymxd1, d6ymxd2, d6ymxe1, d6ymxe2, d6ymxf_, d6ymxh_, d6ymxi_, d6ymxj_, d6ymxl1, d6ymxl2, d6ymxm1, d6ymxm2, d6ymxn1, d6ymxn2, d6ymxo1, d6ymxo2, d6ymxp1, d6ymxp2, d6ymxq_, d6ymxs_, d6ymxt_
automated match to d3cx5g_
complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, cu, cua, fes, hea, hem, pcf, pty, uq6, zn

Domain d6ymxr_: 6ymx R: [393831]
Other proteins in same PDB: d6ymxa1, d6ymxa2, d6ymxb1, d6ymxb2, d6ymxc_, d6ymxd1, d6ymxd2, d6ymxe1, d6ymxe2, d6ymxf_, d6ymxh_, d6ymxi_, d6ymxj_, d6ymxl1, d6ymxl2, d6ymxm1, d6ymxm2, d6ymxn1, d6ymxn2, d6ymxo1, d6ymxo2, d6ymxp1, d6ymxp2, d6ymxq_, d6ymxs_, d6ymxt_
automated match to d3cx5g_
complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, cu, cua, fes, hea, hem, pcf, pty, uq6, zn

Chicken (Gallus gallus) [TaxId:9031] [189228] (8 PDB entries)

Domains for 3h1h:

Domain d3h1hf_: 3h1h F: [246422]
Other proteins in same PDB: d3h1ha1, d3h1ha2, d3h1hb1, d3h1hb2, d3h1hc1, d3h1hc2, d3h1hd1, d3h1hd2, d3h1he1, d3h1he2, d3h1hg_, d3h1hh_, d3h1hj_, d3h1hn1, d3h1hn2, d3h1ho1, d3h1ho2, d3h1hp1, d3h1hp2, d3h1hq1, d3h1hq2, d3h1hr1, d3h1hr2, d3h1ht_, d3h1hu_, d3h1hw_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, pee, unl, uq

Domain d3h1hs_: 3h1h S: [246434]
Other proteins in same PDB: d3h1ha1, d3h1ha2, d3h1hb1, d3h1hb2, d3h1hc1, d3h1hc2, d3h1hd1, d3h1hd2, d3h1he1, d3h1he2, d3h1hg_, d3h1hh_, d3h1hj_, d3h1hn1, d3h1hn2, d3h1ho1, d3h1ho2, d3h1hp1, d3h1hp2, d3h1hq1, d3h1hq2, d3h1hr1, d3h1hr2, d3h1ht_, d3h1hu_, d3h1hw_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, pee, unl, uq

Domains for 3h1j:

Domain d3h1jf_: 3h1j F: [246446]
Other proteins in same PDB: d3h1ja1, d3h1ja2, d3h1jb1, d3h1jb2, d3h1jc1, d3h1jc2, d3h1jd1, d3h1jd2, d3h1je1, d3h1je2, d3h1jg_, d3h1jh_, d3h1jj_, d3h1jn1, d3h1jn2, d3h1jo1, d3h1jo2, d3h1jp1, d3h1jp2, d3h1jq1, d3h1jq2, d3h1jr1, d3h1jr2, d3h1jt_, d3h1ju_, d3h1jw_
automated match to d1l0lf_
complexed with cdl, fes, gol, hec, hem, pee, plc, sma, unl, uq

Domain d3h1js_: 3h1j S: [246458]
Other proteins in same PDB: d3h1ja1, d3h1ja2, d3h1jb1, d3h1jb2, d3h1jc1, d3h1jc2, d3h1jd1, d3h1jd2, d3h1je1, d3h1je2, d3h1jg_, d3h1jh_, d3h1jj_, d3h1jn1, d3h1jn2, d3h1jo1, d3h1jo2, d3h1jp1, d3h1jp2, d3h1jq1, d3h1jq2, d3h1jr1, d3h1jr2, d3h1jt_, d3h1ju_, d3h1jw_
automated match to d1l0lf_
complexed with cdl, fes, gol, hec, hem, pee, plc, sma, unl, uq

Domains for 3l70:

Domain d3l70f_: 3l70 F: [180009]
Other proteins in same PDB: d3l70a1, d3l70a2, d3l70b1, d3l70b2, d3l70c1, d3l70c2, d3l70d1, d3l70d2, d3l70e1, d3l70e2, d3l70g_, d3l70h_, d3l70j_, d3l70n1, d3l70o1, d3l70o2, d3l70p1, d3l70p2, d3l70q1, d3l70q2, d3l70r1, d3l70r2, d3l70t_, d3l70u_, d3l70w_
automated match to d1sqpf1
complexed with bog, cdl, fes, gol, hec, hem, jzv, pee, uq

Domain d3l70s_: 3l70 S: [180013]
Other proteins in same PDB: d3l70a1, d3l70a2, d3l70b1, d3l70b2, d3l70c1, d3l70c2, d3l70d1, d3l70d2, d3l70e1, d3l70e2, d3l70g_, d3l70h_, d3l70j_, d3l70n1, d3l70o1, d3l70o2, d3l70p1, d3l70p2, d3l70q1, d3l70q2, d3l70r1, d3l70r2, d3l70t_, d3l70u_, d3l70w_
automated match to d1sqpf1
complexed with bog, cdl, fes, gol, hec, hem, jzv, pee, uq

Domains for 3l71:

Domain d3l71f_: 3l71 F: [180017]
Other proteins in same PDB: d3l71a1, d3l71a2, d3l71b1, d3l71b2, d3l71c1, d3l71c2, d3l71d1, d3l71d2, d3l71e1, d3l71e2, d3l71g_, d3l71h_, d3l71j_, d3l71n1, d3l71n2, d3l71o1, d3l71o2, d3l71p1, d3l71p2, d3l71q1, d3l71q2, d3l71r1, d3l71r2, d3l71t_, d3l71u_, d3l71w_
automated match to d1sqpf1
complexed with azo, bog, cdl, fes, gol, hec, hem, pee, uq

Domain d3l71s_: 3l71 S: [180021]
Other proteins in same PDB: d3l71a1, d3l71a2, d3l71b1, d3l71b2, d3l71c1, d3l71c2, d3l71d1, d3l71d2, d3l71e1, d3l71e2, d3l71g_, d3l71h_, d3l71j_, d3l71n1, d3l71n2, d3l71o1, d3l71o2, d3l71p1, d3l71p2, d3l71q1, d3l71q2, d3l71r1, d3l71r2, d3l71t_, d3l71u_, d3l71w_
automated match to d1sqpf1
complexed with azo, bog, cdl, fes, gol, hec, hem, pee, uq

Domains for 3l72:

Domain d3l72f_: 3l72 F: [247372]
Other proteins in same PDB: d3l72a1, d3l72a2, d3l72b1, d3l72b2, d3l72c1, d3l72c2, d3l72d1, d3l72d2, d3l72e1, d3l72e2, d3l72g_, d3l72h_, d3l72j_, d3l72n1, d3l72n2, d3l72o1, d3l72o2, d3l72p1, d3l72p2, d3l72q1, d3l72q2, d3l72r1, d3l72r2, d3l72t_, d3l72u_, d3l72w_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, ikr, pee, uq

Domain d3l72s_: 3l72 S: [247384]
Other proteins in same PDB: d3l72a1, d3l72a2, d3l72b1, d3l72b2, d3l72c1, d3l72c2, d3l72d1, d3l72d2, d3l72e1, d3l72e2, d3l72g_, d3l72h_, d3l72j_, d3l72n1, d3l72n2, d3l72o1, d3l72o2, d3l72p1, d3l72p2, d3l72q1, d3l72q2, d3l72r1, d3l72r2, d3l72t_, d3l72u_, d3l72w_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, ikr, pee, uq

Domains for 3l73:

Domain d3l73f_: 3l73 F: [247396]
Other proteins in same PDB: d3l73a1, d3l73a2, d3l73b1, d3l73b2, d3l73c1, d3l73c2, d3l73d1, d3l73d2, d3l73e1, d3l73e2, d3l73g_, d3l73h_, d3l73j_, d3l73n1, d3l73n2, d3l73o1, d3l73o2, d3l73p1, d3l73p2, d3l73q1, d3l73q2, d3l73r1, d3l73r2, d3l73t_, d3l73u_, d3l73w_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, jzz, pee, uq

Domain d3l73s_: 3l73 S: [247408]
Other proteins in same PDB: d3l73a1, d3l73a2, d3l73b1, d3l73b2, d3l73c1, d3l73c2, d3l73d1, d3l73d2, d3l73e1, d3l73e2, d3l73g_, d3l73h_, d3l73j_, d3l73n1, d3l73n2, d3l73o1, d3l73o2, d3l73p1, d3l73p2, d3l73q1, d3l73q2, d3l73r1, d3l73r2, d3l73t_, d3l73u_, d3l73w_
automated match to d1l0lf_
complexed with bog, cdl, fes, gol, hec, hem, jzz, pee, uq

Domains for 3l74:

Domain d3l74f_: 3l74 F: [180025]
Other proteins in same PDB: d3l74a1, d3l74a2, d3l74b1, d3l74b2, d3l74c1, d3l74c2, d3l74d1, d3l74d2, d3l74e1, d3l74e2, d3l74g_, d3l74h_, d3l74j_, d3l74n1, d3l74n2, d3l74o1, d3l74o2, d3l74p1, d3l74p2, d3l74q1, d3l74q2, d3l74r1, d3l74r2, d3l74t_, d3l74u_, d3l74w_
automated match to d1sqpf1
complexed with azi, bog, cdl, fes, fmx, hec, hem, pee, unl, uq

Domain d3l74s_: 3l74 S: [180029]
Other proteins in same PDB: d3l74a1, d3l74a2, d3l74b1, d3l74b2, d3l74c1, d3l74c2, d3l74d1, d3l74d2, d3l74e1, d3l74e2, d3l74g_, d3l74h_, d3l74j_, d3l74n1, d3l74n2, d3l74o1, d3l74o2, d3l74p1, d3l74p2, d3l74q1, d3l74q2, d3l74r1, d3l74r2, d3l74t_, d3l74u_, d3l74w_
automated match to d1sqpf1
complexed with azi, bog, cdl, fes, fmx, hec, hem, pee, unl, uq

Domains for 3l75:

Domain d3l75f_: 3l75 F: [180033]
Other proteins in same PDB: d3l75a1, d3l75a2, d3l75b1, d3l75b2, d3l75c1, d3l75c2, d3l75d1, d3l75d2, d3l75e1, d3l75e2, d3l75g_, d3l75h_, d3l75j_, d3l75n1, d3l75n2, d3l75o1, d3l75o2, d3l75p1, d3l75p2, d3l75q1, d3l75q2, d3l75r1, d3l75r2, d3l75t_, d3l75u_, d3l75w_
automated match to d1sqpf1
complexed with azi, bog, cdl, fes, fnm, hec, hem, pee, unl, uq

Domain d3l75s_: 3l75 S: [180037]
Other proteins in same PDB: d3l75a1, d3l75a2, d3l75b1, d3l75b2, d3l75c1, d3l75c2, d3l75d1, d3l75d2, d3l75e1, d3l75e2, d3l75g_, d3l75h_, d3l75j_, d3l75n1, d3l75n2, d3l75o1, d3l75o2, d3l75p1, d3l75p2, d3l75q1, d3l75q2, d3l75r1, d3l75r2, d3l75t_, d3l75u_, d3l75w_
automated match to d1sqpf1
complexed with azi, bog, cdl, fes, fnm, hec, hem, pee, unl, uq

Cow (Bos taurus) [TaxId:9913] [192447] (4 PDB entries)

Domain for 1sqv:

Domain d1sqvf_: 1sqv F: [119028]
Other proteins in same PDB: d1sqva1, d1sqva2, d1sqvb1, d1sqvb2, d1sqvc1, d1sqvc2, d1sqvd1, d1sqvd2, d1sqve1, d1sqve2, d1sqvg_, d1sqvh_, d1sqvi_, d1sqvj_, d1sqvk_
automated match to d1qcrf_
complexed with fes, hem, uhd, uq2

Domain for 1sqx:

Domain d1sqxf_: 1sqx F: [119043]
Other proteins in same PDB: d1sqxa1, d1sqxa2, d1sqxb1, d1sqxb2, d1sqxc1, d1sqxc2, d1sqxd1, d1sqxd2, d1sqxe1, d1sqxe2, d1sqxg_, d1sqxh_, d1sqxi_, d1sqxj_, d1sqxk_
automated match to d1qcrf_
complexed with fes, hem, sma, uq2

Domains for 2a06:

Domain d2a06f_: 2a06 F: [125925]
Other proteins in same PDB: d2a06a1, d2a06a2, d2a06b1, d2a06b2, d2a06c1, d2a06c2, d2a06d1, d2a06d2, d2a06e1, d2a06e2, d2a06g_, d2a06h_, d2a06i_, d2a06j_, d2a06n1, d2a06n2, d2a06o1, d2a06o2, d2a06p1, d2a06p2, d2a06q1, d2a06q2, d2a06r1, d2a06r2, d2a06t_, d2a06u_, d2a06v_, d2a06w_
automated match to d1qcrf_
complexed with azi, cdl, fes, gol, hec, hem, jzr, pee, po4, sma, unl, uq

Domain d2a06s_: 2a06 S: [125934]
Other proteins in same PDB: d2a06a1, d2a06a2, d2a06b1, d2a06b2, d2a06c1, d2a06c2, d2a06d1, d2a06d2, d2a06e1, d2a06e2, d2a06g_, d2a06h_, d2a06i_, d2a06j_, d2a06n1, d2a06n2, d2a06o1, d2a06o2, d2a06p1, d2a06p2, d2a06q1, d2a06q2, d2a06r1, d2a06r2, d2a06t_, d2a06u_, d2a06v_, d2a06w_
automated match to d1qcrf_
complexed with azi, cdl, fes, gol, hec, hem, jzr, pee, po4, sma, unl, uq

Domain for 2fyu:

Domain d2fyuf_: 2fyu F: [134400]
Other proteins in same PDB: d2fyua1, d2fyua2, d2fyub1, d2fyub2, d2fyuc1, d2fyuc2, d2fyud1, d2fyud2, d2fyue1, d2fyue2, d2fyug_, d2fyuh_, d2fyui_, d2fyuj_, d2fyuk_
automated match to d1qcrf_
complexed with fdn, fes, hem

More info for Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Timeline for Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase):

Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) first appeared in SCOPe 2.01
Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) appears in SCOPe 2.06
Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) appears in the current release, SCOPe 2.08