Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2255648Fold f.27: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81525] (1 superfamily)
    membrane-associated alpha-helical protein; no transmembrane helices
  4. 2255649Superfamily f.27.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81524] (1 family) (S)
    location - matrix side of the bc1 complex
    automatically mapped to Pfam PF02271
  5. 2255650Family f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) [81523] (2 proteins)
    probably important for the complex assembly, caps the matrix face of cytochrome b
  6. 2255680Protein automated matches [190325] (4 species)
    not a true protein

Species:

  1. 2255681Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187143] (1 PDB entry)
  2. 2255683Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [187309] (3 PDB entries)
    1. Domains for 3cx5:
      1. 2255684Domain d3cx5g_: 3cx5 G: [157087]
        Other proteins in same PDB: d3cx5a1, d3cx5a2, d3cx5b1, d3cx5b2, d3cx5c1, d3cx5c2, d3cx5d1, d3cx5d2, d3cx5e1, d3cx5e2, d3cx5f_, d3cx5h_, d3cx5i_, d3cx5j_, d3cx5k_, d3cx5l1, d3cx5l2, d3cx5m1, d3cx5m2, d3cx5n1, d3cx5n2, d3cx5o1, d3cx5o2, d3cx5p1, d3cx5p2, d3cx5q_, d3cx5s_, d3cx5t_, d3cx5u_, d3cx5v_, d3cx5w_
        automated match to d1ezvf_
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, sma, suc, umq
      2. 2255685Domain d3cx5r_: 3cx5 R: [157103]
        Other proteins in same PDB: d3cx5a1, d3cx5a2, d3cx5b1, d3cx5b2, d3cx5c1, d3cx5c2, d3cx5d1, d3cx5d2, d3cx5e1, d3cx5e2, d3cx5f_, d3cx5h_, d3cx5i_, d3cx5j_, d3cx5k_, d3cx5l1, d3cx5l2, d3cx5m1, d3cx5m2, d3cx5n1, d3cx5n2, d3cx5o1, d3cx5o2, d3cx5p1, d3cx5p2, d3cx5q_, d3cx5s_, d3cx5t_, d3cx5u_, d3cx5v_, d3cx5w_
        automated match to d1ezvf_
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, sma, suc, umq
    2. Domains for 3cxh:
      1. 2255686Domain d3cxhg_: 3cxh G: [157120]
        Other proteins in same PDB: d3cxha1, d3cxha2, d3cxhb1, d3cxhb2, d3cxhc1, d3cxhc2, d3cxhd1, d3cxhd2, d3cxhe1, d3cxhe2, d3cxhf_, d3cxhh_, d3cxhi_, d3cxhj_, d3cxhk_, d3cxhl1, d3cxhl2, d3cxhm1, d3cxhm2, d3cxhn1, d3cxhn2, d3cxho1, d3cxho2, d3cxhp1, d3cxhp2, d3cxhq_, d3cxhs_, d3cxht_, d3cxhu_, d3cxhv_, d3cxhw_
        automated match to d1ezvf_
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, sma, suc, umq
      2. 2255687Domain d3cxhr_: 3cxh R: [157136]
        Other proteins in same PDB: d3cxha1, d3cxha2, d3cxhb1, d3cxhb2, d3cxhc1, d3cxhc2, d3cxhd1, d3cxhd2, d3cxhe1, d3cxhe2, d3cxhf_, d3cxhh_, d3cxhi_, d3cxhj_, d3cxhk_, d3cxhl1, d3cxhl2, d3cxhm1, d3cxhm2, d3cxhn1, d3cxhn2, d3cxho1, d3cxho2, d3cxhp1, d3cxhp2, d3cxhq_, d3cxhs_, d3cxht_, d3cxhu_, d3cxhv_, d3cxhw_
        automated match to d1ezvf_
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, sma, suc, umq
    3. Domain for 4pd4:
  3. 2255689Chicken (Gallus gallus) [TaxId:9031] [189228] (8 PDB entries)
    1. Domains for 3h1h:
      1. 2255692Domain d3h1hf_: 3h1h F: [246422]
        Other proteins in same PDB: d3h1ha1, d3h1ha2, d3h1hb1, d3h1hb2, d3h1hc1, d3h1hc2, d3h1hd1, d3h1hd2, d3h1he1, d3h1he2, d3h1hg_, d3h1hh_, d3h1hj_, d3h1hn1, d3h1hn2, d3h1ho1, d3h1ho2, d3h1hp1, d3h1hp2, d3h1hq1, d3h1hq2, d3h1hr1, d3h1hr2, d3h1ht_, d3h1hu_, d3h1hw_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, pee, unl, uq
      2. 2255693Domain d3h1hs_: 3h1h S: [246434]
        Other proteins in same PDB: d3h1ha1, d3h1ha2, d3h1hb1, d3h1hb2, d3h1hc1, d3h1hc2, d3h1hd1, d3h1hd2, d3h1he1, d3h1he2, d3h1hg_, d3h1hh_, d3h1hj_, d3h1hn1, d3h1hn2, d3h1ho1, d3h1ho2, d3h1hp1, d3h1hp2, d3h1hq1, d3h1hq2, d3h1hr1, d3h1hr2, d3h1ht_, d3h1hu_, d3h1hw_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, pee, unl, uq
    2. Domains for 3h1j:
      1. 2255690Domain d3h1jf_: 3h1j F: [246446]
        Other proteins in same PDB: d3h1ja1, d3h1ja2, d3h1jb1, d3h1jb2, d3h1jc1, d3h1jc2, d3h1jd1, d3h1jd2, d3h1je1, d3h1je2, d3h1jg_, d3h1jh_, d3h1jj_, d3h1jn1, d3h1jn2, d3h1jo1, d3h1jo2, d3h1jp1, d3h1jp2, d3h1jq1, d3h1jq2, d3h1jr1, d3h1jr2, d3h1jt_, d3h1ju_, d3h1jw_
        automated match to d1l0lf_
        complexed with cdl, fes, gol, hec, hem, pee, plc, sma, unl, uq
      2. 2255691Domain d3h1js_: 3h1j S: [246458]
        Other proteins in same PDB: d3h1ja1, d3h1ja2, d3h1jb1, d3h1jb2, d3h1jc1, d3h1jc2, d3h1jd1, d3h1jd2, d3h1je1, d3h1je2, d3h1jg_, d3h1jh_, d3h1jj_, d3h1jn1, d3h1jn2, d3h1jo1, d3h1jo2, d3h1jp1, d3h1jp2, d3h1jq1, d3h1jq2, d3h1jr1, d3h1jr2, d3h1jt_, d3h1ju_, d3h1jw_
        automated match to d1l0lf_
        complexed with cdl, fes, gol, hec, hem, pee, plc, sma, unl, uq
    3. Domains for 3l70:
      1. 2255700Domain d3l70f_: 3l70 F: [180009]
        Other proteins in same PDB: d3l70a1, d3l70a2, d3l70b1, d3l70b2, d3l70c1, d3l70c2, d3l70d1, d3l70d2, d3l70e1, d3l70e2, d3l70g_, d3l70h_, d3l70j_, d3l70n1, d3l70o1, d3l70o2, d3l70p1, d3l70p2, d3l70q1, d3l70q2, d3l70r1, d3l70r2, d3l70t_, d3l70u_, d3l70w_
        automated match to d1sqpf1
        complexed with bog, cdl, fes, gol, hec, hem, jzv, pee, uq
      2. 2255701Domain d3l70s_: 3l70 S: [180013]
        Other proteins in same PDB: d3l70a1, d3l70a2, d3l70b1, d3l70b2, d3l70c1, d3l70c2, d3l70d1, d3l70d2, d3l70e1, d3l70e2, d3l70g_, d3l70h_, d3l70j_, d3l70n1, d3l70o1, d3l70o2, d3l70p1, d3l70p2, d3l70q1, d3l70q2, d3l70r1, d3l70r2, d3l70t_, d3l70u_, d3l70w_
        automated match to d1sqpf1
        complexed with bog, cdl, fes, gol, hec, hem, jzv, pee, uq
    4. Domains for 3l71:
      1. 2255698Domain d3l71f_: 3l71 F: [180017]
        Other proteins in same PDB: d3l71a1, d3l71a2, d3l71b1, d3l71b2, d3l71c1, d3l71c2, d3l71d1, d3l71e1, d3l71e2, d3l71g_, d3l71h_, d3l71j_, d3l71n1, d3l71n2, d3l71o1, d3l71o2, d3l71p1, d3l71p2, d3l71q1, d3l71q2, d3l71r1, d3l71r2, d3l71t_, d3l71u_, d3l71w_
        automated match to d1sqpf1
        complexed with azo, bog, cdl, fes, gol, hec, hem, pee, uq
      2. 2255699Domain d3l71s_: 3l71 S: [180021]
        Other proteins in same PDB: d3l71a1, d3l71a2, d3l71b1, d3l71b2, d3l71c1, d3l71c2, d3l71d1, d3l71e1, d3l71e2, d3l71g_, d3l71h_, d3l71j_, d3l71n1, d3l71n2, d3l71o1, d3l71o2, d3l71p1, d3l71p2, d3l71q1, d3l71q2, d3l71r1, d3l71r2, d3l71t_, d3l71u_, d3l71w_
        automated match to d1sqpf1
        complexed with azo, bog, cdl, fes, gol, hec, hem, pee, uq
    5. Domains for 3l72:
      1. 2255704Domain d3l72f_: 3l72 F: [247372]
        Other proteins in same PDB: d3l72a1, d3l72a2, d3l72b1, d3l72b2, d3l72c1, d3l72c2, d3l72d1, d3l72d2, d3l72e1, d3l72e2, d3l72g_, d3l72h_, d3l72j_, d3l72n1, d3l72n2, d3l72o1, d3l72o2, d3l72p1, d3l72p2, d3l72q1, d3l72q2, d3l72r1, d3l72r2, d3l72t_, d3l72u_, d3l72w_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, ikr, pee, uq
      2. 2255705Domain d3l72s_: 3l72 S: [247384]
        Other proteins in same PDB: d3l72a1, d3l72a2, d3l72b1, d3l72b2, d3l72c1, d3l72c2, d3l72d1, d3l72d2, d3l72e1, d3l72e2, d3l72g_, d3l72h_, d3l72j_, d3l72n1, d3l72n2, d3l72o1, d3l72o2, d3l72p1, d3l72p2, d3l72q1, d3l72q2, d3l72r1, d3l72r2, d3l72t_, d3l72u_, d3l72w_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, ikr, pee, uq
    6. Domains for 3l73:
      1. 2255702Domain d3l73f_: 3l73 F: [247396]
        Other proteins in same PDB: d3l73a1, d3l73a2, d3l73b1, d3l73b2, d3l73c1, d3l73c2, d3l73d1, d3l73d2, d3l73e1, d3l73e2, d3l73g_, d3l73h_, d3l73j_, d3l73n1, d3l73n2, d3l73o1, d3l73o2, d3l73p1, d3l73p2, d3l73q1, d3l73q2, d3l73r1, d3l73r2, d3l73t_, d3l73u_, d3l73w_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, jzz, pee, uq
      2. 2255703Domain d3l73s_: 3l73 S: [247408]
        Other proteins in same PDB: d3l73a1, d3l73a2, d3l73b1, d3l73b2, d3l73c1, d3l73c2, d3l73d1, d3l73d2, d3l73e1, d3l73e2, d3l73g_, d3l73h_, d3l73j_, d3l73n1, d3l73n2, d3l73o1, d3l73o2, d3l73p1, d3l73p2, d3l73q1, d3l73q2, d3l73r1, d3l73r2, d3l73t_, d3l73u_, d3l73w_
        automated match to d1l0lf_
        complexed with bog, cdl, fes, gol, hec, hem, jzz, pee, uq
    7. Domains for 3l74:
      1. 2255696Domain d3l74f_: 3l74 F: [180025]
        Other proteins in same PDB: d3l74a1, d3l74a2, d3l74b1, d3l74b2, d3l74c1, d3l74c2, d3l74d1, d3l74d2, d3l74e1, d3l74e2, d3l74g_, d3l74h_, d3l74j_, d3l74n1, d3l74n2, d3l74o1, d3l74o2, d3l74p1, d3l74p2, d3l74q1, d3l74q2, d3l74r1, d3l74r2, d3l74t_, d3l74u_, d3l74w_
        automated match to d1sqpf1
        complexed with azi, bog, cdl, fes, fmx, hec, hem, pee, unl, uq
      2. 2255697Domain d3l74s_: 3l74 S: [180029]
        Other proteins in same PDB: d3l74a1, d3l74a2, d3l74b1, d3l74b2, d3l74c1, d3l74c2, d3l74d1, d3l74d2, d3l74e1, d3l74e2, d3l74g_, d3l74h_, d3l74j_, d3l74n1, d3l74n2, d3l74o1, d3l74o2, d3l74p1, d3l74p2, d3l74q1, d3l74q2, d3l74r1, d3l74r2, d3l74t_, d3l74u_, d3l74w_
        automated match to d1sqpf1
        complexed with azi, bog, cdl, fes, fmx, hec, hem, pee, unl, uq
    8. Domains for 3l75:
      1. 2255694Domain d3l75f_: 3l75 F: [180033]
        Other proteins in same PDB: d3l75a1, d3l75a2, d3l75b1, d3l75b2, d3l75c1, d3l75c2, d3l75d1, d3l75d2, d3l75e1, d3l75e2, d3l75g_, d3l75h_, d3l75j_, d3l75n1, d3l75n2, d3l75o1, d3l75o2, d3l75p1, d3l75p2, d3l75q1, d3l75q2, d3l75r1, d3l75r2, d3l75t_, d3l75u_, d3l75w_
        automated match to d1sqpf1
        complexed with azi, bog, cdl, fes, fnm, hec, hem, pee, unl, uq
      2. 2255695Domain d3l75s_: 3l75 S: [180037]
        Other proteins in same PDB: d3l75a1, d3l75a2, d3l75b1, d3l75b2, d3l75c1, d3l75c2, d3l75d1, d3l75d2, d3l75e1, d3l75e2, d3l75g_, d3l75h_, d3l75j_, d3l75n1, d3l75n2, d3l75o1, d3l75o2, d3l75p1, d3l75p2, d3l75q1, d3l75q2, d3l75r1, d3l75r2, d3l75t_, d3l75u_, d3l75w_
        automated match to d1sqpf1
        complexed with azi, bog, cdl, fes, fnm, hec, hem, pee, unl, uq
  4. 2255706Cow (Bos taurus) [TaxId:9913] [192447] (4 PDB entries)
    1. Domain for 1sqv:
    2. Domain for 1sqx:
    3. Domains for 2a06:
      1. 2255707Domain d2a06f_: 2a06 F: [125925]
        Other proteins in same PDB: d2a06a1, d2a06a2, d2a06b1, d2a06b2, d2a06c1, d2a06c2, d2a06d1, d2a06d2, d2a06e1, d2a06e2, d2a06g_, d2a06h_, d2a06i_, d2a06j_, d2a06n1, d2a06n2, d2a06o1, d2a06o2, d2a06p1, d2a06p2, d2a06q1, d2a06q2, d2a06r1, d2a06r2, d2a06t_, d2a06u_, d2a06v_, d2a06w_
        automated match to d1qcrf_
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
      2. 2255708Domain d2a06s_: 2a06 S: [125934]
        Other proteins in same PDB: d2a06a1, d2a06a2, d2a06b1, d2a06b2, d2a06c1, d2a06c2, d2a06d1, d2a06d2, d2a06e1, d2a06e2, d2a06g_, d2a06h_, d2a06i_, d2a06j_, d2a06n1, d2a06n2, d2a06o1, d2a06o2, d2a06p1, d2a06p2, d2a06q1, d2a06q2, d2a06r1, d2a06r2, d2a06t_, d2a06u_, d2a06v_, d2a06w_
        automated match to d1qcrf_
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
    4. Domain for 2fyu:

More info for Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Timeline for Protein automated matches from f.27.1.1: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase):