Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1976410Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1976411Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1976412Family a.1.1.1: Truncated hemoglobin [46459] (2 protein domains)
    lack the first helix (A)
  6. 1976472Protein automated matches [190322] (4 species)
    not a true protein

Species:

  1. 1976473Geobacillus stearothermophilus [TaxId:1422] [187467] (1 PDB entry)
  2. 1976476Synechococcus sp. [TaxId:32049] [194261] (4 PDB entries)
    1. Domain for 2ksc:
    2. Domains for 4i0v:
      1. 1976477Domain d4i0va_: 4i0v A: [307530]
        automated match to d4maxa_
        complexed with heb, so4
      2. 1976478Domain d4i0vb_: 4i0v B: [307531]
        automated match to d4maxa_
        complexed with heb, so4
      3. 1976479Domain d4i0vc_: 4i0v C: [307532]
        automated match to d4maxa_
        complexed with heb, so4
    3. Domains for 4l2m:
      1. 1976483Domain d4l2ma_: 4l2m A: [197344]
        automated match to d4i0vb_
        complexed with cyn, heb, so4
      2. 1976484Domain d4l2mb_: 4l2m B: [197421]
        automated match to d4i0vb_
        complexed with cyn, heb, so4
    4. Domains for 4max:
      1. 1976480Domain d4maxa_: 4max A: [227623]
        automated match to d4l2mb_
        complexed with heb, so4
      2. 1976481Domain d4maxb_: 4max B: [227624]
        automated match to d4l2mb_
        complexed with heb, so4
      3. 1976482Domain d4maxc_: 4max C: [227625]
        automated match to d4l2mb_
        complexed with heb, so4
  3. 1976486Thermobifida fusca [TaxId:2021] [187474] (1 PDB entry)
  4. 2289733Bacillus anthracis [TaxId:1392] [333034] (3 PDB entries)
    1. Domains for 5v3t:
      1. 2289734Domain d5v3ta_: 5v3t A: [333035]
        automated match to d2bkma_
        complexed with cyn, hem, so4
      2. 2289779Domain d5v3tb_: 5v3t B: [333080]
        automated match to d2bkma_
        complexed with cyn, hem, so4
    2. Domains for 5v3u:
      1. 2290245Domain d5v3ua_: 5v3u A: [333546]
        automated match to d2bkma_
        complexed with cyn, hem, so4; mutant
      2. 2290247Domain d5v3ub_: 5v3u B: [333548]
        automated match to d2bkma_
        complexed with cyn, hem, so4; mutant
    3. Domains for 5v3v:
      1. 2289767Domain d5v3va_: 5v3v A: [333068]
        automated match to d2bkma_
        complexed with cyn, hem, so4; mutant
      2. 2289769Domain d5v3vb_: 5v3v B: [333070]
        automated match to d2bkma_
        complexed with cyn, hem, so4; mutant

More info for Protein automated matches from a.1.1.1: Truncated hemoglobin

Timeline for Protein automated matches from a.1.1.1: Truncated hemoglobin: