Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1866060Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 1866061Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 1866062Family c.67.1.1: AAT-like [53384] (17 proteins)
  6. 1866405Protein automated matches [190317] (4 species)
    not a true protein

Species:

  1. 1866406Escherichia coli K-12 [TaxId:83333] [196886] (8 PDB entries)
    1. Domains for 4f5f:
      1. 1866421Domain d4f5fa_: 4f5f A: [196888]
        automated match to d1aama_
      2. 1866422Domain d4f5fb_: 4f5f B: [201998]
        automated match to d4f5fa_
    2. Domains for 4f5g:
      1. 1866411Domain d4f5ga_: 4f5g A: [201999]
        automated match to d4f5gb_
        mutant
      2. 1866412Domain d4f5gb_: 4f5g B: [196887]
        automated match to d1aama_
        mutant
    3. Domains for 4f5h:
      1. 1866409Domain d4f5ha_: 4f5h A: [202000]
        automated match to d4f5hb_
      2. 1866410Domain d4f5hb_: 4f5h B: [196889]
        automated match to d1aama_
    4. Domains for 4f5i:
      1. 1866417Domain d4f5ia_: 4f5i A: [196892]
        automated match to d1aama_
        complexed with mpd
      2. 1866418Domain d4f5ib_: 4f5i B: [202001]
        automated match to d4f5ia_
        complexed with mpd
    5. Domains for 4f5j:
      1. 1866415Domain d4f5ja_: 4f5j A: [196891]
        automated match to d1aama_
        mutant
      2. 1866416Domain d4f5jb_: 4f5j B: [202002]
        automated match to d4f5ja_
        mutant
    6. Domains for 4f5k:
      1. 1866419Domain d4f5ka_: 4f5k A: [202003]
        automated match to d4f5kb_
      2. 1866420Domain d4f5kb_: 4f5k B: [196890]
        automated match to d1aama_
    7. Domains for 4f5l:
      1. 1866407Domain d4f5la_: 4f5l A: [197086]
        automated match to d1aama_
        complexed with edo; mutant
      2. 1866408Domain d4f5lb_: 4f5l B: [202004]
        automated match to d4f5la_
        complexed with edo; mutant
    8. Domains for 4f5m:
      1. 1866413Domain d4f5ma_: 4f5m A: [202005]
        automated match to d4f5mb_
        complexed with edo
      2. 1866414Domain d4f5mb_: 4f5m B: [196893]
        automated match to d1aama_
        complexed with edo
  2. 1866423Garlic (Allium sativum) [TaxId:4682] [187134] (2 PDB entries)
    1. Domain for 2hor:
    2. Domains for 2hox:
      1. 1866424Domain d2hoxa_: 2hox A: [136644]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      2. 1866425Domain d2hoxb_: 2hox B: [136645]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      3. 1866426Domain d2hoxc_: 2hox C: [136646]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      4. 1866427Domain d2hoxd_: 2hox D: [136647]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
  3. 1866429Human (Homo sapiens) [TaxId:9606] [188901] (7 PDB entries)
    1. Domains for 3fvs:
      1. 1866432Domain d3fvsa_: 3fvs A: [176084]
        automated match to d1w7la_
        complexed with gol, na
      2. 1866433Domain d3fvsb_: 3fvs B: [176085]
        automated match to d1w7la_
        complexed with gol, na
    2. Domains for 3fvu:
      1. 1866436Domain d3fvua_: 3fvu A: [176087]
        automated match to d1w7la_
        complexed with gol, iac, na
      2. 1866437Domain d3fvub_: 3fvu B: [176088]
        automated match to d1w7la_
        complexed with gol, iac, na
    3. Domains for 3fvx:
      1. 1866434Domain d3fvxa_: 3fvx A: [176089]
        automated match to d1w7la_
        complexed with na, trs
      2. 1866435Domain d3fvxb_: 3fvx B: [176090]
        automated match to d1w7la_
        complexed with na, trs
    4. Domain for 3wzf:
    5. Domains for 4wlh:
      1. 1866430Domain d4wlha_: 4wlh A: [267583]
        automated match to d3fvsa_
        complexed with it1
      2. 1866431Domain d4wlhb_: 4wlh B: [267584]
        automated match to d3fvsa_
        complexed with it1
    6. Domains for 4wlj:
      1. 1866438Domain d4wlja_: 4wlj A: [262114]
        automated match to d3fvsa_
        complexed with ik2
      2. 1866439Domain d4wljb_: 4wlj B: [261480]
        automated match to d3fvsa_
        complexed with ik2
    7. Domains for 4wp0:
      1. 1866440Domain d4wp0a_: 4wp0 A: [261184]
        automated match to d3fvsa_
      2. 1866441Domain d4wp0b_: 4wp0 B: [261185]
        automated match to d3fvsa_
      3. 1866442Domain d4wp0c_: 4wp0 C: [264135]
        automated match to d4wp0a_
      4. 1866443Domain d4wp0d_: 4wp0 D: [264136]
        automated match to d4wp0a_
  4. 1866445Mouse (Mus musculus) [TaxId:10090] [189353] (3 PDB entries)
    1. Domains for 3hlm:
      1. 1866454Domain d3hlma_: 3hlm A: [177674]
        automated match to d1akaa_
        complexed with gol
      2. 1866455Domain d3hlmb_: 3hlm B: [177675]
        automated match to d1akaa_
        complexed with gol
      3. 1866456Domain d3hlmc_: 3hlm C: [177676]
        automated match to d1akaa_
        complexed with gol
      4. 1866457Domain d3hlmd_: 3hlm D: [177677]
        automated match to d1akaa_
        complexed with gol
    2. Domains for 3pd6:
      1. 1866450Domain d3pd6a_: 3pd6 A: [183659]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      2. 1866451Domain d3pd6b_: 3pd6 B: [183660]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      3. 1866452Domain d3pd6c_: 3pd6 C: [183661]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      4. 1866453Domain d3pd6d_: 3pd6 D: [183662]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
    3. Domains for 3pdb:
      1. 1866446Domain d3pdba_: 3pdb A: [183668]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      2. 1866447Domain d3pdbb_: 3pdb B: [183669]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      3. 1866448Domain d3pdbc_: 3pdb C: [183670]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      4. 1866449Domain d3pdbd_: 3pdb D: [183671]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp

More info for Protein automated matches from c.67.1.1: AAT-like

Timeline for Protein automated matches from c.67.1.1: AAT-like: