Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2470823Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2470824Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2470825Family c.67.1.1: AAT-like [53384] (17 protein domains)
  6. 2471191Protein automated matches [190317] (4 species)
    not a true protein

Species:

  1. 2471192Escherichia coli K-12 [TaxId:83333] [196886] (8 PDB entries)
    1. Domains for 4f5f:
      1. 2471207Domain d4f5fa1: 4f5f A:12-406 [196888]
        Other proteins in same PDB: d4f5fa2, d4f5fb2
        automated match to d1aama_
      2. 2471208Domain d4f5fb1: 4f5f B:12-406 [201998]
        Other proteins in same PDB: d4f5fa2, d4f5fb2
        automated match to d4f5fa_
    2. Domains for 4f5g:
      1. 2471197Domain d4f5ga1: 4f5g A:12-406 [201999]
        Other proteins in same PDB: d4f5ga2, d4f5gb2
        automated match to d4f5gb_
        mutant
      2. 2471198Domain d4f5gb1: 4f5g B:12-406 [196887]
        Other proteins in same PDB: d4f5ga2, d4f5gb2
        automated match to d1aama_
        mutant
    3. Domains for 4f5h:
      1. 2471195Domain d4f5ha1: 4f5h A:12-406 [202000]
        Other proteins in same PDB: d4f5ha2, d4f5hb2
        automated match to d4f5hb_
      2. 2471196Domain d4f5hb1: 4f5h B:12-406 [196889]
        Other proteins in same PDB: d4f5ha2, d4f5hb2
        automated match to d1aama_
    4. Domains for 4f5i:
      1. 2471203Domain d4f5ia1: 4f5i A:12-406 [196892]
        Other proteins in same PDB: d4f5ia2, d4f5ib2
        automated match to d1aama_
        complexed with mpd
      2. 2471204Domain d4f5ib1: 4f5i B:12-406 [202001]
        Other proteins in same PDB: d4f5ia2, d4f5ib2
        automated match to d4f5ia_
        complexed with mpd
    5. Domains for 4f5j:
      1. 2471201Domain d4f5ja1: 4f5j A:12-406 [196891]
        Other proteins in same PDB: d4f5ja2, d4f5jb2
        automated match to d1aama_
        mutant
      2. 2471202Domain d4f5jb1: 4f5j B:12-406 [202002]
        Other proteins in same PDB: d4f5ja2, d4f5jb2
        automated match to d4f5ja_
        mutant
    6. Domains for 4f5k:
      1. 2471205Domain d4f5ka1: 4f5k A:12-406 [202003]
        Other proteins in same PDB: d4f5ka2, d4f5kb2
        automated match to d4f5kb_
      2. 2471206Domain d4f5kb1: 4f5k B:12-406 [196890]
        Other proteins in same PDB: d4f5ka2, d4f5kb2
        automated match to d1aama_
    7. Domains for 4f5l:
      1. 2471193Domain d4f5la1: 4f5l A:12-406 [197086]
        Other proteins in same PDB: d4f5la2, d4f5lb2
        automated match to d1aama_
        complexed with edo; mutant
      2. 2471194Domain d4f5lb1: 4f5l B:12-406 [202004]
        Other proteins in same PDB: d4f5la2, d4f5lb2
        automated match to d4f5la_
        complexed with edo; mutant
    8. Domains for 4f5m:
      1. 2471199Domain d4f5ma1: 4f5m A:12-406 [202005]
        Other proteins in same PDB: d4f5ma2, d4f5mb2
        automated match to d4f5mb_
        complexed with edo
      2. 2471200Domain d4f5mb1: 4f5m B:12-405 [196893]
        Other proteins in same PDB: d4f5ma2, d4f5mb2
        automated match to d1aama_
        complexed with edo
  2. 2471209Garlic (Allium sativum) [TaxId:4682] [187134] (2 PDB entries)
    1. Domain for 2hor:
    2. Domains for 2hox:
      1. 2471210Domain d2hoxa_: 2hox A: [136644]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      2. 2471211Domain d2hoxb_: 2hox B: [136645]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      3. 2471212Domain d2hoxc_: 2hox C: [136646]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      4. 2471213Domain d2hoxd_: 2hox D: [136647]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
  3. 2471215Human (Homo sapiens) [TaxId:9606] [188901] (7 PDB entries)
    1. Domains for 3fvs:
      1. 2471216Domain d3fvsa_: 3fvs A: [176084]
        automated match to d1w7la_
        complexed with gol, na
      2. 2471217Domain d3fvsb_: 3fvs B: [176085]
        automated match to d1w7la_
        complexed with gol, na
    2. Domains for 3fvu:
      1. 2471220Domain d3fvua_: 3fvu A: [176087]
        automated match to d1w7la_
        complexed with gol, iac, na
      2. 2471221Domain d3fvub_: 3fvu B: [176088]
        automated match to d1w7la_
        complexed with gol, iac, na
    3. Domains for 3fvx:
      1. 2471218Domain d3fvxa_: 3fvx A: [176089]
        automated match to d1w7la_
        complexed with na, trs
      2. 2471219Domain d3fvxb_: 3fvx B: [176090]
        automated match to d1w7la_
        complexed with na, trs
    4. Domains for 4wlh:
      1. 2471222Domain d4wlha_: 4wlh A: [267583]
        automated match to d3fvsa_
      2. 2471223Domain d4wlhb_: 4wlh B: [267584]
        automated match to d3fvsa_
    5. Domains for 4wlj:
      1. 2471224Domain d4wlja_: 4wlj A: [262114]
        automated match to d3fvsa_
        complexed with ik2
      2. 2471225Domain d4wljb_: 4wlj B: [261480]
        automated match to d3fvsa_
        complexed with ik2
    6. Domains for 4wp0:
      1. 2471226Domain d4wp0a1: 4wp0 A:4-422 [261184]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d3fvsa_
      2. 2471227Domain d4wp0b1: 4wp0 B:4-422 [261185]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d3fvsa_
      3. 2471228Domain d4wp0c_: 4wp0 C: [264135]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d4wp0a_
      4. 2471229Domain d4wp0d1: 4wp0 D:4-422 [264136]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d4wp0a_
    7. Domains for 5ax8:
      1. 2471230Domain d5ax8a_: 5ax8 A: [312840]
        automated match to d7aata_
      2. 2471231Domain d5ax8b_: 5ax8 B: [312765]
        automated match to d7aata_
      3. 2471232Domain d5ax8c_: 5ax8 C: [312929]
        automated match to d7aata_
      4. 2471233Domain d5ax8d_: 5ax8 D: [312965]
        automated match to d7aata_
  4. 2471234Mouse (Mus musculus) [TaxId:10090] [189353] (3 PDB entries)
    1. Domains for 3hlm:
      1. 2471243Domain d3hlma_: 3hlm A: [177674]
        automated match to d1akaa_
        complexed with gol
      2. 2471244Domain d3hlmb_: 3hlm B: [177675]
        automated match to d1akaa_
        complexed with gol
      3. 2471245Domain d3hlmc_: 3hlm C: [177676]
        automated match to d1akaa_
        complexed with gol
      4. 2471246Domain d3hlmd_: 3hlm D: [177677]
        automated match to d1akaa_
        complexed with gol
    2. Domains for 3pd6:
      1. 2471239Domain d3pd6a_: 3pd6 A: [183659]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      2. 2471240Domain d3pd6b_: 3pd6 B: [183660]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      3. 2471241Domain d3pd6c_: 3pd6 C: [183661]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      4. 2471242Domain d3pd6d_: 3pd6 D: [183662]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
    3. Domains for 3pdb:
      1. 2471235Domain d3pdba_: 3pdb A: [183668]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      2. 2471236Domain d3pdbb_: 3pdb B: [183669]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      3. 2471237Domain d3pdbc_: 3pdb C: [183670]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      4. 2471238Domain d3pdbd_: 3pdb D: [183671]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp

More info for Protein automated matches from c.67.1.1: AAT-like

Timeline for Protein automated matches from c.67.1.1: AAT-like: