Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2130992Family c.67.1.1: AAT-like [53384] (17 protein domains)
  6. 2131336Protein automated matches [190317] (5 species)
    not a true protein

Species:

  1. 2131337Escherichia coli K-12 [TaxId:83333] [196886] (8 PDB entries)
    1. Domains for 4f5f:
      1. 2131352Domain d4f5fa1: 4f5f A:12-406 [196888]
        Other proteins in same PDB: d4f5fa2, d4f5fb2
        automated match to d1aama_
      2. 2131353Domain d4f5fb1: 4f5f B:12-406 [201998]
        Other proteins in same PDB: d4f5fa2, d4f5fb2
        automated match to d4f5fa_
    2. Domains for 4f5g:
      1. 2131342Domain d4f5ga1: 4f5g A:12-406 [201999]
        Other proteins in same PDB: d4f5ga2, d4f5gb2
        automated match to d4f5gb_
        mutant
      2. 2131343Domain d4f5gb1: 4f5g B:12-406 [196887]
        Other proteins in same PDB: d4f5ga2, d4f5gb2
        automated match to d1aama_
        mutant
    3. Domains for 4f5h:
      1. 2131340Domain d4f5ha1: 4f5h A:12-406 [202000]
        Other proteins in same PDB: d4f5ha2, d4f5hb2
        automated match to d4f5hb_
      2. 2131341Domain d4f5hb1: 4f5h B:12-406 [196889]
        Other proteins in same PDB: d4f5ha2, d4f5hb2
        automated match to d1aama_
    4. Domains for 4f5i:
      1. 2131348Domain d4f5ia1: 4f5i A:12-406 [196892]
        Other proteins in same PDB: d4f5ia2, d4f5ib2
        automated match to d1aama_
        complexed with mpd
      2. 2131349Domain d4f5ib1: 4f5i B:12-406 [202001]
        Other proteins in same PDB: d4f5ia2, d4f5ib2
        automated match to d4f5ia_
        complexed with mpd
    5. Domains for 4f5j:
      1. 2131346Domain d4f5ja1: 4f5j A:12-406 [196891]
        Other proteins in same PDB: d4f5ja2, d4f5jb2
        automated match to d1aama_
        mutant
      2. 2131347Domain d4f5jb1: 4f5j B:12-406 [202002]
        Other proteins in same PDB: d4f5ja2, d4f5jb2
        automated match to d4f5ja_
        mutant
    6. Domains for 4f5k:
      1. 2131350Domain d4f5ka1: 4f5k A:12-406 [202003]
        Other proteins in same PDB: d4f5ka2, d4f5kb2
        automated match to d4f5kb_
      2. 2131351Domain d4f5kb1: 4f5k B:12-406 [196890]
        Other proteins in same PDB: d4f5ka2, d4f5kb2
        automated match to d1aama_
    7. Domains for 4f5l:
      1. 2131338Domain d4f5la1: 4f5l A:12-406 [197086]
        Other proteins in same PDB: d4f5la2, d4f5lb2
        automated match to d1aama_
        complexed with edo; mutant
      2. 2131339Domain d4f5lb1: 4f5l B:12-406 [202004]
        Other proteins in same PDB: d4f5la2, d4f5lb2
        automated match to d4f5la_
        complexed with edo; mutant
    8. Domains for 4f5m:
      1. 2131344Domain d4f5ma1: 4f5m A:12-406 [202005]
        Other proteins in same PDB: d4f5ma2, d4f5mb2
        automated match to d4f5mb_
        complexed with edo
      2. 2131345Domain d4f5mb1: 4f5m B:12-405 [196893]
        Other proteins in same PDB: d4f5ma2, d4f5mb2
        automated match to d1aama_
        complexed with edo
  2. 2131354Garlic (Allium sativum) [TaxId:4682] [187134] (2 PDB entries)
    1. Domain for 2hor:
    2. Domains for 2hox:
      1. 2131355Domain d2hoxa_: 2hox A: [136644]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      2. 2131356Domain d2hoxb_: 2hox B: [136645]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      3. 2131357Domain d2hoxc_: 2hox C: [136646]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
      4. 2131358Domain d2hoxd_: 2hox D: [136647]
        automated match to d1lk9b_
        complexed with cl, nag, p1t
  3. 2131360Human (Homo sapiens) [TaxId:9606] [188901] (8 PDB entries)
    1. Domains for 3fvs:
      1. 2131363Domain d3fvsa_: 3fvs A: [176084]
        automated match to d1w7la_
        complexed with gol, na
      2. 2131364Domain d3fvsb_: 3fvs B: [176085]
        automated match to d1w7la_
        complexed with gol, na
    2. Domains for 3fvu:
      1. 2131367Domain d3fvua_: 3fvu A: [176087]
        automated match to d1w7la_
        complexed with gol, iac, na
      2. 2131368Domain d3fvub_: 3fvu B: [176088]
        automated match to d1w7la_
        complexed with gol, iac, na
    3. Domains for 3fvx:
      1. 2131365Domain d3fvxa_: 3fvx A: [176089]
        automated match to d1w7la_
        complexed with na, trs
      2. 2131366Domain d3fvxb_: 3fvx B: [176090]
        automated match to d1w7la_
        complexed with na, trs
    4. Domain for 3wzf:
    5. Domains for 4wlh:
      1. 2131361Domain d4wlha_: 4wlh A: [267583]
        automated match to d3fvsa_
        complexed with it1
      2. 2131362Domain d4wlhb_: 4wlh B: [267584]
        automated match to d3fvsa_
        complexed with it1
    6. Domains for 4wlj:
      1. 2131369Domain d4wlja_: 4wlj A: [262114]
        automated match to d3fvsa_
        complexed with ik2
      2. 2131370Domain d4wljb_: 4wlj B: [261480]
        automated match to d3fvsa_
        complexed with ik2
    7. Domains for 4wp0:
      1. 2131371Domain d4wp0a1: 4wp0 A:4-422 [261184]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d3fvsa_
      2. 2131372Domain d4wp0b1: 4wp0 B:4-422 [261185]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d3fvsa_
      3. 2131373Domain d4wp0c_: 4wp0 C: [264135]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d4wp0a_
      4. 2131374Domain d4wp0d1: 4wp0 D:4-422 [264136]
        Other proteins in same PDB: d4wp0a2, d4wp0b2, d4wp0d2
        automated match to d4wp0a_
    8. Domains for 5ax8:
      1. 2269459Domain d5ax8b_: 5ax8 B: [312765]
        automated match to d7aata_
      2. 2269535Domain d5ax8a_: 5ax8 A: [312840]
        automated match to d7aata_
      3. 2269624Domain d5ax8c_: 5ax8 C: [312929]
        automated match to d7aata_
      4. 2269660Domain d5ax8d_: 5ax8 D: [312965]
        automated match to d7aata_
  4. 2131376Mouse (Mus musculus) [TaxId:10090] [189353] (3 PDB entries)
    1. Domains for 3hlm:
      1. 2131385Domain d3hlma_: 3hlm A: [177674]
        automated match to d1akaa_
        complexed with gol
      2. 2131386Domain d3hlmb_: 3hlm B: [177675]
        automated match to d1akaa_
        complexed with gol
      3. 2131387Domain d3hlmc_: 3hlm C: [177676]
        automated match to d1akaa_
        complexed with gol
      4. 2131388Domain d3hlmd_: 3hlm D: [177677]
        automated match to d1akaa_
        complexed with gol
    2. Domains for 3pd6:
      1. 2131381Domain d3pd6a_: 3pd6 A: [183659]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      2. 2131382Domain d3pd6b_: 3pd6 B: [183660]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      3. 2131383Domain d3pd6c_: 3pd6 C: [183661]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
      4. 2131384Domain d3pd6d_: 3pd6 D: [183662]
        automated match to d1akaa_
        complexed with gol, kyn, pmp
    3. Domains for 3pdb:
      1. 2131377Domain d3pdba_: 3pdb A: [183668]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      2. 2131378Domain d3pdbb_: 3pdb B: [183669]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      3. 2131379Domain d3pdbc_: 3pdb C: [183670]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
      4. 2131380Domain d3pdbd_: 3pdb D: [183671]
        automated match to d1akaa_
        complexed with bme, gol, oaa, pmp
  5. 2287144Sus scrofa [TaxId:9823] [330445] (5 PDB entries)
    1. Domains for 5ton:
      1. 2287157Domain d5tonb1: 5ton B:0-411 [330458]
        Other proteins in same PDB: d5tona2, d5tonb2
        automated match to d3wzfa_
        mutant
      2. 2287317Domain d5tona1: 5ton A:0-412 [330618]
        Other proteins in same PDB: d5tona2, d5tonb2
        automated match to d3wzfa_
        mutant
    2. Domains for 5toq:
      1. 2287145Domain d5toqa1: 5toq A:0-412 [330446]
        Other proteins in same PDB: d5toqa2, d5toqb2
        automated match to d3wzfa_
      2. 2287178Domain d5toqb1: 5toq B:0-411 [330479]
        Other proteins in same PDB: d5toqa2, d5toqb2
        automated match to d3wzfa_
    3. Domains for 5tor:
      1. 2287167Domain d5tora1: 5tor A:0-412 [330468]
        Other proteins in same PDB: d5tora2, d5torb2
        automated match to d3wzfa_
        mutant
      2. 2287173Domain d5torb1: 5tor B:0-411 [330474]
        Other proteins in same PDB: d5tora2, d5torb2
        automated match to d3wzfa_
        mutant
    4. Domains for 5tot:
      1. 2287162Domain d5totb1: 5tot B:0-411 [330463]
        Other proteins in same PDB: d5tota2, d5totb2
        automated match to d3wzfa_
        mutant
      2. 2287165Domain d5tota1: 5tot A:0-412 [330466]
        Other proteins in same PDB: d5tota2, d5totb2
        automated match to d3wzfa_
        mutant
    5. Domains for 5vk7:
      1. 2297743Domain d5vk7a1: 5vk7 A:0-412 [341044]
        Other proteins in same PDB: d5vk7a2, d5vk7b2
        automated match to d3wzfa_
      2. 2297763Domain d5vk7b1: 5vk7 B:0-410 [341064]
        Other proteins in same PDB: d5vk7a2, d5vk7b2
        automated match to d3wzfa_

More info for Protein automated matches from c.67.1.1: AAT-like

Timeline for Protein automated matches from c.67.1.1: AAT-like: