Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1959977Class g: Small proteins [56992] (92 folds)
  3. 1964111Fold g.21: Methylamine dehydrogenase, L chain [57560] (1 superfamily)
    disulfide-rich; nearly all-beta
  4. 1964112Superfamily g.21.1: Methylamine dehydrogenase, L chain [57561] (2 families) (S)
  5. 1964113Family g.21.1.1: Methylamine dehydrogenase, L chain [57562] (2 proteins)
    automatically mapped to Pfam PF02975
  6. 1964136Protein automated matches [190303] (3 species)
    not a true protein

Species:

  1. 1964137Paracoccus denitrificans [TaxId:266] [187112] (13 PDB entries)
    1. Domains for 2gc4:
      1. 1964144Domain d2gc4b_: 2gc4 B: [134935]
        Other proteins in same PDB: d2gc4a_, d2gc4c_, d2gc4d_, d2gc4e_, d2gc4g_, d2gc4h_, d2gc4i_, d2gc4k_, d2gc4l_, d2gc4m_, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      2. 1964145Domain d2gc4f_: 2gc4 F: [134939]
        Other proteins in same PDB: d2gc4a_, d2gc4c_, d2gc4d_, d2gc4e_, d2gc4g_, d2gc4h_, d2gc4i_, d2gc4k_, d2gc4l_, d2gc4m_, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      3. 1964146Domain d2gc4j_: 2gc4 J: [134943]
        Other proteins in same PDB: d2gc4a_, d2gc4c_, d2gc4d_, d2gc4e_, d2gc4g_, d2gc4h_, d2gc4i_, d2gc4k_, d2gc4l_, d2gc4m_, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      4. 1964147Domain d2gc4n_: 2gc4 N: [134947]
        Other proteins in same PDB: d2gc4a_, d2gc4c_, d2gc4d_, d2gc4e_, d2gc4g_, d2gc4h_, d2gc4i_, d2gc4k_, d2gc4l_, d2gc4m_, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
    2. Domains for 2gc7:
      1. 1964140Domain d2gc7b_: 2gc7 B: [134955]
        Other proteins in same PDB: d2gc7a_, d2gc7c_, d2gc7d_, d2gc7e_, d2gc7g_, d2gc7h_, d2gc7i_, d2gc7k_, d2gc7l_, d2gc7m_, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      2. 1964141Domain d2gc7f_: 2gc7 F: [134959]
        Other proteins in same PDB: d2gc7a_, d2gc7c_, d2gc7d_, d2gc7e_, d2gc7g_, d2gc7h_, d2gc7i_, d2gc7k_, d2gc7l_, d2gc7m_, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      3. 1964142Domain d2gc7j_: 2gc7 J: [134963]
        Other proteins in same PDB: d2gc7a_, d2gc7c_, d2gc7d_, d2gc7e_, d2gc7g_, d2gc7h_, d2gc7i_, d2gc7k_, d2gc7l_, d2gc7m_, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      4. 1964143Domain d2gc7n_: 2gc7 N: [134967]
        Other proteins in same PDB: d2gc7a_, d2gc7c_, d2gc7d_, d2gc7e_, d2gc7g_, d2gc7h_, d2gc7i_, d2gc7k_, d2gc7l_, d2gc7m_, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
    3. Domain for 2j55:
    4. Domains for 2j56:
      1. 1964148Domain d2j56l_: 2j56 L: [145650]
        Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h_, d2j56j_
        automated match to d1mg2b_
        complexed with cu, gol, na
      2. 1964149Domain d2j56m_: 2j56 M: [145651]
        Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h_, d2j56j_
        automated match to d1mg2b_
        complexed with cu, gol, na
    5. Domains for 2j57:
      1. 1964162Domain d2j57k_: 2j57 K: [145652]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g_, d2j57h_, d2j57i_, d2j57j_
        automated match to d1mg2b_
        complexed with cu
      2. 1964163Domain d2j57l_: 2j57 L: [145653]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g_, d2j57h_, d2j57i_, d2j57j_
        automated match to d1mg2b_
        complexed with cu
      3. 1964164Domain d2j57m_: 2j57 M: [145654]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g_, d2j57h_, d2j57i_, d2j57j_
        automated match to d1mg2b_
        complexed with cu
      4. 1964165Domain d2j57n_: 2j57 N: [145655]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g_, d2j57h_, d2j57i_, d2j57j_
        automated match to d1mg2b_
        complexed with cu
    6. Domains for 4fa1:
      1. 1964160Domain d4fa1c_: 4fa1 C: [192921]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na
      2. 1964161Domain d4fa1e_: 4fa1 E: [192651]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na
    7. Domains for 4fa4:
      1. 1964156Domain d4fa4c_: 4fa4 C: [192920]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge, po4
      2. 1964157Domain d4fa4e_: 4fa4 E: [192649]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge, po4
    8. Domains for 4fa5:
      1. 1964138Domain d4fa5c_: 4fa5 C: [192653]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na
      2. 1964139Domain d4fa5e_: 4fa5 E: [192923]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na
    9. Domains for 4fa9:
      1. 1964150Domain d4fa9c_: 4fa9 C: [192922]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge
      2. 1964151Domain d4fa9e_: 4fa9 E: [192652]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge
    10. Domains for 4fan:
      1. 1964154Domain d4fanc_: 4fan C: [192648]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, pge
      2. 1964155Domain d4fane_: 4fan E: [192650]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, pge
    11. Domains for 4fav:
      1. 1964152Domain d4favc_: 4fav C: [192924]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, pge
      2. 1964153Domain d4fave_: 4fav E: [192654]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, pge
    12. Domains for 4fb1:
      1. 1964158Domain d4fb1c_: 4fb1 C: [192925]
        automated match to d2bbkl_
        complexed with ca, hec, mes, na
      2. 1964159Domain d4fb1e_: 4fb1 E: [192672]
        automated match to d2bbkl_
        complexed with ca, hec, mes, na
    13. Domains for 4o1q:
      1. 1964167Domain d4o1qc_: 4o1q C: [257209]
        automated match to d4fa9e_
        complexed with ca, edo, hec, mes, na, pge, po4
      2. 1964168Domain d4o1qe_: 4o1q E: [263245]
        automated match to d4fa9e_
        complexed with ca, edo, hec, mes, na, pge, po4
  2. 1964169Paracoccus denitrificans [TaxId:318586] [189284] (19 PDB entries)
    1. Domains for 3l4m:
      1. 1964188Domain d3l4mc_: 3l4m C: [179938]
        Other proteins in same PDB: d3l4md_, d3l4mf_
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
      2. 1964189Domain d3l4me_: 3l4m E: [179939]
        Other proteins in same PDB: d3l4md_, d3l4mf_
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
    2. Domains for 3l4o:
      1. 1964194Domain d3l4oc_: 3l4o C: [179940]
        Other proteins in same PDB: d3l4od_, d3l4of_
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
      2. 1964195Domain d3l4oe_: 3l4o E: [179941]
        Other proteins in same PDB: d3l4od_, d3l4of_
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
    3. Domains for 3orv:
      1. 1964182Domain d3orvc_: 3orv C: [183251]
        Other proteins in same PDB: d3orvd_, d3orvf_
        automated match to d1mg2b_
        complexed with ca, edo, hec, p6g, peg, pg4, pge
      2. 1964183Domain d3orve_: 3orv E: [183252]
        Other proteins in same PDB: d3orvd_, d3orvf_
        automated match to d1mg2b_
        complexed with ca, edo, hec, p6g, peg, pg4, pge
    4. Domains for 3pxs:
      1. 1964204Domain d3pxsc_: 3pxs C: [184065]
        Other proteins in same PDB: d3pxsd_, d3pxsf_
        automated match to d1mg2b_
        complexed with act, ca, hec, na, pg4, pg6
      2. 1964205Domain d3pxse_: 3pxs E: [184066]
        Other proteins in same PDB: d3pxsd_, d3pxsf_
        automated match to d1mg2b_
        complexed with act, ca, hec, na, pg4, pg6
    5. Domains for 3pxt:
      1. 1964200Domain d3pxtc_: 3pxt C: [184067]
        Other proteins in same PDB: d3pxtd_, d3pxtf_
        automated match to d1mg2b_
        complexed with act, ca, cmo, hec, na, pg6
      2. 1964201Domain d3pxte_: 3pxt E: [184068]
        Other proteins in same PDB: d3pxtd_, d3pxtf_
        automated match to d1mg2b_
        complexed with act, ca, cmo, hec, na, pg6
    6. Domains for 3pxw:
      1. 1964198Domain d3pxwc_: 3pxw C: [184070]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, na, no, pg6, pge
      2. 1964199Domain d3pxwe_: 3pxw E: [184071]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, na, no, pg6, pge
    7. Domains for 3rlm:
      1. 1964202Domain d3rlmc_: 3rlm C: [185022]
        Other proteins in same PDB: d3rlmd_, d3rlmf_
        automated match to d1mg2b_
        complexed with act, ca, hec, pge
      2. 1964203Domain d3rlme_: 3rlm E: [185023]
        Other proteins in same PDB: d3rlmd_, d3rlmf_
        automated match to d1mg2b_
        complexed with act, ca, hec, pge
    8. Domains for 3rmz:
      1. 1964172Domain d3rmzc_: 3rmz C: [185036]
        Other proteins in same PDB: d3rmzd_, d3rmzf_
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
      2. 1964173Domain d3rmze_: 3rmz E: [185037]
        Other proteins in same PDB: d3rmzd_, d3rmzf_
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
    9. Domains for 3rn0:
      1. 1964192Domain d3rn0c_: 3rn0 C: [185038]
        Other proteins in same PDB: d3rn0d_, d3rn0f_
        automated match to d1mg2b_
        complexed with ca, hec, mes, na, p6g, pg4
      2. 1964193Domain d3rn0e_: 3rn0 E: [185039]
        Other proteins in same PDB: d3rn0d_, d3rn0f_
        automated match to d1mg2b_
        complexed with ca, hec, mes, na, p6g, pg4
    10. Domains for 3rn1:
      1. 1964184Domain d3rn1c_: 3rn1 C: [191980]
        Other proteins in same PDB: d3rn1d_, d3rn1f_
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, na, pg4
      2. 1964185Domain d3rn1e_: 3rn1 E: [191981]
        Other proteins in same PDB: d3rn1d_, d3rn1f_
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, na, pg4
    11. Domains for 3sjl:
      1. 1964170Domain d3sjlc_: 3sjl C: [192074]
        Other proteins in same PDB: d3sjld_, d3sjlf_
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, peg
      2. 1964171Domain d3sjle_: 3sjl E: [192075]
        Other proteins in same PDB: d3sjld_, d3sjlf_
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, peg
    12. Domains for 3sle:
      1. 1964206Domain d3slec_: 3sle C: [192076]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec
      2. 1964207Domain d3slee_: 3sle E: [192077]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec
    13. Domains for 3svw:
      1. 1964176Domain d3svwc_: 3svw C: [192085]
        Other proteins in same PDB: d3svwd_, d3svwf_
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, peg, pge
      2. 1964177Domain d3svwe_: 3svw E: [192086]
        Other proteins in same PDB: d3svwd_, d3svwf_
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, peg, pge
    14. Domains for 3sws:
      1. 1964180Domain d3swsc_: 3sws C: [192088]
        Other proteins in same PDB: d3swsd_, d3swsf_
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, mes, na, pg4
      2. 1964181Domain d3swse_: 3sws E: [192089]
        Other proteins in same PDB: d3swsd_, d3swsf_
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, mes, na, pg4
    15. Domains for 3sxt:
      1. 1964174Domain d3sxtc_: 3sxt C: [194900]
        Other proteins in same PDB: d3sxtd_, d3sxtf_
        automated match to d3rmzc_
        complexed with ca, edo, hec, na
      2. 1964175Domain d3sxte_: 3sxt E: [200733]
        Other proteins in same PDB: d3sxtd_, d3sxtf_
        automated match to d3sxtc_
        complexed with ca, edo, hec, na
    16. Domains for 4k3i:
      1. 1964186Domain d4k3ic_: 4k3i C: [224139]
        automated match to d3sxtc_
        complexed with act, ca, edo, hec, na
      2. 1964187Domain d4k3ie_: 4k3i E: [224140]
        automated match to d3sxtc_
        complexed with act, ca, edo, hec, na
    17. Domains for 4l1q:
      1. 1964190Domain d4l1qc_: 4l1q C: [227759]
        automated match to d3rlmc_
        complexed with ca, edo, hec, mes, na
      2. 1964191Domain d4l1qe_: 4l1q E: [227758]
        automated match to d3l4oc_
        complexed with ca, edo, hec, mes, na
    18. Domains for 4l3g:
      1. 1964196Domain d4l3gc_: 4l3g C: [227761]
        automated match to d3l4oc_
        complexed with act, ca, hec, na, pge
      2. 1964197Domain d4l3ge_: 4l3g E: [227760]
        automated match to d3l4oc_
        complexed with act, ca, hec, na, pge
    19. Domains for 4l3h:
      1. 1964178Domain d4l3hc_: 4l3h C: [227764]
        automated match to d3rlmc_
        complexed with ca, edo, hec, mes, na, pge
      2. 1964179Domain d4l3he_: 4l3h E: [227762]
        automated match to d3l4oc_
        complexed with ca, edo, hec, mes, na, pge
  3. 1964208Paracoccus versutus [TaxId:34007] [255772] (1 PDB entry)

More info for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain

Timeline for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain: