SCOPe 2.03: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.03
Class g: Small proteins [56992] (90 folds)
Fold g.21: Methylamine dehydrogenase, L chain [57560] (1 superfamily)
disulfide-rich; nearly all-beta
Superfamily g.21.1: Methylamine dehydrogenase, L chain [57561] (2 families)
Family g.21.1.1: Methylamine dehydrogenase, L chain [57562] (2 proteins)
automatically mapped to Pfam PF02975
Protein automated matches [190303] (2 species)
not a true protein

Species:

Paracoccus denitrificans [TaxId:266] [187112] (12 PDB entries)

Domains for 2gc4:

Domain d2gc4b_: 2gc4 B: [134935]
Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
automated match to d1mg2b_
complexed with cu, hem, na

Domain d2gc4f_: 2gc4 F: [134939]
Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
automated match to d1mg2b_
complexed with cu, hem, na

Domain d2gc4j_: 2gc4 J: [134943]
Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
automated match to d1mg2b_
complexed with cu, hem, na

Domain d2gc4n_: 2gc4 N: [134947]
Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
automated match to d1mg2b_
complexed with cu, hem, na

Domains for 2gc7:

Domain d2gc7b_: 2gc7 B: [134955]
Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
automated match to d1mg2b_
complexed with hem, na

Domain d2gc7f_: 2gc7 F: [134959]
Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
automated match to d1mg2b_
complexed with hem, na

Domain d2gc7j_: 2gc7 J: [134963]
Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
automated match to d1mg2b_
complexed with hem, na

Domain d2gc7n_: 2gc7 N: [134967]
Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
automated match to d1mg2b_
complexed with hem, na

Domain for 2j55:
- Domain d2j55m_: 2j55 M: [145649]
  Other proteins in same PDB: d2j55a_, d2j55b_, d2j55h1, d2j55j1, d2j55l1
  automated match to d1mg2b_
  complexed with cu, gol
Domains for 2j56:
1. Domain d2j56l_: 2j56 L: [145650]
  Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h1, d2j56j1
  automated match to d1mg2b_
  complexed with cu, gol, na
2. Domain d2j56m_: 2j56 M: [145651]
  Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h1, d2j56j1
  automated match to d1mg2b_
  complexed with cu, gol, na
Domains for 2j57:
1. Domain d2j57k_: 2j57 K: [145652]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
  automated match to d1mg2b_
  complexed with cu
2. Domain d2j57l_: 2j57 L: [145653]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
  automated match to d1mg2b_
  complexed with cu
3. Domain d2j57m_: 2j57 M: [145654]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
  automated match to d1mg2b_
  complexed with cu
4. Domain d2j57n_: 2j57 N: [145655]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
  automated match to d1mg2b_
  complexed with cu
Domains for 4fa1:
1. Domain d4fa1c_: 4fa1 C: [192921]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, mes, na
2. Domain d4fa1e_: 4fa1 E: [192651]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, mes, na
Domains for 4fa4:
1. Domain d4fa4c_: 4fa4 C: [192920]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, na, pge, po4
2. Domain d4fa4e_: 4fa4 E: [192649]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, na, pge, po4
Domains for 4fa5:
1. Domain d4fa5c_: 4fa5 C: [192653]
  automated match to d2bbkl_
  complexed with ca, edo, hec, mes, na
2. Domain d4fa5e_: 4fa5 E: [192923]
  automated match to d2bbkl_
  complexed with ca, edo, hec, mes, na
Domains for 4fa9:
1. Domain d4fa9c_: 4fa9 C: [192922]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, na, pge
2. Domain d4fa9e_: 4fa9 E: [192652]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, na, pge
Domains for 4fan:
1. Domain d4fanc_: 4fan C: [192648]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, mes, na, pge
2. Domain d4fane_: 4fan E: [192650]
  automated match to d2bbkl_
  complexed with act, ca, edo, hec, mes, na, pge
Domains for 4fav:
1. Domain d4favc_: 4fav C: [192924]
  automated match to d2bbkl_
  complexed with ca, edo, hec, mes, na, pge
2. Domain d4fave_: 4fav E: [192654]
  automated match to d2bbkl_
  complexed with ca, edo, hec, mes, na, pge
Domains for 4fb1:
1. Domain d4fb1c_: 4fb1 C: [192925]
  automated match to d2bbkl_
  complexed with ca, hec, mes, na
2. Domain d4fb1e_: 4fb1 E: [192672]
  automated match to d2bbkl_
  complexed with ca, hec, mes, na

Paracoccus denitrificans [TaxId:318586] [189284] (19 PDB entries)
1. Domains for 3l4m:
  1. Domain d3l4mc_: 3l4m C: [179938]
    Other proteins in same PDB: d3l4md_, d3l4mf_
    automated match to d1mg2b_
    complexed with 1pe, act, ca, hec, pg4
  2. Domain d3l4me_: 3l4m E: [179939]
    Other proteins in same PDB: d3l4md_, d3l4mf_
    automated match to d1mg2b_
    complexed with 1pe, act, ca, hec, pg4
2. Domains for 3l4o:
  1. Domain d3l4oc_: 3l4o C: [179940]
    Other proteins in same PDB: d3l4od_, d3l4of_
    automated match to d1mg2b_
    complexed with 1pe, act, ca, hec, pg4
  2. Domain d3l4oe_: 3l4o E: [179941]
    Other proteins in same PDB: d3l4od_, d3l4of_
    automated match to d1mg2b_
    complexed with 1pe, act, ca, hec, pg4
3. Domains for 3orv:
  1. Domain d3orvc_: 3orv C: [183251]
    Other proteins in same PDB: d3orvd_, d3orvf_
    automated match to d1mg2b_
    complexed with ca, edo, hec, p6g, peg, pg4, pge
  2. Domain d3orve_: 3orv E: [183252]
    Other proteins in same PDB: d3orvd_, d3orvf_
    automated match to d1mg2b_
    complexed with ca, edo, hec, p6g, peg, pg4, pge
4. Domains for 3pxs:
  1. Domain d3pxsc_: 3pxs C: [184065]
    Other proteins in same PDB: d3pxsd_, d3pxsf_
    automated match to d1mg2b_
    complexed with act, ca, hec, na, pg4, pg6
  2. Domain d3pxse_: 3pxs E: [184066]
    Other proteins in same PDB: d3pxsd_, d3pxsf_
    automated match to d1mg2b_
    complexed with act, ca, hec, na, pg4, pg6
5. Domains for 3pxt:
  1. Domain d3pxtc_: 3pxt C: [184067]
    Other proteins in same PDB: d3pxtd_, d3pxtf_
    automated match to d1mg2b_
    complexed with act, ca, cmo, hec, na, pg6
  2. Domain d3pxte_: 3pxt E: [184068]
    Other proteins in same PDB: d3pxtd_, d3pxtf_
    automated match to d1mg2b_
    complexed with act, ca, cmo, hec, na, pg6
6. Domains for 3pxw:
  1. Domain d3pxwc_: 3pxw C: [184070]
    automated match to d1mg2b_
    complexed with act, ca, edo, hec, na, no, pg6, pge
  2. Domain d3pxwe_: 3pxw E: [184071]
    automated match to d1mg2b_
    complexed with act, ca, edo, hec, na, no, pg6, pge
7. Domains for 3rlm:
  1. Domain d3rlmc_: 3rlm C: [185022]
    Other proteins in same PDB: d3rlmd_, d3rlmf_
    automated match to d1mg2b_
    complexed with act, ca, hec, pge
  2. Domain d3rlme_: 3rlm E: [185023]
    Other proteins in same PDB: d3rlmd_, d3rlmf_
    automated match to d1mg2b_
    complexed with act, ca, hec, pge
8. Domains for 3rmz:
  1. Domain d3rmzc_: 3rmz C: [185036]
    Other proteins in same PDB: d3rmzd_, d3rmzf_
    automated match to d1mg2b_
    complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
  2. Domain d3rmze_: 3rmz E: [185037]
    Other proteins in same PDB: d3rmzd_, d3rmzf_
    automated match to d1mg2b_
    complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
9. Domains for 3rn0:
  1. Domain d3rn0c_: 3rn0 C: [185038]
    Other proteins in same PDB: d3rn0d_, d3rn0f_
    automated match to d1mg2b_
    complexed with ca, hec, mes, na, p6g, pg4
  2. Domain d3rn0e_: 3rn0 E: [185039]
    Other proteins in same PDB: d3rn0d_, d3rn0f_
    automated match to d1mg2b_
    complexed with ca, hec, mes, na, p6g, pg4
10. Domains for 3rn1:
  1. Domain d3rn1c_: 3rn1 C: [191980]
    Other proteins in same PDB: d3rn1d_, d3rn1f_
    automated match to d2bbkl_
    complexed with 1pe, act, ca, edo, hec, na, pg4
  2. Domain d3rn1e_: 3rn1 E: [191981]
    Other proteins in same PDB: d3rn1d_, d3rn1f_
    automated match to d2bbkl_
    complexed with 1pe, act, ca, edo, hec, na, pg4
11. Domains for 3sjl:
  1. Domain d3sjlc_: 3sjl C: [192074]
    Other proteins in same PDB: d3sjld_, d3sjlf_
    automated match to d2bbkl_
    complexed with ca, edo, hec, mes, na, peg
  2. Domain d3sjle_: 3sjl E: [192075]
    Other proteins in same PDB: d3sjld_, d3sjlf_
    automated match to d2bbkl_
    complexed with ca, edo, hec, mes, na, peg
12. Domains for 3sle:
  1. Domain d3slec_: 3sle C: [192076]
    automated match to d2bbkl_
    complexed with act, ca, edo, hec
  2. Domain d3slee_: 3sle E: [192077]
    automated match to d2bbkl_
    complexed with act, ca, edo, hec
13. Domains for 3svw:
  1. Domain d3svwc_: 3svw C: [192085]
    Other proteins in same PDB: d3svwd_, d3svwf_
    automated match to d2bbkl_
    complexed with act, ca, edo, hec, mes, na, peg, pge
  2. Domain d3svwe_: 3svw E: [192086]
    Other proteins in same PDB: d3svwd_, d3svwf_
    automated match to d2bbkl_
    complexed with act, ca, edo, hec, mes, na, peg, pge
14. Domains for 3sws:
  1. Domain d3swsc_: 3sws C: [192088]
    Other proteins in same PDB: d3swsd_, d3swsf_
    automated match to d2bbkl_
    complexed with 1pe, act, ca, edo, hec, mes, na, pg4
  2. Domain d3swse_: 3sws E: [192089]
    Other proteins in same PDB: d3swsd_, d3swsf_
    automated match to d2bbkl_
    complexed with 1pe, act, ca, edo, hec, mes, na, pg4
15. Domains for 3sxt:
  1. Domain d3sxtc_: 3sxt C: [194900]
    Other proteins in same PDB: d3sxtd_, d3sxtf_
    automated match to d3rmzc_
    complexed with ca, edo, hec, na
  2. Domain d3sxte_: 3sxt E: [200733]
    Other proteins in same PDB: d3sxtd_, d3sxtf_
    automated match to d3sxtc_
    complexed with ca, edo, hec, na
16. Domains for 4k3i:
  1. Domain d4k3ic_: 4k3i C: [224139]
    automated match to d3sxtc_
    complexed with act, ca, edo, hec, na
  2. Domain d4k3ie_: 4k3i E: [224140]
    automated match to d3sxtc_
    complexed with act, ca, edo, hec, na
17. Domains for 4l1q:
  1. Domain d4l1qc_: 4l1q C: [227759]
    automated match to d3rlmc_
    complexed with ca, edo, hec, mes, na
  2. Domain d4l1qe_: 4l1q E: [227758]
    automated match to d3l4oc_
    complexed with ca, edo, hec, mes, na
18. Domains for 4l3g:
  1. Domain d4l3gc_: 4l3g C: [227761]
    automated match to d3l4oc_
    complexed with act, ca, hec, na, pge
  2. Domain d4l3ge_: 4l3g E: [227760]
    automated match to d3l4oc_
    complexed with act, ca, hec, na, pge
19. Domains for 4l3h:
  1. Domain d4l3hc_: 4l3h C: [227764]
    automated match to d3rlmc_
    complexed with ca, edo, hec, mes, na, pge
  2. Domain d4l3he_: 4l3h E: [227762]
    automated match to d3l4oc_
    complexed with ca, edo, hec, mes, na, pge

More info for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain

Timeline for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain:

Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain first appeared in SCOPe 2.01
Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain appears in SCOPe 2.02
Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain appears in SCOPe 2.04
Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain appears in the current release, SCOPe 2.08