Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1239924Class g: Small proteins [56992] (90 folds)
  3. 1243277Fold g.21: Methylamine dehydrogenase, L chain [57560] (1 superfamily)
    disulfide-rich; nearly all-beta
  4. 1243278Superfamily g.21.1: Methylamine dehydrogenase, L chain [57561] (2 families) (S)
  5. 1243279Family g.21.1.1: Methylamine dehydrogenase, L chain [57562] (2 proteins)
  6. 1243300Protein automated matches [190303] (2 species)
    not a true protein

Species:

  1. 1243301Paracoccus denitrificans [TaxId:266] [187112] (12 PDB entries)
    1. Domains for 2gc4:
      1. 1243308Domain d2gc4b_: 2gc4 B: [134935]
        Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      2. 1243309Domain d2gc4f_: 2gc4 F: [134939]
        Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      3. 1243310Domain d2gc4j_: 2gc4 J: [134943]
        Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
      4. 1243311Domain d2gc4n_: 2gc4 N: [134947]
        Other proteins in same PDB: d2gc4a1, d2gc4c_, d2gc4d_, d2gc4e1, d2gc4g_, d2gc4h_, d2gc4i1, d2gc4k_, d2gc4l_, d2gc4m1, d2gc4o_, d2gc4p_
        automated match to d1mg2b_
        complexed with cu, hem, na
    2. Domains for 2gc7:
      1. 1243304Domain d2gc7b_: 2gc7 B: [134955]
        Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      2. 1243305Domain d2gc7f_: 2gc7 F: [134959]
        Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      3. 1243306Domain d2gc7j_: 2gc7 J: [134963]
        Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
      4. 1243307Domain d2gc7n_: 2gc7 N: [134967]
        Other proteins in same PDB: d2gc7a1, d2gc7c_, d2gc7d_, d2gc7e1, d2gc7g_, d2gc7h_, d2gc7i1, d2gc7k_, d2gc7l_, d2gc7m1, d2gc7o_, d2gc7p_
        automated match to d1mg2b_
        complexed with hem, na
    3. Domain for 2j55:
    4. Domains for 2j56:
      1. 1243312Domain d2j56l_: 2j56 L: [145650]
        Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h1, d2j56j1
        automated match to d1mg2b_
        complexed with cu, gol, na
      2. 1243313Domain d2j56m_: 2j56 M: [145651]
        Other proteins in same PDB: d2j56a_, d2j56b_, d2j56h1, d2j56j1
        automated match to d1mg2b_
        complexed with cu, gol, na
    5. Domains for 2j57:
      1. 1243326Domain d2j57k_: 2j57 K: [145652]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
        automated match to d1mg2b_
        complexed with cu
      2. 1243327Domain d2j57l_: 2j57 L: [145653]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
        automated match to d1mg2b_
        complexed with cu
      3. 1243328Domain d2j57m_: 2j57 M: [145654]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
        automated match to d1mg2b_
        complexed with cu
      4. 1243329Domain d2j57n_: 2j57 N: [145655]
        Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57g1, d2j57h1, d2j57i1, d2j57j1
        automated match to d1mg2b_
        complexed with cu
    6. Domains for 4fa1:
      1. 1243324Domain d4fa1c_: 4fa1 C: [192921]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na
      2. 1243325Domain d4fa1e_: 4fa1 E: [192651]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na
    7. Domains for 4fa4:
      1. 1243320Domain d4fa4c_: 4fa4 C: [192920]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge, po4
      2. 1243321Domain d4fa4e_: 4fa4 E: [192649]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge, po4
    8. Domains for 4fa5:
      1. 1243302Domain d4fa5c_: 4fa5 C: [192653]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na
      2. 1243303Domain d4fa5e_: 4fa5 E: [192923]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na
    9. Domains for 4fa9:
      1. 1243314Domain d4fa9c_: 4fa9 C: [192922]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge
      2. 1243315Domain d4fa9e_: 4fa9 E: [192652]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, na, pge
    10. Domains for 4fan:
      1. 1243318Domain d4fanc_: 4fan C: [192648]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, pge
      2. 1243319Domain d4fane_: 4fan E: [192650]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, pge
    11. Domains for 4fav:
      1. 1243316Domain d4favc_: 4fav C: [192924]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, pge
      2. 1243317Domain d4fave_: 4fav E: [192654]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, pge
    12. Domains for 4fb1:
      1. 1243322Domain d4fb1c_: 4fb1 C: [192925]
        automated match to d2bbkl_
        complexed with ca, hec, mes, na
      2. 1243323Domain d4fb1e_: 4fb1 E: [192672]
        automated match to d2bbkl_
        complexed with ca, hec, mes, na
  2. 1243331Paracoccus denitrificans [TaxId:318586] [189284] (15 PDB entries)
    1. Domains for 3l4m:
      1. 1243345Domain d3l4mc_: 3l4m C: [179938]
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
      2. 1243346Domain d3l4me_: 3l4m E: [179939]
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
    2. Domains for 3l4o:
      1. 1243349Domain d3l4oc_: 3l4o C: [179940]
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
      2. 1243350Domain d3l4oe_: 3l4o E: [179941]
        automated match to d1mg2b_
        complexed with 1pe, act, ca, hec, pg4
    3. Domains for 3orv:
      1. 1243341Domain d3orvc_: 3orv C: [183251]
        automated match to d1mg2b_
        complexed with ca, edo, hec, p6g, peg, pg4, pge
      2. 1243342Domain d3orve_: 3orv E: [183252]
        automated match to d1mg2b_
        complexed with ca, edo, hec, p6g, peg, pg4, pge
    4. Domains for 3pxs:
      1. 1243357Domain d3pxsc_: 3pxs C: [184065]
        automated match to d1mg2b_
        complexed with act, ca, hec, na, pg4, pg6
      2. 1243358Domain d3pxse_: 3pxs E: [184066]
        automated match to d1mg2b_
        complexed with act, ca, hec, na, pg4, pg6
    5. Domains for 3pxt:
      1. 1243353Domain d3pxtc_: 3pxt C: [184067]
        automated match to d1mg2b_
        complexed with act, ca, cmo, hec, na, pg6
      2. 1243354Domain d3pxte_: 3pxt E: [184068]
        automated match to d1mg2b_
        complexed with act, ca, cmo, hec, na, pg6
    6. Domains for 3pxw:
      1. 1243351Domain d3pxwc_: 3pxw C: [184070]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, na, no, pg6, pge
      2. 1243352Domain d3pxwe_: 3pxw E: [184071]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, na, no, pg6, pge
    7. Domains for 3rlm:
      1. 1243355Domain d3rlmc_: 3rlm C: [185022]
        automated match to d1mg2b_
        complexed with act, ca, hec, pge
      2. 1243356Domain d3rlme_: 3rlm E: [185023]
        automated match to d1mg2b_
        complexed with act, ca, hec, pge
    8. Domains for 3rmz:
      1. 1243334Domain d3rmzc_: 3rmz C: [185036]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
      2. 1243335Domain d3rmze_: 3rmz E: [185037]
        automated match to d1mg2b_
        complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
    9. Domains for 3rn0:
      1. 1243347Domain d3rn0c_: 3rn0 C: [185038]
        automated match to d1mg2b_
        complexed with ca, hec, mes, na, p6g, pg4
      2. 1243348Domain d3rn0e_: 3rn0 E: [185039]
        automated match to d1mg2b_
        complexed with ca, hec, mes, na, p6g, pg4
    10. Domains for 3rn1:
      1. 1243343Domain d3rn1c_: 3rn1 C: [191980]
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, na, pg4
      2. 1243344Domain d3rn1e_: 3rn1 E: [191981]
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, na, pg4
    11. Domains for 3sjl:
      1. 1243332Domain d3sjlc_: 3sjl C: [192074]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, peg
      2. 1243333Domain d3sjle_: 3sjl E: [192075]
        automated match to d2bbkl_
        complexed with ca, edo, hec, mes, na, peg
    12. Domains for 3sle:
      1. 1243359Domain d3slec_: 3sle C: [192076]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec
      2. 1243360Domain d3slee_: 3sle E: [192077]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec
    13. Domains for 3svw:
      1. 1243337Domain d3svwc_: 3svw C: [192085]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, peg, pge
      2. 1243338Domain d3svwe_: 3svw E: [192086]
        automated match to d2bbkl_
        complexed with act, ca, edo, hec, mes, na, peg, pge
    14. Domains for 3sws:
      1. 1243339Domain d3swsc_: 3sws C: [192088]
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, mes, na, pg4
      2. 1243340Domain d3swse_: 3sws E: [192089]
        automated match to d2bbkl_
        complexed with 1pe, act, ca, edo, hec, mes, na, pg4
    15. Domain for 3sxt:

More info for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain

Timeline for Protein automated matches from g.21.1.1: Methylamine dehydrogenase, L chain: