Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2500487Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2500488Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2501329Family c.66.1.25: mRNA cap methylase [88785] (3 proteins)
  6. 2501374Protein automated matches [190302] (8 species)
    not a true protein

Species:

  1. 2501375Dengue virus 2 16681-pdk53 [TaxId:31635] [188733] (1 PDB entry)
  2. 2501377Dengue virus 3 [TaxId:11069] [189561] (2 PDB entries)
    1. Domains for 3p8z:
      1. 2501380Domain d3p8za_: 3p8z A: [183595]
        automated match to d1r6aa_
        protein/RNA complex; complexed with 36a, sah
      2. 2501381Domain d3p8zc_: 3p8z C: [183596]
        automated match to d1r6aa_
        protein/RNA complex; complexed with 36a, sah
    2. Domains for 3p97:
      1. 2501378Domain d3p97a_: 3p97 A: [183601]
        automated match to d1r6aa_
        complexed with sam
      2. 2501379Domain d3p97c_: 3p97 C: [183602]
        automated match to d1r6aa_
        complexed with sam
  3. 2501382Dengue virus type 3 (strain philippines/h87/1956) [TaxId:408870] [324448] (1 PDB entry)
  4. 2501385Dengue virus [TaxId:12637] [189508] (1 PDB entry)
  5. 2501390Vaccinia virus [TaxId:10245] [187111] (2 PDB entries)
    1. Domain for 2ga9:
    2. Domain for 2gaf:
  6. 2501393West Nile virus [TaxId:11082] [187969] (2 PDB entries)
    1. Domains for 2oy0:
      1. 2501396Domain d2oy0a_: 2oy0 A: [166919]
        automated match to d1r6aa_
        complexed with sah
      2. 2501397Domain d2oy0b_: 2oy0 B: [166920]
        automated match to d1r6aa_
        complexed with sah
    2. Domains for 3lkz:
      1. 2501394Domain d3lkza_: 3lkz A: [247469]
        automated match to d2px8b_
        complexed with gol, sfg
      2. 2501395Domain d3lkzb_: 3lkz B: [247470]
        automated match to d2px8b_
        complexed with gol, sfg
  7. 2501398Zika virus (strain mr 766) [TaxId:64320] [322798] (8 PDB entries)
    1. Domain for 5kqs:
    2. Domains for 5mrk:
      1. 2501403Domain d5mrka_: 5mrk A: [329041]
        automated match to d2xbma_
        complexed with cl, sfg
      2. 2501404Domain d5mrkb_: 5mrk B: [329023]
        automated match to d2xbma_
        complexed with cl, sfg
    3. Domains for 5njv:
      1. 2501405Domain d5njva_: 5njv A: [346916]
        automated match to d5wxba_
        complexed with cl, sam
      2. 2501406Domain d5njvb_: 5njv B: [347112]
        automated match to d5wxba_
        complexed with cl, sam
      3. 2501407Domain d5njvc_: 5njv C: [347073]
        automated match to d5wxba_
      4. 2501408Domain d5njvd_: 5njv D: [347207]
        automated match to d5wxba_
        complexed with cl, sam
    4. Domains for 5ulp:
      1. 2501400Domain d5ulpa_: 5ulp A: [334300]
        automated match to d2xbma_
        complexed with cl, ipa, kb1, na, ure
      2. 2501401Domain d5ulpb_: 5ulp B: [334284]
        automated match to d2xbma_
        complexed with cl, ipa, kb1, na, ure
    5. Domains for 5vim:
      1. 2501409Domain d5vima_: 5vim A: [338711]
        Other proteins in same PDB: d5vimb2
        automated match to d2px8a_
        complexed with sam, so4
      2. 2501410Domain d5vimb1: 5vim B:5-265 [338720]
        Other proteins in same PDB: d5vimb2
        automated match to d2px8a_
        complexed with sam, so4
    6. Domain for 5wxb:
    7. Domains for 5wz1:
      1. 2501411Domain d5wz1a_: 5wz1 A: [330938]
        automated match to d2px5a_
        complexed with sam
      2. 2501412Domain d5wz1b_: 5wz1 B: [330951]
        automated match to d2px5a_
        complexed with sam
      3. 2501413Domain d5wz1c_: 5wz1 C: [330861]
        automated match to d2px5a_
        complexed with sam
      4. 2501414Domain d5wz1d_: 5wz1 D: [330950]
        automated match to d2px5a_
        complexed with sam
      5. 2501415Domain d5wz1e_: 5wz1 E: [330873]
        automated match to d2px5a_
        complexed with sam
      6. 2501416Domain d5wz1f_: 5wz1 F: [330872]
        automated match to d2px5a_
        complexed with sam
      7. 2501417Domain d5wz1g_: 5wz1 G: [330867]
        automated match to d2px5a_
        complexed with sam
      8. 2501418Domain d5wz1h_: 5wz1 H: [330882]
        automated match to d2px5a_
        complexed with sam
    8. Domains for 5wz2:
      1. 2501419Domain d5wz2a_: 5wz2 A: [330926]
        automated match to d2px5a_
        complexed with gta, sam
      2. 2501420Domain d5wz2b_: 5wz2 B: [330896]
        automated match to d2px5a_
        complexed with gta, sam
      3. 2501421Domain d5wz2c_: 5wz2 C: [330948]
        automated match to d2px5a_
        complexed with gta, sam
  8. 2501422Zika virus [TaxId:64320] [322811] (3 PDB entries)
    1. Domain for 5kqr:
    2. Domains for 5m5b:
      1. 2501424Domain d5m5ba_: 5m5b A: [327661]
        automated match to d2px8b_
        complexed with cl, gol, sam, so4
      2. 2501425Domain d5m5bb_: 5m5b B: [327664]
        automated match to d2px8b_
        complexed with cl, gol, sam, so4
    3. Domains for 5nju:
      1. 2501426Domain d5njua_: 5nju A: [346877]
        automated match to d5wxba_
        complexed with mg, sah
      2. 2501427Domain d5njub_: 5nju B: [346902]
        automated match to d5wxba_
        complexed with mg, sah

More info for Protein automated matches from c.66.1.25: mRNA cap methylase

Timeline for Protein automated matches from c.66.1.25: mRNA cap methylase: